RNA–Protein interactions for RNA: ENST00000480191.1

GTF3C6-202, Transcript of general transcription factor IIIC subunit 6, humanhuman

TSL 3

Gene GTF3C6, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-202ENST00000480191 CLCN6P51797 869 aa10.32□□□□□ -0.76
GTF3C6-202ENST00000480191 PCDH10Q9P2E7 1040 aa10.32□□□□□ -0.76
GTF3C6-202ENST00000480191 UNC13AQ9UPW8 1703 aa10.31□□□□□ -0.76
GTF3C6-202ENST00000480191 POTEB2H3BUK9 544 aa10.31□□□□□ -0.76
GTF3C6-202ENST00000480191 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
GTF3C6-202ENST00000480191 SUPT5HO00267 1087 aaKnown RBP10.26□□□□□ -0.77
GTF3C6-202ENST00000480191 SSUH2Q9Y2M2 353 aa10.25□□□□□ -0.77
GTF3C6-202ENST00000480191 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
GTF3C6-202ENST00000480191 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.77
GTF3C6-202ENST00000480191 PKD2Q13563 968 aa10.19□□□□□ -0.78
GTF3C6-202ENST00000480191 FARP1Q9Y4F1 1045 aaPredicted RBP10.19□□□□□ -0.78
GTF3C6-202ENST00000480191 BAZ1AQ9NRL2 1556 aaPredicted RBP10.18□□□□□ -0.78
GTF3C6-202ENST00000480191 HAP1P54257 671 aaPredicted RBP10.16□□□□□ -0.78
GTF3C6-202ENST00000480191 BICRAQ9NZM4 1560 aa10.16□□□□□ -0.78
GTF3C6-202ENST00000480191 RSF1Q96T23 1441 aaPredicted RBP10.16□□□□□ -0.78
GTF3C6-202ENST00000480191 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
GTF3C6-202ENST00000480191 LCE2DQ5TA82 110 aaPredicted RBP10.13□□□□□ -0.79
GTF3C6-202ENST00000480191 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
GTF3C6-202ENST00000480191 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
GTF3C6-202ENST00000480191 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
GTF3C6-202ENST00000480191 SMARCA4P51532 1647 aa10.08□□□□□ -0.8
GTF3C6-202ENST00000480191 STAG3Q9UJ98 1225 aa10.08□□□□□ -0.8
GTF3C6-202ENST00000480191 MROH2BQ7Z745 1585 aa10.08□□□□□ -0.8
GTF3C6-202ENST00000480191 ZRANB1Q9UGI0 708 aa10.07□□□□□ -0.8
GTF3C6-202ENST00000480191 VSIG10Q8N0Z9 540 aa10.06□□□□□ -0.8
GTF3C6-202ENST00000480191 KLHL34Q8N239 644 aa10.06□□□□□ -0.8
GTF3C6-202ENST00000480191 PABPN1Q86U42 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
GTF3C6-202ENST00000480191 BCANQ96GW7 911 aa10.04□□□□□ -0.8
GTF3C6-202ENST00000480191 POTEJP0CG39 1038 aa10.02□□□□□ -0.81
GTF3C6-202ENST00000480191 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
GTF3C6-202ENST00000480191 ECM2O94769 699 aaPredicted RBP10.01□□□□□ -0.81
GTF3C6-202ENST00000480191 BBXQ8WY36 941 aaPredicted RBP10.01□□□□□ -0.81
GTF3C6-202ENST00000480191 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.01□□□□□ -0.81
GTF3C6-202ENST00000480191 WIZO95785 1651 aa10.01□□□□□ -0.81
GTF3C6-202ENST00000480191 FAM163AQ96GL9 167 aaPredicted RBP10□□□□□ -0.81
GTF3C6-202ENST00000480191 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
GTF3C6-202ENST00000480191 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
GTF3C6-202ENST00000480191 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
GTF3C6-202ENST00000480191 SMARCA2P51531 1590 aa9.96□□□□□ -0.82
GTF3C6-202ENST00000480191 NPM1P06748 294 aaKnown RBP eCLIP9.92□□□□□ -0.82
GTF3C6-202ENST00000480191 METRNQ9UJH8 293 aa9.92□□□□□ -0.82
GTF3C6-202ENST00000480191 MIER1Q8N108 512 aa9.91□□□□□ -0.82
GTF3C6-202ENST00000480191 MAMSTRQ6ZN01 415 aa9.9□□□□□ -0.82
GTF3C6-202ENST00000480191 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.82
GTF3C6-202ENST00000480191 RGL2O15211 777 aa9.89□□□□□ -0.83
GTF3C6-202ENST00000480191 EIF4G1Q04637 1599 aaKnown RBP9.88□□□□□ -0.83
GTF3C6-202ENST00000480191 CDAN1Q8IWY9 1227 aa9.88□□□□□ -0.83
GTF3C6-202ENST00000480191 PHF12Q96QT6 1004 aa9.88□□□□□ -0.83
GTF3C6-202ENST00000480191 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
GTF3C6-202ENST00000480191 ATAD2BQ9ULI0 1458 aa9.87□□□□□ -0.83
GTF3C6-202ENST00000480191 CFAP44Q96MT7 982 aa9.86□□□□□ -0.83
GTF3C6-202ENST00000480191 TAOK2Q9UL54 1235 aa9.86□□□□□ -0.83
GTF3C6-202ENST00000480191 KDM2AQ9Y2K7 1162 aa9.86□□□□□ -0.83
GTF3C6-202ENST00000480191 BAZ1BQ9UIG0 1483 aaKnown RBP9.85□□□□□ -0.83
GTF3C6-202ENST00000480191 PLEKHG5O94827 1062 aa9.85□□□□□ -0.83
GTF3C6-202ENST00000480191 HMGXB3Q12766 1538 aa9.85□□□□□ -0.83
GTF3C6-202ENST00000480191 C7P10643 843 aa9.83□□□□□ -0.84
GTF3C6-202ENST00000480191 ASTLQ6HA08 431 aaPredicted RBP9.83□□□□□ -0.84
GTF3C6-202ENST00000480191 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
GTF3C6-202ENST00000480191 SLC39A7Q92504 469 aa9.82□□□□□ -0.84
GTF3C6-202ENST00000480191 CCDC88BA6NC98 1476 aa9.81□□□□□ -0.84
GTF3C6-202ENST00000480191 NCAPD3P42695 1498 aa9.81□□□□□ -0.84
GTF3C6-202ENST00000480191 TRIM41Q8WV44 630 aa9.81□□□□□ -0.84
GTF3C6-202ENST00000480191 SCUBE2Q9NQ36 999 aa9.81□□□□□ -0.84
GTF3C6-202ENST00000480191 CREBZFQ9NS37 354 aa9.8□□□□□ -0.84
GTF3C6-202ENST00000480191 CIZ1Q9ULV3 898 aaPredicted RBP9.8□□□□□ -0.84
GTF3C6-202ENST00000480191 ATMINO43313 823 aaPredicted RBP9.79□□□□□ -0.84
GTF3C6-202ENST00000480191 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
GTF3C6-202ENST00000480191 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
GTF3C6-202ENST00000480191 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
GTF3C6-202ENST00000480191 MMRN1Q13201 1228 aa9.74□□□□□ -0.85
GTF3C6-202ENST00000480191 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
GTF3C6-202ENST00000480191 MS4A3Q96HJ5 214 aa9.72□□□□□ -0.85
GTF3C6-202ENST00000480191 CC2D2AQ9P2K1 1620 aa9.71□□□□□ -0.85
GTF3C6-202ENST00000480191 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.86
GTF3C6-202ENST00000480191 DNAJC5Q9H3Z4 198 aa9.7□□□□□ -0.86
GTF3C6-202ENST00000480191 GSE1Q14687 1217 aa9.69□□□□□ -0.86
GTF3C6-202ENST00000480191 TPRNQ4KMQ1 711 aa9.69□□□□□ -0.86
GTF3C6-202ENST00000480191 POTEFA5A3E0 1075 aa9.67□□□□□ -0.86
GTF3C6-202ENST00000480191 SPNS2Q8IVW8 549 aa9.67□□□□□ -0.86
GTF3C6-202ENST00000480191 PRDM2Q13029 1718 aa9.66□□□□□ -0.86
GTF3C6-202ENST00000480191 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
GTF3C6-202ENST00000480191 RNF25Q96BH1 459 aaPredicted RBP9.63□□□□□ -0.87
GTF3C6-202ENST00000480191 NUBP1P53384 320 aa9.62□□□□□ -0.87
GTF3C6-202ENST00000480191 CFTRP13569 1480 aa9.6□□□□□ -0.87
GTF3C6-202ENST00000480191 WRNQ14191 1432 aaPredicted RBP eCLIP9.6□□□□□ -0.87
GTF3C6-202ENST00000480191 ABCC8Q09428 1581 aa9.59□□□□□ -0.87
GTF3C6-202ENST00000480191 ST18O60284 1047 aa9.59□□□□□ -0.87
GTF3C6-202ENST00000480191 EEA1Q15075 1411 aa9.58□□□□□ -0.88
GTF3C6-202ENST00000480191 RIOK3O14730 519 aaKnown RBP9.58□□□□□ -0.88
GTF3C6-202ENST00000480191 NBR1Q14596 966 aa9.58□□□□□ -0.88
GTF3C6-202ENST00000480191 DCAF8Q5TAQ9 597 aa9.56□□□□□ -0.88
GTF3C6-202ENST00000480191 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
GTF3C6-202ENST00000480191 TOP2BQ02880 1626 aa9.54□□□□□ -0.88
GTF3C6-202ENST00000480191 BIVM-ERCC5R4GMW8 1640 aa9.54□□□□□ -0.88
GTF3C6-202ENST00000480191 MNX1P50219 401 aaPredicted RBP9.54□□□□□ -0.88
GTF3C6-202ENST00000480191 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
GTF3C6-202ENST00000480191 FAM212AQ96EL1 285 aa9.54□□□□□ -0.88
GTF3C6-202ENST00000480191 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
GTF3C6-202ENST00000480191 LAMC3Q9Y6N6 1575 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms