RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
COL17A1-205ENST00000480127 FAM69CQ0P6D2 419 aa12.61□□□□□ -0.39
COL17A1-205ENST00000480127 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
COL17A1-205ENST00000480127 MAPKBP1O60336 1514 aa12.58□□□□□ -0.4
COL17A1-205ENST00000480127 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL17A1-205ENST00000480127 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
COL17A1-205ENST00000480127 ADCY10Q96PN6 1610 aa12.56□□□□□ -0.4
COL17A1-205ENST00000480127 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.4
COL17A1-205ENST00000480127 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.41
COL17A1-205ENST00000480127 IGF1RP08069 1367 aa12.51□□□□□ -0.41
COL17A1-205ENST00000480127 KDM6BO15054 1643 aa12.5□□□□□ -0.41
COL17A1-205ENST00000480127 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
COL17A1-205ENST00000480127 PTPRGP23470 1445 aa12.45□□□□□ -0.42
COL17A1-205ENST00000480127 CUL7Q14999 1698 aa12.45□□□□□ -0.42
COL17A1-205ENST00000480127 TSPOAP1O95153 1857 aa12.44□□□□□ -0.42
COL17A1-205ENST00000480127 ABCC2Q92887 1545 aa12.41□□□□□ -0.42
COL17A1-205ENST00000480127 TNIKQ9UKE5 1360 aa12.41□□□□□ -0.42
COL17A1-205ENST00000480127 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
COL17A1-205ENST00000480127 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
COL17A1-205ENST00000480127 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
COL17A1-205ENST00000480127 GLI2P10070 1586 aa12.39□□□□□ -0.43
COL17A1-205ENST00000480127 PPRC1Q5VV67 1664 aaKnown RBP12.38□□□□□ -0.43
COL17A1-205ENST00000480127 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
COL17A1-205ENST00000480127 PLB1Q6P1J6 1458 aa12.38□□□□□ -0.43
COL17A1-205ENST00000480127 UHRF1BP1LA0JNW5 1464 aa12.37□□□□□ -0.43
COL17A1-205ENST00000480127 ILDR1Q86SU0 546 aaPredicted RBP12.36□□□□□ -0.43
COL17A1-205ENST00000480127 COL17A1Q9UMD9 1497 aaPredicted RBP12.35□□□□□ -0.43
COL17A1-205ENST00000480127 UACAQ9BZF9 1416 aa12.35□□□□□ -0.43
COL17A1-205ENST00000480127 IQGAP2Q13576 1575 aa12.35□□□□□ -0.43
COL17A1-205ENST00000480127 DISP1Q96F81 1524 aa12.34□□□□□ -0.43
COL17A1-205ENST00000480127 ADGRL1O94910 1474 aa12.34□□□□□ -0.43
COL17A1-205ENST00000480127 EPRSP07814 1512 aaKnown RBP12.32□□□□□ -0.44
COL17A1-205ENST00000480127 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
COL17A1-205ENST00000480127 MAP3K4Q9Y6R4 1608 aa12.3□□□□□ -0.44
COL17A1-205ENST00000480127 UGGT2Q9NYU1 1516 aa12.28□□□□□ -0.44
COL17A1-205ENST00000480127 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.44
COL17A1-205ENST00000480127 ZCCHC11Q5TAX3 1644 aaKnown RBP12.27□□□□□ -0.44
COL17A1-205ENST00000480127 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
COL17A1-205ENST00000480127 KIAA0556O60303 1618 aa12.25□□□□□ -0.45
COL17A1-205ENST00000480127 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
COL17A1-205ENST00000480127 WDR7Q9Y4E6 1490 aa12.22□□□□□ -0.45
COL17A1-205ENST00000480127 MAGI3Q5TCQ9 1506 aa12.19□□□□□ -0.46
COL17A1-205ENST00000480127 CD109Q6YHK3 1445 aa12.19□□□□□ -0.46
COL17A1-205ENST00000480127 ABCA8O94911 1581 aa12.17□□□□□ -0.46
COL17A1-205ENST00000480127 KCNH8Q96L42 1107 aa12.16□□□□□ -0.46
COL17A1-205ENST00000480127 CFAP43Q8NDM7 1665 aa12.15□□□□□ -0.46
COL17A1-205ENST00000480127 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
COL17A1-205ENST00000480127 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
COL17A1-205ENST00000480127 KIF21BO75037 1637 aa12.11□□□□□ -0.47
COL17A1-205ENST00000480127 ARAP3Q8WWN8 1544 aa12.1□□□□□ -0.47
COL17A1-205ENST00000480127 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
COL17A1-205ENST00000480127 ATP10BO94823 1461 aa12.08□□□□□ -0.48
COL17A1-205ENST00000480127 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
COL17A1-205ENST00000480127 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
COL17A1-205ENST00000480127 PTPRMP28827 1452 aa12.04□□□□□ -0.48
COL17A1-205ENST00000480127 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
COL17A1-205ENST00000480127 FBXO41Q8TF61 875 aa12.04□□□□□ -0.48
COL17A1-205ENST00000480127 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
COL17A1-205ENST00000480127 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
COL17A1-205ENST00000480127 RAPGEF3O95398 923 aa12.03□□□□□ -0.48
COL17A1-205ENST00000480127 NEO1Q92859 1461 aa12□□□□□ -0.49
COL17A1-205ENST00000480127 FAM9AQ8IZU1 332 aaPredicted RBP11.99□□□□□ -0.49
COL17A1-205ENST00000480127 FRMPD1Q5SYB0 1578 aa11.99□□□□□ -0.49
COL17A1-205ENST00000480127 BCORL1Q5H9F3 1711 aa11.98□□□□□ -0.49
COL17A1-205ENST00000480127 SAMD9Q5K651 1589 aa11.98□□□□□ -0.49
COL17A1-205ENST00000480127 RAPGEF6Q8TEU7 1601 aa11.97□□□□□ -0.49
COL17A1-205ENST00000480127 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
COL17A1-205ENST00000480127 PCF11O94913 1555 aaKnown RBP11.96□□□□□ -0.5
COL17A1-205ENST00000480127 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
COL17A1-205ENST00000480127 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
COL17A1-205ENST00000480127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
COL17A1-205ENST00000480127 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
COL17A1-205ENST00000480127 ARID4BQ4LE39 1312 aaPredicted RBP11.94□□□□□ -0.5
COL17A1-205ENST00000480127 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
COL17A1-205ENST00000480127 ARHGEF40Q8TER5 1519 aa11.92□□□□□ -0.5
COL17A1-205ENST00000480127 DENND4BO75064 1496 aaPredicted RBP11.91□□□□□ -0.5
COL17A1-205ENST00000480127 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
COL17A1-205ENST00000480127 AKNAQ7Z591 1439 aa11.91□□□□□ -0.5
COL17A1-205ENST00000480127 RICTORQ6R327 1708 aa11.9□□□□□ -0.5
COL17A1-205ENST00000480127 RIMS1Q86UR5 1692 aaKnown RBP11.9□□□□□ -0.5
COL17A1-205ENST00000480127 PLEKHD1A6NEE1 506 aa11.89□□□□□ -0.51
COL17A1-205ENST00000480127 HSPA2P54652 639 aa11.89□□□□□ -0.51
COL17A1-205ENST00000480127 FANCAO15360 1455 aa11.89□□□□□ -0.51
COL17A1-205ENST00000480127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL17A1-205ENST00000480127 RANGAP1P46060 587 aaPredicted RBP11.88□□□□□ -0.51
COL17A1-205ENST00000480127 SIGLEC1Q9BZZ2 1709 aa11.87□□□□□ -0.51
COL17A1-205ENST00000480127 YEATS2Q9ULM3 1422 aa11.86□□□□□ -0.51
COL17A1-205ENST00000480127 ZMYM4Q5VZL5 1548 aa11.86□□□□□ -0.51
COL17A1-205ENST00000480127 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
COL17A1-205ENST00000480127 TTC37Q6PGP7 1564 aa11.85□□□□□ -0.51
COL17A1-205ENST00000480127 CFAP74Q9C0B2 1584 aa11.85□□□□□ -0.51
COL17A1-205ENST00000480127 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
COL17A1-205ENST00000480127 ZFYVE16Q7Z3T8 1539 aa11.85□□□□□ -0.51
COL17A1-205ENST00000480127 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
COL17A1-205ENST00000480127 EFCAB5A4FU69 1503 aa11.83□□□□□ -0.52
COL17A1-205ENST00000480127 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
COL17A1-205ENST00000480127 MLECQ14165 292 aa11.82□□□□□ -0.52
COL17A1-205ENST00000480127 CERKQ8TCT0 537 aa11.82□□□□□ -0.52
COL17A1-205ENST00000480127 EEA1Q15075 1411 aa11.82□□□□□ -0.52
COL17A1-205ENST00000480127 PLCH2O75038 1416 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms