RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
SMARCE1-210ENST00000481231 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMARCE1-210ENST00000481231 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
SMARCE1-210ENST00000481231 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
SMARCE1-210ENST00000481231 WRNQ14191 1432 aaPredicted RBP eCLIP17.24■□□□□ 0.35
SMARCE1-210ENST00000481231 TSPOAP1O95153 1857 aa17.23■□□□□ 0.35
SMARCE1-210ENST00000481231 ADGRL1O94910 1474 aa17.22■□□□□ 0.35
SMARCE1-210ENST00000481231 HECW2Q9P2P5 1572 aa17.2■□□□□ 0.34
SMARCE1-210ENST00000481231 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
SMARCE1-210ENST00000481231 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
SMARCE1-210ENST00000481231 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
SMARCE1-210ENST00000481231 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
SMARCE1-210ENST00000481231 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
SMARCE1-210ENST00000481231 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
SMARCE1-210ENST00000481231 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.32
SMARCE1-210ENST00000481231 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.32
SMARCE1-210ENST00000481231 ASXL2Q76L83 1435 aa17.01■□□□□ 0.31
SMARCE1-210ENST00000481231 FBXO41Q8TF61 875 aa16.99■□□□□ 0.31
SMARCE1-210ENST00000481231 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
SMARCE1-210ENST00000481231 GLI2P10070 1586 aa16.98■□□□□ 0.31
SMARCE1-210ENST00000481231 PTPRGP23470 1445 aa16.97■□□□□ 0.31
SMARCE1-210ENST00000481231 ABCC2Q92887 1545 aa16.97■□□□□ 0.31
SMARCE1-210ENST00000481231 PLB1Q6P1J6 1458 aa16.95■□□□□ 0.3
SMARCE1-210ENST00000481231 CUL7Q14999 1698 aa16.9■□□□□ 0.3
SMARCE1-210ENST00000481231 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
SMARCE1-210ENST00000481231 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-210ENST00000481231 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
SMARCE1-210ENST00000481231 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
SMARCE1-210ENST00000481231 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
SMARCE1-210ENST00000481231 IGF1RP08069 1367 aa16.83■□□□□ 0.28
SMARCE1-210ENST00000481231 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.28
SMARCE1-210ENST00000481231 UACAQ9BZF9 1416 aa16.82■□□□□ 0.28
SMARCE1-210ENST00000481231 KDM5BQ9UGL1 1544 aa16.79■□□□□ 0.28
SMARCE1-210ENST00000481231 LMTK3Q96Q04 1460 aa16.79■□□□□ 0.28
SMARCE1-210ENST00000481231 ZCCHC11Q5TAX3 1644 aaKnown RBP16.77■□□□□ 0.27
SMARCE1-210ENST00000481231 KIF21BO75037 1637 aa16.76■□□□□ 0.27
SMARCE1-210ENST00000481231 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
SMARCE1-210ENST00000481231 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
SMARCE1-210ENST00000481231 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
SMARCE1-210ENST00000481231 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
SMARCE1-210ENST00000481231 CARMIL1Q5VZK9 1371 aa16.7■□□□□ 0.26
SMARCE1-210ENST00000481231 PTPRMP28827 1452 aa16.69■□□□□ 0.26
SMARCE1-210ENST00000481231 CD109Q6YHK3 1445 aa16.68■□□□□ 0.26
SMARCE1-210ENST00000481231 MAGI3Q5TCQ9 1506 aa16.67■□□□□ 0.26
SMARCE1-210ENST00000481231 ILDR2Q71H61 639 aa16.64■□□□□ 0.25
SMARCE1-210ENST00000481231 PCF11O94913 1555 aaKnown RBP16.64■□□□□ 0.25
SMARCE1-210ENST00000481231 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
SMARCE1-210ENST00000481231 ADAMTSL3P82987 1691 aa16.62■□□□□ 0.25
SMARCE1-210ENST00000481231 CFAP43Q8NDM7 1665 aa16.62■□□□□ 0.25
SMARCE1-210ENST00000481231 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
SMARCE1-210ENST00000481231 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
SMARCE1-210ENST00000481231 SOCS7O14512 581 aa16.58■□□□□ 0.24
SMARCE1-210ENST00000481231 DISP3Q9P2K9 1392 aa16.58■□□□□ 0.24
SMARCE1-210ENST00000481231 ARAP3Q8WWN8 1544 aa16.56■□□□□ 0.24
SMARCE1-210ENST00000481231 MADDQ8WXG6 1647 aa16.56■□□□□ 0.24
SMARCE1-210ENST00000481231 HSPA2P54652 639 aa16.55■□□□□ 0.24
SMARCE1-210ENST00000481231 CERKQ8TCT0 537 aa16.52■□□□□ 0.24
SMARCE1-210ENST00000481231 BCORL1Q5H9F3 1711 aa16.51■□□□□ 0.23
SMARCE1-210ENST00000481231 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-210ENST00000481231 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
SMARCE1-210ENST00000481231 ABCA8O94911 1581 aa16.5■□□□□ 0.23
SMARCE1-210ENST00000481231 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
SMARCE1-210ENST00000481231 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
SMARCE1-210ENST00000481231 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
SMARCE1-210ENST00000481231 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
SMARCE1-210ENST00000481231 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
SMARCE1-210ENST00000481231 SPATA31D1Q6ZQQ2 1576 aa16.4■□□□□ 0.22
SMARCE1-210ENST00000481231 ABCA9Q8IUA7 1624 aa16.4■□□□□ 0.22
SMARCE1-210ENST00000481231 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
SMARCE1-210ENST00000481231 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
SMARCE1-210ENST00000481231 ARHGEF40Q8TER5 1519 aa16.39■□□□□ 0.21
SMARCE1-210ENST00000481231 NEO1Q92859 1461 aa16.37■□□□□ 0.21
SMARCE1-210ENST00000481231 ATP10BO94823 1461 aa16.36■□□□□ 0.21
SMARCE1-210ENST00000481231 CTTNBP2Q8WZ74 1663 aa16.35■□□□□ 0.21
SMARCE1-210ENST00000481231 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
SMARCE1-210ENST00000481231 FANCAO15360 1455 aa16.29■□□□□ 0.2
SMARCE1-210ENST00000481231 MLECQ14165 292 aa16.28■□□□□ 0.2
SMARCE1-210ENST00000481231 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
SMARCE1-210ENST00000481231 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
SMARCE1-210ENST00000481231 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
SMARCE1-210ENST00000481231 YEATS2Q9ULM3 1422 aa16.28■□□□□ 0.2
SMARCE1-210ENST00000481231 RICTORQ6R327 1708 aa16.27■□□□□ 0.19
SMARCE1-210ENST00000481231 AKNAQ7Z591 1439 aa16.27■□□□□ 0.19
SMARCE1-210ENST00000481231 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
SMARCE1-210ENST00000481231 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
SMARCE1-210ENST00000481231 ZFYVE16Q7Z3T8 1539 aa16.24■□□□□ 0.19
SMARCE1-210ENST00000481231 FER1L4A9Z1Z3 1794 aa16.23■□□□□ 0.19
SMARCE1-210ENST00000481231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
SMARCE1-210ENST00000481231 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
SMARCE1-210ENST00000481231 ZMYM4Q5VZL5 1548 aa16.22■□□□□ 0.19
SMARCE1-210ENST00000481231 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.18
SMARCE1-210ENST00000481231 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
SMARCE1-210ENST00000481231 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
SMARCE1-210ENST00000481231 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
SMARCE1-210ENST00000481231 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
SMARCE1-210ENST00000481231 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
SMARCE1-210ENST00000481231 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
SMARCE1-210ENST00000481231 ARHGEF12Q9NZN5 1544 aa16.17■□□□□ 0.18
SMARCE1-210ENST00000481231 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
SMARCE1-210ENST00000481231 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms