RNA–Protein interactions for RNA: ENST00000480045.5

LRP8-209, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 3,231 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-209ENST00000480045 CUX2O14529 1486 aa27.86■■■□□ 2.05
LRP8-209ENST00000480045 NBR1Q14596 966 aa27.86■■■□□ 2.05
LRP8-209ENST00000480045 MYT1LQ9UL68 1186 aa27.81■■■□□ 2.04
LRP8-209ENST00000480045 FAM50AQ14320 339 aaKnown RBP27.81■■■□□ 2.04
LRP8-209ENST00000480045 SETD5Q9C0A6 1442 aa27.75■■■□□ 2.03
LRP8-209ENST00000480045 PABPN1Q86U42 306 aaKnown RBP eCLIP27.72■■■□□ 2.03
LRP8-209ENST00000480045 B4GALNT3Q6L9W6 998 aa27.71■■■□□ 2.03
LRP8-209ENST00000480045 ANO8Q9HCE9 1232 aaPredicted RBP27.7■■■□□ 2.03
LRP8-209ENST00000480045 PPP4R2Q9NY27 417 aa27.68■■■□□ 2.02
LRP8-209ENST00000480045 NOP58Q9Y2X3 529 aaKnown RBP27.64■■■□□ 2.02
LRP8-209ENST00000480045 PAK3O75914 559 aaPredicted RBP27.62■■■□□ 2.01
LRP8-209ENST00000480045 PRXQ9BXM0 1461 aa27.61■■■□□ 2.01
LRP8-209ENST00000480045 TIMELESSQ9UNS1 1208 aa27.59■■■□□ 2.01
LRP8-209ENST00000480045 ATP1B4Q9UN42 357 aaPredicted RBP27.58■■■□□ 2.01
LRP8-209ENST00000480045 TONSLQ96HA7 1378 aa27.55■■■□□ 2
LRP8-209ENST00000480045 ERICH3Q5RHP9 1530 aa27.53■■■□□ 2
LRP8-209ENST00000480045 ARHGAP35Q9NRY4 1499 aa27.51■■□□□ 1.99
LRP8-209ENST00000480045 ERICH6BQ5W0A0 696 aa27.49■■□□□ 1.99
LRP8-209ENST00000480045 FAM9BQ8IZU0 186 aa27.49■■□□□ 1.99
LRP8-209ENST00000480045 PHLDB1Q86UU1 1377 aa27.49■■□□□ 1.99
LRP8-209ENST00000480045 RTL5Q5HYW3 569 aaPredicted RBP27.48■■□□□ 1.99
LRP8-209ENST00000480045 SALL2Q9Y467 1007 aaPredicted RBP27.48■■□□□ 1.99
LRP8-209ENST00000480045 CCDC184Q52MB2 194 aa27.45■■□□□ 1.98
LRP8-209ENST00000480045 RTN4Q9NQC3 1192 aaKnown RBP27.44■■□□□ 1.98
LRP8-209ENST00000480045 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
LRP8-209ENST00000480045 CCDC136Q96JN2 1154 aa27.4■■□□□ 1.98
LRP8-209ENST00000480045 P3H3Q8IVL6 736 aa27.38■■□□□ 1.97
LRP8-209ENST00000480045 ANP32AP39687 249 aaKnown RBP27.37■■□□□ 1.97
LRP8-209ENST00000480045 IL27Q8NEV9 243 aa27.37■■□□□ 1.97
LRP8-209ENST00000480045 KIF27Q86VH2 1401 aa27.35■■□□□ 1.97
LRP8-209ENST00000480045 ZBTB47Q9UFB7 747 aaPredicted RBP27.33■■□□□ 1.97
LRP8-209ENST00000480045 MRS2Q9HD23 443 aa27.31■■□□□ 1.96
LRP8-209ENST00000480045 WASHC2AQ641Q2 1341 aa27.31■■□□□ 1.96
LRP8-209ENST00000480045 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
LRP8-209ENST00000480045 TIAM1Q13009 1591 aa27.29■■□□□ 1.96
LRP8-209ENST00000480045 IPO9Q96P70 1041 aaKnown RBP27.29■■□□□ 1.96
LRP8-209ENST00000480045 HSPA5P11021 654 aaKnown RBP27.28■■□□□ 1.96
LRP8-209ENST00000480045 CNGB1Q14028 1251 aaPredicted RBP27.27■■□□□ 1.96
LRP8-209ENST00000480045 ATAD2BQ9ULI0 1458 aa27.25■■□□□ 1.95
LRP8-209ENST00000480045 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.24■■□□□ 1.95
LRP8-209ENST00000480045 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
LRP8-209ENST00000480045 SENP3-EIF4A1A0A087X0R7 540 aa27.22■■□□□ 1.95
LRP8-209ENST00000480045 PEG3Q9GZU2 1588 aa27.21■■□□□ 1.95
LRP8-209ENST00000480045 NPM2Q86SE8 214 aaKnown RBP27.2■■□□□ 1.94
LRP8-209ENST00000480045 ZBED9Q6R2W3 1325 aa27.18■■□□□ 1.94
LRP8-209ENST00000480045 PRKRIP1Q9H875 184 aaPredicted RBP27.16■■□□□ 1.94
LRP8-209ENST00000480045 BIVM-ERCC5R4GMW8 1640 aa27.14■■□□□ 1.94
LRP8-209ENST00000480045 EIF4G2P78344 907 aaKnown RBP eCLIP27.14■■□□□ 1.934e-7■■■■□ 23.1
LRP8-209ENST00000480045 FHAD1B1AJZ9 1412 aa27.13■■□□□ 1.93
LRP8-209ENST00000480045 LAS1LQ9Y4W2 734 aaKnown RBP27.12■■□□□ 1.93
LRP8-209ENST00000480045 AKNAQ7Z591 1439 aa27.1■■□□□ 1.93
LRP8-209ENST00000480045 MAP3K1Q13233 1512 aa27.08■■□□□ 1.93
LRP8-209ENST00000480045 CCDC18Q5T9S5 1454 aa27.08■■□□□ 1.93
LRP8-209ENST00000480045 CUX1P39880 1505 aa27.08■■□□□ 1.93
LRP8-209ENST00000480045 C11orf95C9JLR9 678 aaPredicted RBP27.07■■□□□ 1.92
LRP8-209ENST00000480045 NEFMP07197 916 aa27.06■■□□□ 1.92
LRP8-209ENST00000480045 CNTLNQ9NXG0 1405 aa27.04■■□□□ 1.92
LRP8-209ENST00000480045 UACAQ9BZF9 1416 aa27.02■■□□□ 1.92
LRP8-209ENST00000480045 IGF1RP08069 1367 aa27■■□□□ 1.91
LRP8-209ENST00000480045 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
LRP8-209ENST00000480045 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
LRP8-209ENST00000480045 POLR3GLQ9BT43 218 aa26.95■■□□□ 1.9
LRP8-209ENST00000480045 RRP7BPQ9NSQ0 103 aa26.94■■□□□ 1.9
LRP8-209ENST00000480045 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.96e-7■■■■□ 26.7
LRP8-209ENST00000480045 NUDCQ9Y266 331 aa26.94■■□□□ 1.9
LRP8-209ENST00000480045 PTPRKQ15262 1439 aa26.93■■□□□ 1.9
LRP8-209ENST00000480045 CHIC2Q9UKJ5 165 aa26.93■■□□□ 1.9
LRP8-209ENST00000480045 CCDC7Q96M83 1385 aa26.92■■□□□ 1.9
LRP8-209ENST00000480045 FHOD3Q2V2M9 1422 aa26.92■■□□□ 1.9
LRP8-209ENST00000480045 FGD6Q6ZV73 1430 aa26.9■■□□□ 1.9
LRP8-209ENST00000480045 PCF11O94913 1555 aaKnown RBP26.9■■□□□ 1.9
LRP8-209ENST00000480045 EIF5BO60841 1220 aaKnown RBP26.89■■□□□ 1.9
LRP8-209ENST00000480045 L3MBTL2Q969R5 705 aa26.89■■□□□ 1.89
LRP8-209ENST00000480045 HFM1A2PYH4 1435 aa26.89■■□□□ 1.89
LRP8-209ENST00000480045 KDM5BQ9UGL1 1544 aa26.88■■□□□ 1.89
LRP8-209ENST00000480045 FOXD1Q16676 465 aa26.87■■□□□ 1.89
LRP8-209ENST00000480045 NCOA2Q15596 1464 aa26.87■■□□□ 1.89
LRP8-209ENST00000480045 SMG6Q86US8 1419 aaKnown RBP26.87■■□□□ 1.89
LRP8-209ENST00000480045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.86■■□□□ 1.895e-10■■■■■ 69.7
LRP8-209ENST00000480045 BRPF3Q9ULD4 1205 aa26.85■■□□□ 1.89
LRP8-209ENST00000480045 MTUS2Q5JR59 1369 aa26.84■■□□□ 1.89
LRP8-209ENST00000480045 NAIPQ13075 1403 aa26.83■■□□□ 1.89
LRP8-209ENST00000480045 KIF7Q2M1P5 1343 aa26.8■■□□□ 1.88
LRP8-209ENST00000480045 FMN1Q68DA7 1419 aa26.8■■□□□ 1.88
LRP8-209ENST00000480045 USP35Q9P2H5 1018 aa26.79■■□□□ 1.88
LRP8-209ENST00000480045 NCOA1Q15788 1441 aa26.79■■□□□ 1.88
LRP8-209ENST00000480045 PDE4AP27815 886 aa26.79■■□□□ 1.88
LRP8-209ENST00000480045 PTPN23Q9H3S7 1636 aa26.78■■□□□ 1.88
LRP8-209ENST00000480045 CFAP43Q8NDM7 1665 aa26.77■■□□□ 1.88
LRP8-209ENST00000480045 RNF123Q5XPI4 1314 aa26.77■■□□□ 1.88
LRP8-209ENST00000480045 PPM1GO15355 546 aaPredicted RBP26.75■■□□□ 1.87
LRP8-209ENST00000480045 EXOC6Q8TAG9 804 aa26.74■■□□□ 1.87
LRP8-209ENST00000480045 NBPF8Q3BBV2 869 aa26.73■■□□□ 1.87
LRP8-209ENST00000480045 UBE2Q2Q8WVN8 375 aa26.72■■□□□ 1.87
LRP8-209ENST00000480045 TCERG1O14776 1098 aaKnown RBP26.71■■□□□ 1.87
LRP8-209ENST00000480045 WASHC2CQ9Y4E1 1318 aa26.71■■□□□ 1.87
LRP8-209ENST00000480045 NCAPD3P42695 1498 aa26.7■■□□□ 1.86
LRP8-209ENST00000480045 MPHOSPH9Q99550 1183 aa26.69■■□□□ 1.86
LRP8-209ENST00000480045 FYCO1Q9BQS8 1478 aa26.68■■□□□ 1.86
LRP8-209ENST00000480045 CASKIN1Q8WXD9 1431 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms