RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 TSPY10P0CW01 314 aa18.1■□□□□ 0.49
MCF2L-225ENST00000480321 RSF1Q96T23 1441 aaPredicted RBP18.08■□□□□ 0.49
MCF2L-225ENST00000480321 CEP162Q5TB80 1403 aa18.06■□□□□ 0.48
MCF2L-225ENST00000480321 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
MCF2L-225ENST00000480321 ARXQ96QS3 562 aa18.05■□□□□ 0.48
MCF2L-225ENST00000480321 BECN1Q14457 450 aa18.04■□□□□ 0.48
MCF2L-225ENST00000480321 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-225ENST00000480321 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
MCF2L-225ENST00000480321 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
MCF2L-225ENST00000480321 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
MCF2L-225ENST00000480321 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
MCF2L-225ENST00000480321 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
MCF2L-225ENST00000480321 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
MCF2L-225ENST00000480321 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-225ENST00000480321 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-225ENST00000480321 PPP1R15AO75807 674 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-225ENST00000480321 CDK11BP21127 795 aaKnown RBP17.91■□□□□ 0.46
MCF2L-225ENST00000480321 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
MCF2L-225ENST00000480321 GOLGA6L22H0YM25 854 aa17.9■□□□□ 0.46
MCF2L-225ENST00000480321 C14orf37Q86TY3 774 aa17.9■□□□□ 0.46
MCF2L-225ENST00000480321 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
MCF2L-225ENST00000480321 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
MCF2L-225ENST00000480321 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-225ENST00000480321 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
MCF2L-225ENST00000480321 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
MCF2L-225ENST00000480321 TRIM44Q96DX7 344 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-225ENST00000480321 NCLP19338 710 aaKnown RBP17.85■□□□□ 0.45
MCF2L-225ENST00000480321 RRP7BPQ9NSQ0 103 aa17.85■□□□□ 0.45
MCF2L-225ENST00000480321 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.45
MCF2L-225ENST00000480321 KIF27Q86VH2 1401 aa17.83■□□□□ 0.45
MCF2L-225ENST00000480321 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
MCF2L-225ENST00000480321 HIRIP3Q9BW71 556 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-225ENST00000480321 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
MCF2L-225ENST00000480321 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
MCF2L-225ENST00000480321 NACADO15069 1562 aa17.78■□□□□ 0.44
MCF2L-225ENST00000480321 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
MCF2L-225ENST00000480321 ARID4BQ4LE39 1312 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-225ENST00000480321 RGL3Q3MIN7 710 aa17.76■□□□□ 0.43
MCF2L-225ENST00000480321 KNSTRNQ9Y448 316 aa17.75■□□□□ 0.43
MCF2L-225ENST00000480321 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-225ENST00000480321 CASC1Q6TDU7 716 aa17.75■□□□□ 0.43
MCF2L-225ENST00000480321 CHMP4BQ9H444 224 aaKnown RBP17.73■□□□□ 0.43
MCF2L-225ENST00000480321 CCER2I3L3R5 266 aa17.73■□□□□ 0.43
MCF2L-225ENST00000480321 NOP58Q9Y2X3 529 aaKnown RBP17.72■□□□□ 0.43
MCF2L-225ENST00000480321 TULP1O00294 542 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-225ENST00000480321 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
MCF2L-225ENST00000480321 MS4A1P11836 297 aa17.71■□□□□ 0.43
MCF2L-225ENST00000480321 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
MCF2L-225ENST00000480321 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
MCF2L-225ENST00000480321 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-225ENST00000480321 CCNB3Q8WWL7 1395 aa17.68■□□□□ 0.42
MCF2L-225ENST00000480321 CFDP1Q9UEE9 299 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-225ENST00000480321 FTSJ3Q8IY81 847 aaKnown RBP17.66■□□□□ 0.42
MCF2L-225ENST00000480321 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-225ENST00000480321 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
MCF2L-225ENST00000480321 PTMAP06454 111 aaKnown RBP17.62■□□□□ 0.41
MCF2L-225ENST00000480321 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
MCF2L-225ENST00000480321 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
MCF2L-225ENST00000480321 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
MCF2L-225ENST00000480321 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
MCF2L-225ENST00000480321 NAP1L5Q96NT1 182 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-225ENST00000480321 LMOD2Q6P5Q4 547 aa17.57■□□□□ 0.4
MCF2L-225ENST00000480321 SENP3-EIF4A1A0A087X0R7 540 aa17.56■□□□□ 0.4
MCF2L-225ENST00000480321 CFAP44Q96MT7 982 aa17.56■□□□□ 0.4
MCF2L-225ENST00000480321 POGKQ9P215 609 aa17.56■□□□□ 0.4
MCF2L-225ENST00000480321 SIN3AQ96ST3 1273 aa17.56■□□□□ 0.4
MCF2L-225ENST00000480321 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
MCF2L-225ENST00000480321 LAS1LQ9Y4W2 734 aaKnown RBP17.55■□□□□ 0.4
MCF2L-225ENST00000480321 L1TD1Q5T7N2 865 aaKnown RBP17.55■□□□□ 0.4
MCF2L-225ENST00000480321 DNTTIP2Q5QJE6 756 aaKnown RBP17.54■□□□□ 0.4
MCF2L-225ENST00000480321 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
MCF2L-225ENST00000480321 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
MCF2L-225ENST00000480321 TMF1P82094 1093 aa17.52■□□□□ 0.4
MCF2L-225ENST00000480321 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
MCF2L-225ENST00000480321 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
MCF2L-225ENST00000480321 NPHP1O15259 732 aa17.5■□□□□ 0.39
MCF2L-225ENST00000480321 RGS3P49796 1198 aa17.49■□□□□ 0.39
MCF2L-225ENST00000480321 GOLGA6L6A8MZA4 724 aa17.49■□□□□ 0.39
MCF2L-225ENST00000480321 ARHGAP35Q9NRY4 1499 aa17.48■□□□□ 0.39
MCF2L-225ENST00000480321 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
MCF2L-225ENST00000480321 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
MCF2L-225ENST00000480321 PTMSP20962 102 aa17.47■□□□□ 0.39
MCF2L-225ENST00000480321 HSCBQ8IWL3 235 aa17.47■□□□□ 0.39
MCF2L-225ENST00000480321 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.38
MCF2L-225ENST00000480321 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-225ENST00000480321 TAOK2Q9UL54 1235 aa17.44■□□□□ 0.38
MCF2L-225ENST00000480321 TPRNQ4KMQ1 711 aa17.44■□□□□ 0.38
MCF2L-225ENST00000480321 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
MCF2L-225ENST00000480321 NRDCO43847 1150 aa17.44■□□□□ 0.38
MCF2L-225ENST00000480321 KANK1Q14678 1352 aa17.42■□□□□ 0.38
MCF2L-225ENST00000480321 U2SURPO15042 1029 aaKnown RBP17.41■□□□□ 0.38
MCF2L-225ENST00000480321 CC2D1BQ5T0F9 858 aaKnown RBP17.41■□□□□ 0.38
MCF2L-225ENST00000480321 DEKP35659 375 aaKnown RBP17.41■□□□□ 0.38
MCF2L-225ENST00000480321 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
MCF2L-225ENST00000480321 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
MCF2L-225ENST00000480321 OS9Q13438 667 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-225ENST00000480321 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
MCF2L-225ENST00000480321 RALBP1Q15311 655 aa17.39■□□□□ 0.37
MCF2L-225ENST00000480321 SOGA1O94964 1423 aa17.39■□□□□ 0.37
MCF2L-225ENST00000480321 MCCP23508 829 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms