RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 ABCC10Q5T3U5 1492 aa22.31■■□□□ 1.16
PABPC4-215ENST00000484555 RUSC2Q8N2Y8 1516 aa22.3■■□□□ 1.16
PABPC4-215ENST00000484555 MAPKBP1O60336 1514 aa22.29■■□□□ 1.16
PABPC4-215ENST00000484555 NPM1P06748 294 aaKnown RBP eCLIP22.28■■□□□ 1.16
PABPC4-215ENST00000484555 FAM69CQ0P6D2 419 aa22.27■■□□□ 1.16
PABPC4-215ENST00000484555 DIP2BQ9P265 1576 aa22.21■■□□□ 1.15
PABPC4-215ENST00000484555 ADCY10Q96PN6 1610 aa22.2■■□□□ 1.15
PABPC4-215ENST00000484555 KIAA0586Q9BVV6 1533 aa22.19■■□□□ 1.14
PABPC4-215ENST00000484555 IGF1RP08069 1367 aa22.15■■□□□ 1.14
PABPC4-215ENST00000484555 KDM6BO15054 1643 aa22.09■■□□□ 1.13
PABPC4-215ENST00000484555 CUL7Q14999 1698 aa22.09■■□□□ 1.13
PABPC4-215ENST00000484555 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
PABPC4-215ENST00000484555 KDM4FA0A1W2PPD8 638 aa22.08■■□□□ 1.13
PABPC4-215ENST00000484555 PTPRGP23470 1445 aa22.04■■□□□ 1.12
PABPC4-215ENST00000484555 TSPOAP1O95153 1857 aa22.02■■□□□ 1.12
PABPC4-215ENST00000484555 CARMIL1Q5VZK9 1371 aa21.98■■□□□ 1.11
PABPC4-215ENST00000484555 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
PABPC4-215ENST00000484555 ABCC2Q92887 1545 aa21.97■■□□□ 1.11
PABPC4-215ENST00000484555 CARMIL2Q6F5E8 1435 aa21.97■■□□□ 1.11
PABPC4-215ENST00000484555 GLI2P10070 1586 aa21.95■■□□□ 1.1
PABPC4-215ENST00000484555 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
PABPC4-215ENST00000484555 UHRF1BP1LA0JNW5 1464 aa21.92■■□□□ 1.1
PABPC4-215ENST00000484555 ASXL2Q76L83 1435 aa21.91■■□□□ 1.1
PABPC4-215ENST00000484555 PPRC1Q5VV67 1664 aaKnown RBP21.89■■□□□ 1.1
PABPC4-215ENST00000484555 IQGAP2Q13576 1575 aa21.89■■□□□ 1.09
PABPC4-215ENST00000484555 UACAQ9BZF9 1416 aa21.87■■□□□ 1.09
PABPC4-215ENST00000484555 TTBK1Q5TCY1 1321 aaPredicted RBP21.86■■□□□ 1.09
PABPC4-215ENST00000484555 DISP1Q96F81 1524 aa21.84■■□□□ 1.09
PABPC4-215ENST00000484555 KDM5BQ9UGL1 1544 aa21.82■■□□□ 1.08
PABPC4-215ENST00000484555 EPRSP07814 1512 aaKnown RBP21.8■■□□□ 1.08
PABPC4-215ENST00000484555 COL17A1Q9UMD9 1497 aaPredicted RBP21.78■■□□□ 1.08
PABPC4-215ENST00000484555 MAP3K4Q9Y6R4 1608 aa21.78■■□□□ 1.08
PABPC4-215ENST00000484555 ADGRL1O94910 1474 aa21.77■■□□□ 1.08
PABPC4-215ENST00000484555 UGGT2Q9NYU1 1516 aa21.77■■□□□ 1.08
PABPC4-215ENST00000484555 TEX14Q8IWB6 1497 aa21.75■■□□□ 1.07
PABPC4-215ENST00000484555 ILDR1Q86SU0 546 aaPredicted RBP21.74■■□□□ 1.07
PABPC4-215ENST00000484555 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
PABPC4-215ENST00000484555 ZCCHC11Q5TAX3 1644 aaKnown RBP21.72■■□□□ 1.07
PABPC4-215ENST00000484555 KIAA0556O60303 1618 aa21.69■■□□□ 1.06
PABPC4-215ENST00000484555 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.06
PABPC4-215ENST00000484555 MAGI3Q5TCQ9 1506 aa21.6■■□□□ 1.05
PABPC4-215ENST00000484555 HECW2Q9P2P5 1572 aa21.59■■□□□ 1.05
PABPC4-215ENST00000484555 CD109Q6YHK3 1445 aa21.56■■□□□ 1.04
PABPC4-215ENST00000484555 GOLGA3Q08378 1498 aa21.56■■□□□ 1.04
PABPC4-215ENST00000484555 CFAP43Q8NDM7 1665 aa21.56■■□□□ 1.04
PABPC4-215ENST00000484555 CTTNBP2Q8WZ74 1663 aa21.54■■□□□ 1.04
PABPC4-215ENST00000484555 ABCA8O94911 1581 aa21.54■■□□□ 1.04
PABPC4-215ENST00000484555 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
PABPC4-215ENST00000484555 PRXQ9BXM0 1461 aa21.44■■□□□ 1.02
PABPC4-215ENST00000484555 ARAP3Q8WWN8 1544 aa21.44■■□□□ 1.02
PABPC4-215ENST00000484555 PHLDB1Q86UU1 1377 aa21.38■■□□□ 1.01
PABPC4-215ENST00000484555 KIF21BO75037 1637 aa21.38■■□□□ 1.01
PABPC4-215ENST00000484555 ATP10BO94823 1461 aa21.37■■□□□ 1.01
PABPC4-215ENST00000484555 FAM9AQ8IZU1 332 aaPredicted RBP21.36■■□□□ 1.01
PABPC4-215ENST00000484555 ABCA9Q8IUA7 1624 aa21.33■■□□□ 1.01
PABPC4-215ENST00000484555 ADAMTSL3P82987 1691 aa21.3■■□□□ 1
PABPC4-215ENST00000484555 NEO1Q92859 1461 aa21.28■■□□□ 1
PABPC4-215ENST00000484555 PTPRMP28827 1452 aa21.27■■□□□ 1
PABPC4-215ENST00000484555 ARID3CA6NKF2 412 aa21.27■■□□□ 1
PABPC4-215ENST00000484555 P3H3Q8IVL6 736 aa21.27■■□□□ 1
PABPC4-215ENST00000484555 FBXO41Q8TF61 875 aa21.27■■□□□ 1
PABPC4-215ENST00000484555 RAPGEF3O95398 923 aa21.25■□□□□ 0.99
PABPC4-215ENST00000484555 SAMD9Q5K651 1589 aa21.24■□□□□ 0.99
PABPC4-215ENST00000484555 RAPGEF6Q8TEU7 1601 aa21.22■□□□□ 0.99
PABPC4-215ENST00000484555 BCORL1Q5H9F3 1711 aa21.2■□□□□ 0.98
PABPC4-215ENST00000484555 FRMPD1Q5SYB0 1578 aa21.19■□□□□ 0.98
PABPC4-215ENST00000484555 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
PABPC4-215ENST00000484555 NUP153P49790 1475 aaKnown RBP21.15■□□□□ 0.98
PABPC4-215ENST00000484555 MADDQ8WXG6 1647 aa21.14■□□□□ 0.97
PABPC4-215ENST00000484555 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
PABPC4-215ENST00000484555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.13■□□□□ 0.97
PABPC4-215ENST00000484555 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
PABPC4-215ENST00000484555 ARID4BQ4LE39 1312 aaPredicted RBP21.12■□□□□ 0.97
PABPC4-215ENST00000484555 LMTK3Q96Q04 1460 aa21.12■□□□□ 0.97
PABPC4-215ENST00000484555 ARHGEF40Q8TER5 1519 aa21.1■□□□□ 0.97
PABPC4-215ENST00000484555 DENND4BO75064 1496 aaPredicted RBP21.1■□□□□ 0.97
PABPC4-215ENST00000484555 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
PABPC4-215ENST00000484555 FHOD3Q2V2M9 1422 aa21.09■□□□□ 0.97
PABPC4-215ENST00000484555 RICTORQ6R327 1708 aa21.09■□□□□ 0.97
PABPC4-215ENST00000484555 AKNAQ7Z591 1439 aa21.08■□□□□ 0.97
PABPC4-215ENST00000484555 CFAP74Q9C0B2 1584 aa21.05■□□□□ 0.96
PABPC4-215ENST00000484555 FANCAO15360 1455 aa21.04■□□□□ 0.96
PABPC4-215ENST00000484555 RIMS1Q86UR5 1692 aaKnown RBP21.03■□□□□ 0.96
PABPC4-215ENST00000484555 ZMYM4Q5VZL5 1548 aa21.03■□□□□ 0.96
PABPC4-215ENST00000484555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.03■□□□□ 0.96
PABPC4-215ENST00000484555 EEA1Q15075 1411 aa21.03■□□□□ 0.96
PABPC4-215ENST00000484555 POGZQ7Z3K3 1410 aa21.02■□□□□ 0.96
PABPC4-215ENST00000484555 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
PABPC4-215ENST00000484555 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
PABPC4-215ENST00000484555 ZFYVE16Q7Z3T8 1539 aa20.97■□□□□ 0.95
PABPC4-215ENST00000484555 TTC37Q6PGP7 1564 aa20.97■□□□□ 0.95
PABPC4-215ENST00000484555 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
PABPC4-215ENST00000484555 YEATS2Q9ULM3 1422 aa20.95■□□□□ 0.95
PABPC4-215ENST00000484555 SIGLEC1Q9BZZ2 1709 aa20.95■□□□□ 0.94
PABPC4-215ENST00000484555 HSPA2P54652 639 aa20.94■□□□□ 0.94
PABPC4-215ENST00000484555 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
PABPC4-215ENST00000484555 PLCH2O75038 1416 aa20.92■□□□□ 0.94
PABPC4-215ENST00000484555 SCAPERQ9BY12 1400 aa20.9■□□□□ 0.94
PABPC4-215ENST00000484555 CDK13Q14004 1512 aaKnown RBP20.88■□□□□ 0.93
PABPC4-215ENST00000484555 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms