RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
CPNE1-225ENST00000483495 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
CPNE1-225ENST00000483495 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.85
CPNE1-225ENST00000483495 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
CPNE1-225ENST00000483495 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-225ENST00000483495 MAP3K1Q13233 1512 aa20.29■□□□□ 0.84
CPNE1-225ENST00000483495 ZEB1P37275 1124 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-225ENST00000483495 KANK4Q5T7N3 995 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-225ENST00000483495 SAMD9Q5K651 1589 aa20.23■□□□□ 0.83
CPNE1-225ENST00000483495 EIF4G3O43432 1585 aaKnown RBP20.22■□□□□ 0.83
CPNE1-225ENST00000483495 FHOD3Q2V2M9 1422 aa20.22■□□□□ 0.83
CPNE1-225ENST00000483495 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
CPNE1-225ENST00000483495 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
CPNE1-225ENST00000483495 P3H3Q8IVL6 736 aa20.18■□□□□ 0.82
CPNE1-225ENST00000483495 FYCO1Q9BQS8 1478 aa20.17■□□□□ 0.82
CPNE1-225ENST00000483495 FMN1Q68DA7 1419 aa20.17■□□□□ 0.82
CPNE1-225ENST00000483495 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
CPNE1-225ENST00000483495 SNAPC4Q5SXM2 1469 aa20.16■□□□□ 0.82
CPNE1-225ENST00000483495 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-225ENST00000483495 IQGAP2Q13576 1575 aa20.13■□□□□ 0.81
CPNE1-225ENST00000483495 CFAP43Q8NDM7 1665 aa20.12■□□□□ 0.81
CPNE1-225ENST00000483495 RRBP1Q9P2E9 1410 aaKnown RBP20.12■□□□□ 0.81
CPNE1-225ENST00000483495 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
CPNE1-225ENST00000483495 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
CPNE1-225ENST00000483495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-225ENST00000483495 KIAA0586Q9BVV6 1533 aa20.07■□□□□ 0.8
CPNE1-225ENST00000483495 UGGT2Q9NYU1 1516 aa20.07■□□□□ 0.8
CPNE1-225ENST00000483495 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
CPNE1-225ENST00000483495 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
CPNE1-225ENST00000483495 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
CPNE1-225ENST00000483495 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
CPNE1-225ENST00000483495 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-225ENST00000483495 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-225ENST00000483495 NUP160Q12769 1436 aa19.96■□□□□ 0.79
CPNE1-225ENST00000483495 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
CPNE1-225ENST00000483495 PHLDB1Q86UU1 1377 aa19.95■□□□□ 0.78
CPNE1-225ENST00000483495 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
CPNE1-225ENST00000483495 KIAA0556O60303 1618 aa19.93■□□□□ 0.78
CPNE1-225ENST00000483495 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
CPNE1-225ENST00000483495 CCDC18Q5T9S5 1454 aa19.91■□□□□ 0.78
CPNE1-225ENST00000483495 HECW1Q76N89 1606 aa19.91■□□□□ 0.78
CPNE1-225ENST00000483495 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
CPNE1-225ENST00000483495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.86■□□□□ 0.77
CPNE1-225ENST00000483495 EHBP1L1Q8N3D4 1523 aa19.85■□□□□ 0.77
CPNE1-225ENST00000483495 FBLN2P98095 1184 aa19.85■□□□□ 0.77
CPNE1-225ENST00000483495 EPRSP07814 1512 aaKnown RBP19.84■□□□□ 0.77
CPNE1-225ENST00000483495 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
CPNE1-225ENST00000483495 MAGI3Q5TCQ9 1506 aa19.8■□□□□ 0.76
CPNE1-225ENST00000483495 NCOA2Q15596 1464 aa19.8■□□□□ 0.76
CPNE1-225ENST00000483495 JPH4Q96JJ6 628 aa19.79■□□□□ 0.76
CPNE1-225ENST00000483495 SUPT6HQ7KZ85 1726 aaKnown RBP19.79■□□□□ 0.76
CPNE1-225ENST00000483495 CARMIL2Q6F5E8 1435 aa19.79■□□□□ 0.76
CPNE1-225ENST00000483495 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
CPNE1-225ENST00000483495 RAPGEF6Q8TEU7 1601 aa19.76■□□□□ 0.75
CPNE1-225ENST00000483495 NUP153P49790 1475 aaKnown RBP19.76■□□□□ 0.75
CPNE1-225ENST00000483495 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
CPNE1-225ENST00000483495 CDK13Q14004 1512 aaKnown RBP19.75■□□□□ 0.75
CPNE1-225ENST00000483495 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
CPNE1-225ENST00000483495 FAM50AQ14320 339 aaKnown RBP19.73■□□□□ 0.75
CPNE1-225ENST00000483495 DHX57Q6P158 1386 aaKnown RBP19.73■□□□□ 0.75
CPNE1-225ENST00000483495 ITGAEP38570 1179 aa19.71■□□□□ 0.75
CPNE1-225ENST00000483495 CHD1O14646 1710 aa19.7■□□□□ 0.74
CPNE1-225ENST00000483495 SETD5Q9C0A6 1442 aa19.68■□□□□ 0.74
CPNE1-225ENST00000483495 RAB3GAP2Q9H2M9 1393 aa19.67■□□□□ 0.74
CPNE1-225ENST00000483495 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
CPNE1-225ENST00000483495 TCOF1Q13428 1488 aaKnown RBP19.65■□□□□ 0.74
CPNE1-225ENST00000483495 ABCA8O94911 1581 aa19.64■□□□□ 0.73
CPNE1-225ENST00000483495 PTPN23Q9H3S7 1636 aa19.63■□□□□ 0.73
CPNE1-225ENST00000483495 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-225ENST00000483495 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
CPNE1-225ENST00000483495 SHROOM2Q13796 1616 aa19.63■□□□□ 0.73
CPNE1-225ENST00000483495 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-225ENST00000483495 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
CPNE1-225ENST00000483495 TROQ12816 1431 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-225ENST00000483495 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
CPNE1-225ENST00000483495 HFM1A2PYH4 1435 aa19.55■□□□□ 0.72
CPNE1-225ENST00000483495 PTPRGP23470 1445 aa19.55■□□□□ 0.72
CPNE1-225ENST00000483495 ADCY10Q96PN6 1610 aa19.54■□□□□ 0.72
CPNE1-225ENST00000483495 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
CPNE1-225ENST00000483495 ATP10BO94823 1461 aa19.53■□□□□ 0.72
CPNE1-225ENST00000483495 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
CPNE1-225ENST00000483495 AKNAQ7Z591 1439 aa19.49■□□□□ 0.71
CPNE1-225ENST00000483495 NAIPQ13075 1403 aa19.49■□□□□ 0.71
CPNE1-225ENST00000483495 UACAQ9BZF9 1416 aa19.46■□□□□ 0.71
CPNE1-225ENST00000483495 KIF14Q15058 1648 aa19.45■□□□□ 0.7
CPNE1-225ENST00000483495 GPATCH8Q9UKJ3 1502 aaKnown RBP19.45■□□□□ 0.7
CPNE1-225ENST00000483495 PLEKHD1A6NEE1 506 aa19.45■□□□□ 0.7
CPNE1-225ENST00000483495 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
CPNE1-225ENST00000483495 ITSN2Q9NZM3 1697 aa19.44■□□□□ 0.7
CPNE1-225ENST00000483495 ABCC10Q5T3U5 1492 aa19.41■□□□□ 0.7
CPNE1-225ENST00000483495 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
CPNE1-225ENST00000483495 DAPK1P53355 1430 aa19.41■□□□□ 0.7
CPNE1-225ENST00000483495 GCC2Q8IWJ2 1684 aa19.41■□□□□ 0.7
CPNE1-225ENST00000483495 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
CPNE1-225ENST00000483495 ABCC2Q92887 1545 aa19.39■□□□□ 0.69
CPNE1-225ENST00000483495 ABCC5O15440 1437 aa19.39■□□□□ 0.69
CPNE1-225ENST00000483495 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-225ENST00000483495 CAMSAP2Q08AD1 1489 aa19.37■□□□□ 0.69
CPNE1-225ENST00000483495 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-225ENST00000483495 ZNF644Q9H582 1327 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms