RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
CACNA1D-206ENST00000481478 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.35
CACNA1D-206ENST00000481478 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
CACNA1D-206ENST00000481478 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
CACNA1D-206ENST00000481478 TMC1Q8TDI8 760 aa17.22■□□□□ 0.35
CACNA1D-206ENST00000481478 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
CACNA1D-206ENST00000481478 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.34
CACNA1D-206ENST00000481478 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
CACNA1D-206ENST00000481478 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
CACNA1D-206ENST00000481478 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
CACNA1D-206ENST00000481478 TSPY4P0CV99 314 aa17.19■□□□□ 0.34
CACNA1D-206ENST00000481478 TSPY10P0CW01 314 aa17.19■□□□□ 0.34
CACNA1D-206ENST00000481478 ANP32EQ9BTT0 268 aa17.19■□□□□ 0.34
CACNA1D-206ENST00000481478 CCDC136Q96JN2 1154 aa17.18■□□□□ 0.34
CACNA1D-206ENST00000481478 FKBP8Q14318 412 aa17.16■□□□□ 0.34
CACNA1D-206ENST00000481478 A0A0G2JS52 829 aa17.15■□□□□ 0.34
CACNA1D-206ENST00000481478 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
CACNA1D-206ENST00000481478 CUX2O14529 1486 aa17.15■□□□□ 0.34
CACNA1D-206ENST00000481478 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
CACNA1D-206ENST00000481478 MIER1Q8N108 512 aa17.12■□□□□ 0.33
CACNA1D-206ENST00000481478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
CACNA1D-206ENST00000481478 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
CACNA1D-206ENST00000481478 GOLGA6L22H0YM25 854 aa17.11■□□□□ 0.33
CACNA1D-206ENST00000481478 BECN1Q14457 450 aa17.11■□□□□ 0.33
CACNA1D-206ENST00000481478 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
CACNA1D-206ENST00000481478 DDX10Q13206 875 aaKnown RBP17.1■□□□□ 0.33
CACNA1D-206ENST00000481478 PPP1R15AO75807 674 aaPredicted RBP17.09■□□□□ 0.33
CACNA1D-206ENST00000481478 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.32
CACNA1D-206ENST00000481478 CCNB3Q8WWL7 1395 aa17.07■□□□□ 0.32
CACNA1D-206ENST00000481478 DDRGK1Q96HY6 314 aa17.07■□□□□ 0.32
CACNA1D-206ENST00000481478 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
CACNA1D-206ENST00000481478 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
CACNA1D-206ENST00000481478 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
CACNA1D-206ENST00000481478 SALL2Q9Y467 1007 aaPredicted RBP17.03■□□□□ 0.32
CACNA1D-206ENST00000481478 CFAP53Q96M91 514 aa17.03■□□□□ 0.32
CACNA1D-206ENST00000481478 MRS2Q9HD23 443 aa17.02■□□□□ 0.32
CACNA1D-206ENST00000481478 CHMP7Q8WUX9 453 aaPredicted RBP17.01■□□□□ 0.31
CACNA1D-206ENST00000481478 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
CACNA1D-206ENST00000481478 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
CACNA1D-206ENST00000481478 TRIM44Q96DX7 344 aaPredicted RBP17.01■□□□□ 0.31
CACNA1D-206ENST00000481478 ZBTB7CA1YPR0 619 aa17■□□□□ 0.31
CACNA1D-206ENST00000481478 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
CACNA1D-206ENST00000481478 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
CACNA1D-206ENST00000481478 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
CACNA1D-206ENST00000481478 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.3
CACNA1D-206ENST00000481478 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
CACNA1D-206ENST00000481478 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
CACNA1D-206ENST00000481478 CHMP4BQ9H444 224 aaKnown RBP16.94■□□□□ 0.3
CACNA1D-206ENST00000481478 ARXQ96QS3 562 aa16.92■□□□□ 0.3
CACNA1D-206ENST00000481478 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
CACNA1D-206ENST00000481478 GOLGA6L6A8MZA4 724 aa16.91■□□□□ 0.3
CACNA1D-206ENST00000481478 PTMAP06454 111 aaKnown RBP16.9■□□□□ 0.3
CACNA1D-206ENST00000481478 NBR1Q14596 966 aa16.88■□□□□ 0.29
CACNA1D-206ENST00000481478 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
CACNA1D-206ENST00000481478 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
CACNA1D-206ENST00000481478 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
CACNA1D-206ENST00000481478 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
CACNA1D-206ENST00000481478 NRDCO43847 1150 aa16.86■□□□□ 0.29
CACNA1D-206ENST00000481478 HIRIP3Q9BW71 556 aaPredicted RBP16.85■□□□□ 0.29
CACNA1D-206ENST00000481478 NPHP1O15259 732 aa16.85■□□□□ 0.29
CACNA1D-206ENST00000481478 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
CACNA1D-206ENST00000481478 PLEKHD1A6NEE1 506 aa16.84■□□□□ 0.29
CACNA1D-206ENST00000481478 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
CACNA1D-206ENST00000481478 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
CACNA1D-206ENST00000481478 SIN3AQ96ST3 1273 aa16.83■□□□□ 0.29
CACNA1D-206ENST00000481478 MS4A1P11836 297 aa16.83■□□□□ 0.28
CACNA1D-206ENST00000481478 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.28
CACNA1D-206ENST00000481478 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
CACNA1D-206ENST00000481478 FTSJ3Q8IY81 847 aaKnown RBP16.83■□□□□ 0.28
CACNA1D-206ENST00000481478 ARID4BQ4LE39 1312 aaPredicted RBP16.82■□□□□ 0.28
CACNA1D-206ENST00000481478 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
CACNA1D-206ENST00000481478 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
CACNA1D-206ENST00000481478 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
CACNA1D-206ENST00000481478 KIF21BO75037 1637 aa16.79■□□□□ 0.28
CACNA1D-206ENST00000481478 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
CACNA1D-206ENST00000481478 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
CACNA1D-206ENST00000481478 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.28
CACNA1D-206ENST00000481478 PLEKHG5O94827 1062 aa16.77■□□□□ 0.28
CACNA1D-206ENST00000481478 L1TD1Q5T7N2 865 aaKnown RBP16.77■□□□□ 0.27
CACNA1D-206ENST00000481478 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
CACNA1D-206ENST00000481478 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
CACNA1D-206ENST00000481478 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
CACNA1D-206ENST00000481478 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
CACNA1D-206ENST00000481478 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
CACNA1D-206ENST00000481478 FGD1P98174 961 aa16.74■□□□□ 0.27
CACNA1D-206ENST00000481478 SYNJ1O43426 1573 aa16.74■□□□□ 0.27
CACNA1D-206ENST00000481478 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
CACNA1D-206ENST00000481478 CFAP44Q96MT7 982 aa16.72■□□□□ 0.27
CACNA1D-206ENST00000481478 OS9Q13438 667 aaPredicted RBP16.72■□□□□ 0.27
CACNA1D-206ENST00000481478 KCNH8Q96L42 1107 aa16.72■□□□□ 0.27
CACNA1D-206ENST00000481478 HDGFP51858 240 aaKnown RBP16.72■□□□□ 0.27
CACNA1D-206ENST00000481478 FHOD3Q2V2M9 1422 aa16.71■□□□□ 0.27
CACNA1D-206ENST00000481478 POGKQ9P215 609 aa16.71■□□□□ 0.27
CACNA1D-206ENST00000481478 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
CACNA1D-206ENST00000481478 FGD5Q6ZNL6 1462 aa16.68■□□□□ 0.26
CACNA1D-206ENST00000481478 KCNJ4P48050 445 aa16.68■□□□□ 0.26
CACNA1D-206ENST00000481478 IGF1RP08069 1367 aa16.67■□□□□ 0.26
CACNA1D-206ENST00000481478 DHX57Q6P158 1386 aaKnown RBP16.67■□□□□ 0.26
CACNA1D-206ENST00000481478 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
CACNA1D-206ENST00000481478 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms