RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 FAM69CQ0P6D2 419 aa22.77■■□□□ 1.24
TMEM54-206ENST00000482771 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
TMEM54-206ENST00000482771 IGF1RP08069 1367 aa22.63■■□□□ 1.21
TMEM54-206ENST00000482771 ABCC10Q5T3U5 1492 aa22.63■■□□□ 1.21
TMEM54-206ENST00000482771 RUSC2Q8N2Y8 1516 aa22.58■■□□□ 1.21
TMEM54-206ENST00000482771 KIAA0586Q9BVV6 1533 aa22.57■■□□□ 1.2
TMEM54-206ENST00000482771 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
TMEM54-206ENST00000482771 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
TMEM54-206ENST00000482771 MAPKBP1O60336 1514 aa22.53■■□□□ 1.2
TMEM54-206ENST00000482771 ADCY10Q96PN6 1610 aa22.51■■□□□ 1.19
TMEM54-206ENST00000482771 PTPRGP23470 1445 aa22.49■■□□□ 1.19
TMEM54-206ENST00000482771 KDM4FA0A1W2PPD8 638 aa22.47■■□□□ 1.19
TMEM54-206ENST00000482771 DIP2BQ9P265 1576 aa22.46■■□□□ 1.19
TMEM54-206ENST00000482771 CARMIL1Q5VZK9 1371 aa22.46■■□□□ 1.19
TMEM54-206ENST00000482771 TNIKQ9UKE5 1360 aa22.39■■□□□ 1.18
TMEM54-206ENST00000482771 CUL7Q14999 1698 aa22.39■■□□□ 1.17
TMEM54-206ENST00000482771 TSPOAP1O95153 1857 aa22.38■■□□□ 1.17
TMEM54-206ENST00000482771 CARMIL2Q6F5E8 1435 aa22.38■■□□□ 1.17
TMEM54-206ENST00000482771 KDM6BO15054 1643 aa22.38■■□□□ 1.17
TMEM54-206ENST00000482771 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
TMEM54-206ENST00000482771 ASXL2Q76L83 1435 aa22.31■■□□□ 1.16
TMEM54-206ENST00000482771 PLB1Q6P1J6 1458 aa22.28■■□□□ 1.16
TMEM54-206ENST00000482771 UACAQ9BZF9 1416 aa22.26■■□□□ 1.15
TMEM54-206ENST00000482771 UHRF1BP1LA0JNW5 1464 aa22.23■■□□□ 1.15
TMEM54-206ENST00000482771 IQGAP2Q13576 1575 aa22.23■■□□□ 1.15
TMEM54-206ENST00000482771 DISP1Q96F81 1524 aa22.21■■□□□ 1.15
TMEM54-206ENST00000482771 GLI2P10070 1586 aa22.2■■□□□ 1.14
TMEM54-206ENST00000482771 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
TMEM54-206ENST00000482771 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
TMEM54-206ENST00000482771 EPRSP07814 1512 aaKnown RBP22.15■■□□□ 1.14
TMEM54-206ENST00000482771 KDM5BQ9UGL1 1544 aa22.14■■□□□ 1.13
TMEM54-206ENST00000482771 PPRC1Q5VV67 1664 aaKnown RBP22.13■■□□□ 1.13
TMEM54-206ENST00000482771 UGGT2Q9NYU1 1516 aa22.11■■□□□ 1.13
TMEM54-206ENST00000482771 ILDR1Q86SU0 546 aaPredicted RBP22.1■■□□□ 1.13
TMEM54-206ENST00000482771 ADGRL1O94910 1474 aa22.09■■□□□ 1.13
TMEM54-206ENST00000482771 KCNH8Q96L42 1107 aa22.08■■□□□ 1.13
TMEM54-206ENST00000482771 TEX14Q8IWB6 1497 aa22.06■■□□□ 1.12
TMEM54-206ENST00000482771 ZCCHC11Q5TAX3 1644 aaKnown RBP22.02■■□□□ 1.12
TMEM54-206ENST00000482771 MAP3K4Q9Y6R4 1608 aa22.02■■□□□ 1.12
TMEM54-206ENST00000482771 KIAA0556O60303 1618 aa22.02■■□□□ 1.11
TMEM54-206ENST00000482771 WDR7Q9Y4E6 1490 aa21.99■■□□□ 1.11
TMEM54-206ENST00000482771 CD109Q6YHK3 1445 aa21.97■■□□□ 1.11
TMEM54-206ENST00000482771 GOLGA3Q08378 1498 aa21.94■■□□□ 1.1
TMEM54-206ENST00000482771 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
TMEM54-206ENST00000482771 ARID3CA6NKF2 412 aa21.92■■□□□ 1.1
TMEM54-206ENST00000482771 P3H3Q8IVL6 736 aa21.91■■□□□ 1.1
TMEM54-206ENST00000482771 MAGI3Q5TCQ9 1506 aa21.9■■□□□ 1.1
TMEM54-206ENST00000482771 ABCA8O94911 1581 aa21.87■■□□□ 1.09
TMEM54-206ENST00000482771 PRXQ9BXM0 1461 aa21.84■■□□□ 1.09
TMEM54-206ENST00000482771 HECW2Q9P2P5 1572 aa21.84■■□□□ 1.09
TMEM54-206ENST00000482771 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
TMEM54-206ENST00000482771 CFAP43Q8NDM7 1665 aa21.8■■□□□ 1.08
TMEM54-206ENST00000482771 ATP10BO94823 1461 aa21.79■■□□□ 1.08
TMEM54-206ENST00000482771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
TMEM54-206ENST00000482771 HNRNPUL2Q1KMD3 747 aaKnown RBP21.77■■□□□ 1.08
TMEM54-206ENST00000482771 RAPGEF3O95398 923 aa21.75■■□□□ 1.07
TMEM54-206ENST00000482771 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
TMEM54-206ENST00000482771 ARAP3Q8WWN8 1544 aa21.74■■□□□ 1.07
TMEM54-206ENST00000482771 RANGAP1P46060 587 aaPredicted RBP21.71■■□□□ 1.07
TMEM54-206ENST00000482771 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
TMEM54-206ENST00000482771 KIF21BO75037 1637 aa21.67■■□□□ 1.06
TMEM54-206ENST00000482771 ARID4BQ4LE39 1312 aaPredicted RBP21.66■■□□□ 1.06
TMEM54-206ENST00000482771 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
TMEM54-206ENST00000482771 ABCA9Q8IUA7 1624 aa21.61■■□□□ 1.05
TMEM54-206ENST00000482771 PTPRMP28827 1452 aa21.6■■□□□ 1.05
TMEM54-206ENST00000482771 NEO1Q92859 1461 aa21.59■■□□□ 1.05
TMEM54-206ENST00000482771 FBXO41Q8TF61 875 aa21.59■■□□□ 1.05
TMEM54-206ENST00000482771 RAPGEF6Q8TEU7 1601 aa21.56■■□□□ 1.04
TMEM54-206ENST00000482771 SAMD9Q5K651 1589 aa21.55■■□□□ 1.04
TMEM54-206ENST00000482771 NUP153P49790 1475 aaKnown RBP21.54■■□□□ 1.04
TMEM54-206ENST00000482771 ADAMTSL3P82987 1691 aa21.53■■□□□ 1.04
TMEM54-206ENST00000482771 FHOD3Q2V2M9 1422 aa21.53■■□□□ 1.04
TMEM54-206ENST00000482771 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
TMEM54-206ENST00000482771 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
TMEM54-206ENST00000482771 DENND4BO75064 1496 aaPredicted RBP21.48■■□□□ 1.03
TMEM54-206ENST00000482771 FRMPD1Q5SYB0 1578 aa21.45■■□□□ 1.02
TMEM54-206ENST00000482771 BCORL1Q5H9F3 1711 aa21.44■■□□□ 1.02
TMEM54-206ENST00000482771 HSPA2P54652 639 aa21.43■■□□□ 1.02
TMEM54-206ENST00000482771 EEA1Q15075 1411 aa21.43■■□□□ 1.02
TMEM54-206ENST00000482771 FANCAO15360 1455 aa21.43■■□□□ 1.02
TMEM54-206ENST00000482771 MLECQ14165 292 aa21.42■■□□□ 1.02
TMEM54-206ENST00000482771 MADDQ8WXG6 1647 aa21.42■■□□□ 1.02
TMEM54-206ENST00000482771 ATP1B4Q9UN42 357 aaPredicted RBP21.41■■□□□ 1.02
TMEM54-206ENST00000482771 LMTK3Q96Q04 1460 aa21.39■■□□□ 1.02
TMEM54-206ENST00000482771 EHMT2Q96KQ7 1210 aa21.39■■□□□ 1.01
TMEM54-206ENST00000482771 PCF11O94913 1555 aaKnown RBP21.39■■□□□ 1.01
TMEM54-206ENST00000482771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.38■■□□□ 1.01
TMEM54-206ENST00000482771 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
TMEM54-206ENST00000482771 YEATS2Q9ULM3 1422 aa21.36■■□□□ 1.01
TMEM54-206ENST00000482771 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
TMEM54-206ENST00000482771 RICTORQ6R327 1708 aa21.34■■□□□ 1.01
TMEM54-206ENST00000482771 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
TMEM54-206ENST00000482771 SCAPERQ9BY12 1400 aa21.33■■□□□ 1.01
TMEM54-206ENST00000482771 RIMS1Q86UR5 1692 aaKnown RBP21.33■■□□□ 1
TMEM54-206ENST00000482771 EFCAB2Q5VUJ9 269 aa21.32■■□□□ 1
TMEM54-206ENST00000482771 PLCH2O75038 1416 aa21.31■■□□□ 1
TMEM54-206ENST00000482771 MAGI2Q86UL8 1455 aa21.3■■□□□ 1
TMEM54-206ENST00000482771 TTC37Q6PGP7 1564 aa21.3■■□□□ 1
TMEM54-206ENST00000482771 EFCAB5A4FU69 1503 aa21.29■■□□□ 1
TMEM54-206ENST00000482771 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms