RNA–Protein interactions for RNA: ENST00000485499.1

PTPRT-208, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 3

Gene PTPRT, Length 208 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-208ENST00000485499 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
PTPRT-208ENST00000485499 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
PTPRT-208ENST00000485499 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
PTPRT-208ENST00000485499 FKBP8Q14318 412 aa13.17□□□□□ -0.3
PTPRT-208ENST00000485499 POTEGQ6S5H5 508 aa13.14□□□□□ -0.31
PTPRT-208ENST00000485499 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
PTPRT-208ENST00000485499 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
PTPRT-208ENST00000485499 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
PTPRT-208ENST00000485499 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
PTPRT-208ENST00000485499 PROM2Q8N271 834 aa13.05□□□□□ -0.32
PTPRT-208ENST00000485499 PELP1Q8IZL8 1130 aaKnown RBP12.97□□□□□ -0.33
PTPRT-208ENST00000485499 CUX2O14529 1486 aa12.97□□□□□ -0.33
PTPRT-208ENST00000485499 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
PTPRT-208ENST00000485499 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
PTPRT-208ENST00000485499 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
PTPRT-208ENST00000485499 POTEJP0CG39 1038 aa12.88□□□□□ -0.35
PTPRT-208ENST00000485499 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
PTPRT-208ENST00000485499 MAMSTRQ6ZN01 415 aa12.88□□□□□ -0.35
PTPRT-208ENST00000485499 C7P10643 843 aa12.87□□□□□ -0.35
PTPRT-208ENST00000485499 LCE2DQ5TA82 110 aaPredicted RBP12.86□□□□□ -0.35
PTPRT-208ENST00000485499 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
PTPRT-208ENST00000485499 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
PTPRT-208ENST00000485499 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
PTPRT-208ENST00000485499 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
PTPRT-208ENST00000485499 DCAF1Q9Y4B6 1507 aa12.83□□□□□ -0.36
PTPRT-208ENST00000485499 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
PTPRT-208ENST00000485499 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
PTPRT-208ENST00000485499 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTPRT-208ENST00000485499 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
PTPRT-208ENST00000485499 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
PTPRT-208ENST00000485499 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
PTPRT-208ENST00000485499 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
PTPRT-208ENST00000485499 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
PTPRT-208ENST00000485499 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
PTPRT-208ENST00000485499 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
PTPRT-208ENST00000485499 KIF21AQ7Z4S6 1674 aa12.59□□□□□ -0.39
PTPRT-208ENST00000485499 POTEFA5A3E0 1075 aa12.59□□□□□ -0.39
PTPRT-208ENST00000485499 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
PTPRT-208ENST00000485499 PLEKHG5O94827 1062 aa12.58□□□□□ -0.4
PTPRT-208ENST00000485499 NESP48681 1621 aa12.56□□□□□ -0.4
PTPRT-208ENST00000485499 MIER1Q8N108 512 aa12.56□□□□□ -0.4
PTPRT-208ENST00000485499 CDAN1Q8IWY9 1227 aa12.55□□□□□ -0.4
PTPRT-208ENST00000485499 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
PTPRT-208ENST00000485499 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
PTPRT-208ENST00000485499 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
PTPRT-208ENST00000485499 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
PTPRT-208ENST00000485499 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
PTPRT-208ENST00000485499 ZBTB47Q9UFB7 747 aaPredicted RBP12.49□□□□□ -0.41
PTPRT-208ENST00000485499 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
PTPRT-208ENST00000485499 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
PTPRT-208ENST00000485499 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
PTPRT-208ENST00000485499 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
PTPRT-208ENST00000485499 TIE1P35590 1138 aa12.45□□□□□ -0.42
PTPRT-208ENST00000485499 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
PTPRT-208ENST00000485499 TRPC6Q9Y210 931 aa12.41□□□□□ -0.42
PTPRT-208ENST00000485499 COLQQ9Y215 455 aaPredicted RBP12.41□□□□□ -0.42
PTPRT-208ENST00000485499 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.43
PTPRT-208ENST00000485499 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
PTPRT-208ENST00000485499 IFNLR1Q8IU57 520 aaPredicted RBP12.37□□□□□ -0.43
PTPRT-208ENST00000485499 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
PTPRT-208ENST00000485499 SEC24BO95487 1268 aa12.36□□□□□ -0.43
PTPRT-208ENST00000485499 MAP3K13O43283 966 aa12.35□□□□□ -0.43
PTPRT-208ENST00000485499 TTLL13PA6NNM8 815 aa12.34□□□□□ -0.43
PTPRT-208ENST00000485499 ST18O60284 1047 aa12.34□□□□□ -0.43
PTPRT-208ENST00000485499 IER5LQ5T953 404 aa12.34□□□□□ -0.43
PTPRT-208ENST00000485499 RIMBP3CA6NJZ7 1639 aa12.31□□□□□ -0.44
PTPRT-208ENST00000485499 RIMBP3BA6NNM3 1639 aa12.31□□□□□ -0.44
PTPRT-208ENST00000485499 RIMBP3Q9UFD9 1639 aa12.31□□□□□ -0.44
PTPRT-208ENST00000485499 MMRN1Q13201 1228 aa12.31□□□□□ -0.44
PTPRT-208ENST00000485499 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
PTPRT-208ENST00000485499 WDR62O43379 1518 aa12.28□□□□□ -0.44
PTPRT-208ENST00000485499 SPNS2Q8IVW8 549 aa12.28□□□□□ -0.44
PTPRT-208ENST00000485499 SPOCK2Q92563 424 aa12.28□□□□□ -0.44
PTPRT-208ENST00000485499 SLAIN1Q8ND83 568 aa12.27□□□□□ -0.45
PTPRT-208ENST00000485499 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
PTPRT-208ENST00000485499 NUBP1P53384 320 aa12.24□□□□□ -0.45
PTPRT-208ENST00000485499 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
PTPRT-208ENST00000485499 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
PTPRT-208ENST00000485499 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
PTPRT-208ENST00000485499 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
PTPRT-208ENST00000485499 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
PTPRT-208ENST00000485499 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
PTPRT-208ENST00000485499 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
PTPRT-208ENST00000485499 GSE1Q14687 1217 aa12.14□□□□□ -0.47
PTPRT-208ENST00000485499 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
PTPRT-208ENST00000485499 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
PTPRT-208ENST00000485499 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
PTPRT-208ENST00000485499 CEP164Q9UPV0 1460 aa12.1□□□□□ -0.47
PTPRT-208ENST00000485499 SNPHO15079 494 aa12.1□□□□□ -0.47
PTPRT-208ENST00000485499 PLCG2P16885 1265 aa12.1□□□□□ -0.47
PTPRT-208ENST00000485499 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
PTPRT-208ENST00000485499 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
PTPRT-208ENST00000485499 CHD1O14646 1710 aa12.06□□□□□ -0.48
PTPRT-208ENST00000485499 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
PTPRT-208ENST00000485499 IFNL1Q8IU54 200 aa12.05□□□□□ -0.48
PTPRT-208ENST00000485499 TMEM106CQ9BVX2 250 aa12.05□□□□□ -0.48
PTPRT-208ENST00000485499 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
PTPRT-208ENST00000485499 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
PTPRT-208ENST00000485499 MARVELD3Q96A59 401 aa12.01□□□□□ -0.49
PTPRT-208ENST00000485499 FANCD2Q9BXW9 1451 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms