RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 ADAMTS12P58397 1594 aa43.16■■■■■ 4.5
TNFRSF25-213ENST00000480393 APLP2Q06481 763 aa43.14■■■■■ 4.5
TNFRSF25-213ENST00000480393 EIF4G3O43432 1585 aaKnown RBP43.13■■■■■ 4.5
TNFRSF25-213ENST00000480393 TTBK1Q5TCY1 1321 aaPredicted RBP43.1■■■■■ 4.49
TNFRSF25-213ENST00000480393 EFCAB5A4FU69 1503 aa43.02■■■■■ 4.48
TNFRSF25-213ENST00000480393 SNAPC4Q5SXM2 1469 aa42.96■■■■■ 4.47
TNFRSF25-213ENST00000480393 MAGI1Q96QZ7 1491 aaPredicted RBP42.85■■■■■ 4.45
TNFRSF25-213ENST00000480393 P3H3Q8IVL6 736 aa42.83■■■■■ 4.45
TNFRSF25-213ENST00000480393 FHOD3Q2V2M9 1422 aa42.81■■■■■ 4.44
TNFRSF25-213ENST00000480393 SAMD9Q5K651 1589 aa42.78■■■■■ 4.44
TNFRSF25-213ENST00000480393 IQGAP2Q13576 1575 aa42.75■■■■■ 4.43
TNFRSF25-213ENST00000480393 HRCP23327 699 aa42.74■■■■■ 4.43
TNFRSF25-213ENST00000480393 GRIN2AQ12879 1464 aa42.73■■■■■ 4.43
TNFRSF25-213ENST00000480393 PCF11O94913 1555 aaKnown RBP42.69■■■■■ 4.42
TNFRSF25-213ENST00000480393 SYNJ2O15056 1496 aa42.69■■■■■ 4.42
TNFRSF25-213ENST00000480393 FMN1Q68DA7 1419 aa42.64■■■■■ 4.42
TNFRSF25-213ENST00000480393 MAP3K1Q13233 1512 aa42.62■■■■■ 4.41
TNFRSF25-213ENST00000480393 FYCO1Q9BQS8 1478 aa42.6■■■■■ 4.41
TNFRSF25-213ENST00000480393 TIAM1Q13009 1591 aa42.6■■■■■ 4.41
TNFRSF25-213ENST00000480393 CHMP7Q8WUX9 453 aaPredicted RBP42.6■■■■■ 4.41
TNFRSF25-213ENST00000480393 KANK4Q5T7N3 995 aaPredicted RBP42.58■■■■■ 4.41
TNFRSF25-213ENST00000480393 KIAA0586Q9BVV6 1533 aa42.57■■■■■ 4.41
TNFRSF25-213ENST00000480393 CASKIN1Q8WXD9 1431 aa42.57■■■■■ 4.41
TNFRSF25-213ENST00000480393 UGGT2Q9NYU1 1516 aa42.51■■■■■ 4.4
TNFRSF25-213ENST00000480393 CFAP43Q8NDM7 1665 aa42.51■■■■■ 4.4
TNFRSF25-213ENST00000480393 FBLN2P98095 1184 aa42.49■■■■■ 4.39
TNFRSF25-213ENST00000480393 ATP1B4Q9UN42 357 aaPredicted RBP42.48■■■■■ 4.39
TNFRSF25-213ENST00000480393 CEP170Q5SW79 1584 aa42.45■■■■■ 4.39
TNFRSF25-213ENST00000480393 LRRC9Q6ZRR7 1453 aa42.38■■■■■ 4.37
TNFRSF25-213ENST00000480393 NUP160Q12769 1436 aa42.36■■■■■ 4.37
TNFRSF25-213ENST00000480393 KIAA0556O60303 1618 aa42.31■■■■■ 4.36
TNFRSF25-213ENST00000480393 DISP1Q96F81 1524 aa42.26■■■■■ 4.36
TNFRSF25-213ENST00000480393 RRBP1Q9P2E9 1410 aaKnown RBP42.2■■■■■ 4.35
TNFRSF25-213ENST00000480393 HECW1Q76N89 1606 aa42.2■■■■■ 4.35
TNFRSF25-213ENST00000480393 LRRIQ1Q96JM4 1722 aa42.16■■■■■ 4.34
TNFRSF25-213ENST00000480393 HNRNPUL2Q1KMD3 747 aaKnown RBP42.15■■■■■ 4.34
TNFRSF25-213ENST00000480393 CHD1O14646 1710 aa42.14■■■■■ 4.34
TNFRSF25-213ENST00000480393 CCDC18Q5T9S5 1454 aa42.13■■■■■ 4.33
TNFRSF25-213ENST00000480393 ZEB1P37275 1124 aaPredicted RBP42.12■■■■■ 4.33
TNFRSF25-213ENST00000480393 CCNB3Q8WWL7 1395 aa42.08■■■■■ 4.33
TNFRSF25-213ENST00000480393 CARMIL2Q6F5E8 1435 aa42.08■■■■■ 4.33
TNFRSF25-213ENST00000480393 JPH4Q96JJ6 628 aa42.06■■■■■ 4.32
TNFRSF25-213ENST00000480393 MTUS2Q5JR59 1369 aa42.05■■■■■ 4.32
TNFRSF25-213ENST00000480393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.03■■■■■ 4.32
TNFRSF25-213ENST00000480393 PHLDB1Q86UU1 1377 aa42.01■■■■■ 4.32
TNFRSF25-213ENST00000480393 EHBP1L1Q8N3D4 1523 aa41.98■■■■■ 4.31
TNFRSF25-213ENST00000480393 CCER1Q8TC90 406 aaPredicted RBP41.98■■■■■ 4.31
TNFRSF25-213ENST00000480393 EPRSP07814 1512 aaKnown RBP41.98■■■■■ 4.31
TNFRSF25-213ENST00000480393 RAPGEF6Q8TEU7 1601 aa41.95■■■■■ 4.31
TNFRSF25-213ENST00000480393 CDK13Q14004 1512 aaKnown RBP41.88■■■■■ 4.29
TNFRSF25-213ENST00000480393 SUPT6HQ7KZ85 1726 aaKnown RBP41.88■■■■■ 4.29
TNFRSF25-213ENST00000480393 NUP153P49790 1475 aaKnown RBP41.82■■■■■ 4.29
TNFRSF25-213ENST00000480393 MAGI3Q5TCQ9 1506 aa41.82■■■■■ 4.28
TNFRSF25-213ENST00000480393 PRG4Q92954 1404 aaPredicted RBP41.81■■■■■ 4.28
TNFRSF25-213ENST00000480393 NCOA2Q15596 1464 aa41.8■■■■■ 4.28
TNFRSF25-213ENST00000480393 ARID3CA6NKF2 412 aa41.77■■■■■ 4.28
TNFRSF25-213ENST00000480393 PLB1Q6P1J6 1458 aa41.75■■■■■ 4.27
TNFRSF25-213ENST00000480393 SHROOM2Q13796 1616 aa41.74■■■■■ 4.27
TNFRSF25-213ENST00000480393 FAM50AQ14320 339 aaKnown RBP41.73■■■■■ 4.27
TNFRSF25-213ENST00000480393 FGD6Q6ZV73 1430 aa41.72■■■■■ 4.27
TNFRSF25-213ENST00000480393 ITGAEP38570 1179 aa41.7■■■■■ 4.27
TNFRSF25-213ENST00000480393 MYOM3Q5VTT5 1437 aa41.68■■■■■ 4.26
TNFRSF25-213ENST00000480393 ARHGEF11O15085 1522 aa41.68■■■■■ 4.26
TNFRSF25-213ENST00000480393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.66■■■■■ 4.26
TNFRSF25-213ENST00000480393 ABCA8O94911 1581 aa41.64■■■■■ 4.26
TNFRSF25-213ENST00000480393 CLASP1Q7Z460 1538 aa41.62■■■■■ 4.25
TNFRSF25-213ENST00000480393 CDK11AQ9UQ88 783 aaPredicted RBP41.61■■■■■ 4.25
TNFRSF25-213ENST00000480393 PTPRGP23470 1445 aa41.59■■■■■ 4.25
TNFRSF25-213ENST00000480393 PTPN23Q9H3S7 1636 aa41.48■■■■■ 4.23
TNFRSF25-213ENST00000480393 TROQ12816 1431 aaPredicted RBP41.46■■■■■ 4.23
TNFRSF25-213ENST00000480393 ERCC6L2Q5T890 1561 aa41.44■■■■■ 4.22
TNFRSF25-213ENST00000480393 MIA2Q96PC5 1412 aa41.39■■■■■ 4.22
TNFRSF25-213ENST00000480393 TCOF1Q13428 1488 aaKnown RBP41.38■■■■■ 4.22
TNFRSF25-213ENST00000480393 ATP10BO94823 1461 aa41.37■■■■■ 4.21
TNFRSF25-213ENST00000480393 SETD5Q9C0A6 1442 aa41.37■■■■■ 4.21
TNFRSF25-213ENST00000480393 UACAQ9BZF9 1416 aa41.35■■■■■ 4.21
TNFRSF25-213ENST00000480393 ADCY10Q96PN6 1610 aa41.35■■■■■ 4.21
TNFRSF25-213ENST00000480393 RAB3GAP2Q9H2M9 1393 aa41.33■■■■■ 4.21
TNFRSF25-213ENST00000480393 DHX57Q6P158 1386 aaKnown RBP41.29■■■■■ 4.2
TNFRSF25-213ENST00000480393 PLEKHD1A6NEE1 506 aa41.27■■■■■ 4.2
TNFRSF25-213ENST00000480393 KIF14Q15058 1648 aa41.26■■■■■ 4.2
TNFRSF25-213ENST00000480393 ABCC2Q92887 1545 aa41.23■■■■■ 4.19
TNFRSF25-213ENST00000480393 ITSN2Q9NZM3 1697 aa41.22■■■■■ 4.19
TNFRSF25-213ENST00000480393 CLSPNQ9HAW4 1339 aa41.19■■■■■ 4.19
TNFRSF25-213ENST00000480393 PTPRKQ15262 1439 aa41.19■■■■■ 4.19
TNFRSF25-213ENST00000480393 HFM1A2PYH4 1435 aa41.11■■■■■ 4.17
TNFRSF25-213ENST00000480393 GPATCH8Q9UKJ3 1502 aaKnown RBP41.1■■■■■ 4.17
TNFRSF25-213ENST00000480393 UHRF1BP1LA0JNW5 1464 aa41.07■■■■■ 4.17
TNFRSF25-213ENST00000480393 OSCARQ8IYS5 282 aa41.07■■■■■ 4.16
TNFRSF25-213ENST00000480393 CFDP1Q9UEE9 299 aaPredicted RBP41.05■■■■■ 4.16
TNFRSF25-213ENST00000480393 ABCC10Q5T3U5 1492 aa41.05■■■■■ 4.16
TNFRSF25-213ENST00000480393 CAMSAP2Q08AD1 1489 aa41.01■■■■■ 4.16
TNFRSF25-213ENST00000480393 DNMT1P26358 1616 aaKnown RBP41.01■■■■■ 4.16
TNFRSF25-213ENST00000480393 DAPK1P53355 1430 aa40.98■■■■■ 4.15
TNFRSF25-213ENST00000480393 NAIPQ13075 1403 aa40.98■■■■■ 4.15
TNFRSF25-213ENST00000480393 CDC42BPAQ5VT25 1732 aa40.98■■■■■ 4.15
TNFRSF25-213ENST00000480393 AKNAQ7Z591 1439 aa40.97■■■■■ 4.15
TNFRSF25-213ENST00000480393 ZNF644Q9H582 1327 aaPredicted RBP40.96■■■■■ 4.15
TNFRSF25-213ENST00000480393 CHIC2Q9UKJ5 165 aa40.95■■■■■ 4.15
TNFRSF25-213ENST00000480393 ZCCHC11Q5TAX3 1644 aaKnown RBP40.94■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms