RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
SND1-210ENST00000483503 MAP3K1Q13233 1512 aa18.17■□□□□ 0.5
SND1-210ENST00000483503 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
SND1-210ENST00000483503 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
SND1-210ENST00000483503 THOC2Q8NI27 1593 aaKnown RBP18.1■□□□□ 0.49
SND1-210ENST00000483503 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
SND1-210ENST00000483503 AQRO60306 1485 aaKnown RBP eCLIP18.08■□□□□ 0.494e-8■■■■□ 24.1
SND1-210ENST00000483503 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
SND1-210ENST00000483503 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
SND1-210ENST00000483503 FYCO1Q9BQS8 1478 aa18.05■□□□□ 0.48
SND1-210ENST00000483503 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
SND1-210ENST00000483503 CASKIN1Q8WXD9 1431 aa18.03■□□□□ 0.48
SND1-210ENST00000483503 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.48
SND1-210ENST00000483503 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
SND1-210ENST00000483503 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.48
SND1-210ENST00000483503 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
SND1-210ENST00000483503 PCF11O94913 1555 aaKnown RBP18■□□□□ 0.47
SND1-210ENST00000483503 CFAP43Q8NDM7 1665 aa17.99■□□□□ 0.47
SND1-210ENST00000483503 EIF4G3O43432 1585 aaKnown RBP17.99■□□□□ 0.47
SND1-210ENST00000483503 RRBP1Q9P2E9 1410 aaKnown RBP17.98■□□□□ 0.47
SND1-210ENST00000483503 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
SND1-210ENST00000483503 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
SND1-210ENST00000483503 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
SND1-210ENST00000483503 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
SND1-210ENST00000483503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
SND1-210ENST00000483503 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
SND1-210ENST00000483503 HNRNPUL2Q1KMD3 747 aaKnown RBP17.93■□□□□ 0.46
SND1-210ENST00000483503 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
SND1-210ENST00000483503 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
SND1-210ENST00000483503 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
SND1-210ENST00000483503 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
SND1-210ENST00000483503 ATP1B4Q9UN42 357 aaPredicted RBP17.89■□□□□ 0.45
SND1-210ENST00000483503 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
SND1-210ENST00000483503 CCDC18Q5T9S5 1454 aa17.84■□□□□ 0.45
SND1-210ENST00000483503 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
SND1-210ENST00000483503 HECW1Q76N89 1606 aa17.82■□□□□ 0.44
SND1-210ENST00000483503 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
SND1-210ENST00000483503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.79■□□□□ 0.44
SND1-210ENST00000483503 PHLDB1Q86UU1 1377 aa17.78■□□□□ 0.44
SND1-210ENST00000483503 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.44
SND1-210ENST00000483503 KIAA0556O60303 1618 aa17.77■□□□□ 0.44
SND1-210ENST00000483503 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
SND1-210ENST00000483503 NUP160Q12769 1436 aa17.76■□□□□ 0.43
SND1-210ENST00000483503 DISP1Q96F81 1524 aa17.74■□□□□ 0.43
SND1-210ENST00000483503 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
SND1-210ENST00000483503 CARMIL2Q6F5E8 1435 aa17.72■□□□□ 0.43
SND1-210ENST00000483503 SUPT6HQ7KZ85 1726 aaKnown RBP17.72■□□□□ 0.43
SND1-210ENST00000483503 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
SND1-210ENST00000483503 FBLN2P98095 1184 aa17.71■□□□□ 0.43
SND1-210ENST00000483503 EPRSP07814 1512 aaKnown RBP17.7■□□□□ 0.42
SND1-210ENST00000483503 FAM50AQ14320 339 aaKnown RBP17.69■□□□□ 0.42
SND1-210ENST00000483503 FGD6Q6ZV73 1430 aa17.68■□□□□ 0.42
SND1-210ENST00000483503 NCOA2Q15596 1464 aa17.68■□□□□ 0.42
SND1-210ENST00000483503 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
SND1-210ENST00000483503 RAPGEF6Q8TEU7 1601 aa17.65■□□□□ 0.42
SND1-210ENST00000483503 JPH4Q96JJ6 628 aa17.65■□□□□ 0.42
SND1-210ENST00000483503 ARHGEF11O15085 1522 aa17.64■□□□□ 0.41
SND1-210ENST00000483503 ITGAEP38570 1179 aa17.64■□□□□ 0.41
SND1-210ENST00000483503 CDK11AQ9UQ88 783 aaPredicted RBP17.64■□□□□ 0.41
SND1-210ENST00000483503 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
SND1-210ENST00000483503 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
SND1-210ENST00000483503 CDK13Q14004 1512 aaKnown RBP17.59■□□□□ 0.41
SND1-210ENST00000483503 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
SND1-210ENST00000483503 NUP153P49790 1475 aaKnown RBP17.58■□□□□ 0.41
SND1-210ENST00000483503 RAB3GAP2Q9H2M9 1393 aa17.58■□□□□ 0.4
SND1-210ENST00000483503 MIA2Q96PC5 1412 aa17.57■□□□□ 0.4
SND1-210ENST00000483503 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
SND1-210ENST00000483503 PTPN23Q9H3S7 1636 aa17.55■□□□□ 0.4
SND1-210ENST00000483503 CHD1O14646 1710 aa17.53■□□□□ 0.4
SND1-210ENST00000483503 TROQ12816 1431 aaPredicted RBP17.5■□□□□ 0.39
SND1-210ENST00000483503 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
SND1-210ENST00000483503 ABCA8O94911 1581 aa17.49■□□□□ 0.39
SND1-210ENST00000483503 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
SND1-210ENST00000483503 PLB1Q6P1J6 1458 aa17.49■□□□□ 0.39
SND1-210ENST00000483503 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
SND1-210ENST00000483503 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
SND1-210ENST00000483503 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
SND1-210ENST00000483503 PTPRGP23470 1445 aa17.46■□□□□ 0.39
SND1-210ENST00000483503 ADCY10Q96PN6 1610 aa17.45■□□□□ 0.38
SND1-210ENST00000483503 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
SND1-210ENST00000483503 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
SND1-210ENST00000483503 ARID3CA6NKF2 412 aa17.44■□□□□ 0.38
SND1-210ENST00000483503 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
SND1-210ENST00000483503 PTPRKQ15262 1439 aa17.41■□□□□ 0.38
SND1-210ENST00000483503 PLEKHD1A6NEE1 506 aa17.41■□□□□ 0.38
SND1-210ENST00000483503 NAIPQ13075 1403 aa17.39■□□□□ 0.38
SND1-210ENST00000483503 MAPKBP1O60336 1514 aa17.39■□□□□ 0.37
SND1-210ENST00000483503 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
SND1-210ENST00000483503 ATP10BO94823 1461 aa17.38■□□□□ 0.37
SND1-210ENST00000483503 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
SND1-210ENST00000483503 GCC2Q8IWJ2 1684 aa17.37■□□□□ 0.37
SND1-210ENST00000483503 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
SND1-210ENST00000483503 KIF14Q15058 1648 aa17.36■□□□□ 0.37
SND1-210ENST00000483503 ROCK1Q13464 1354 aa17.36■□□□□ 0.37
SND1-210ENST00000483503 DNMT1P26358 1616 aaKnown RBP17.35■□□□□ 0.37
SND1-210ENST00000483503 DAPK1P53355 1430 aa17.34■□□□□ 0.37
SND1-210ENST00000483503 CFDP1Q9UEE9 299 aaPredicted RBP17.34■□□□□ 0.37
SND1-210ENST00000483503 GPATCH8Q9UKJ3 1502 aaKnown RBP17.33■□□□□ 0.37
SND1-210ENST00000483503 DIEXFQ68CQ4 756 aaKnown RBP17.33■□□□□ 0.36
SND1-210ENST00000483503 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms