RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 CWC22Q9HCG8 908 aaKnown RBP12.06□□□□□ -0.48
TTC3-216ENST00000479930 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
TTC3-216ENST00000479930 MSH5O43196 834 aa12.03□□□□□ -0.48
TTC3-216ENST00000479930 EIF5BO60841 1220 aaKnown RBP12.03□□□□□ -0.48
TTC3-216ENST00000479930 NAP1L2Q9ULW6 460 aaPredicted RBP12.02□□□□□ -0.49
TTC3-216ENST00000479930 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
TTC3-216ENST00000479930 MYH16Q9H6N6 1097 aa11.98□□□□□ -0.49
TTC3-216ENST00000479930 UPF2Q9HAU5 1272 aaKnown RBP11.98□□□□□ -0.49
TTC3-216ENST00000479930 MEX3CQ5U5Q3 659 aaKnown RBP11.97□□□□□ -0.49
TTC3-216ENST00000479930 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
TTC3-216ENST00000479930 NCLP19338 710 aaKnown RBP11.95□□□□□ -0.5
TTC3-216ENST00000479930 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
TTC3-216ENST00000479930 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
TTC3-216ENST00000479930 PPM1FP49593 454 aaPredicted RBP11.91□□□□□ -0.5
TTC3-216ENST00000479930 NISCHQ9Y2I1 1504 aa11.9□□□□□ -0.5
TTC3-216ENST00000479930 ZNF330Q9Y3S2 320 aaPredicted RBP11.9□□□□□ -0.5
TTC3-216ENST00000479930 VPS53Q5VIR6 699 aa11.89□□□□□ -0.51
TTC3-216ENST00000479930 EIF4G2P78344 907 aaKnown RBP eCLIP11.89□□□□□ -0.516e-6■■■■■ 27.4
TTC3-216ENST00000479930 NOC3LQ8WTT2 800 aaKnown RBP11.89□□□□□ -0.51
TTC3-216ENST00000479930 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
TTC3-216ENST00000479930 ANP32EQ9BTT0 268 aa11.88□□□□□ -0.51
TTC3-216ENST00000479930 PPM1GO15355 546 aaPredicted RBP11.87□□□□□ -0.51
TTC3-216ENST00000479930 FGD1P98174 961 aa11.86□□□□□ -0.51
TTC3-216ENST00000479930 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
TTC3-216ENST00000479930 ANP32CO43423 234 aa11.85□□□□□ -0.51
TTC3-216ENST00000479930 PNNQ9H307 717 aaKnown RBP11.85□□□□□ -0.51
TTC3-216ENST00000479930 OS9Q13438 667 aaPredicted RBP11.84□□□□□ -0.51
TTC3-216ENST00000479930 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
TTC3-216ENST00000479930 CTDP1Q9Y5B0 961 aaPredicted RBP11.83□□□□□ -0.52
TTC3-216ENST00000479930 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
TTC3-216ENST00000479930 AK7Q96M32 723 aa11.82□□□□□ -0.52
TTC3-216ENST00000479930 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
TTC3-216ENST00000479930 FOXD1Q16676 465 aa11.8□□□□□ -0.52
TTC3-216ENST00000479930 ACIN1Q9UKV3 1341 aaKnown RBP11.8□□□□□ -0.52
TTC3-216ENST00000479930 PPP1R1BQ9UD71 204 aaPredicted RBP11.8□□□□□ -0.52
TTC3-216ENST00000479930 PLCB2Q00722 1185 aa11.78□□□□□ -0.52
TTC3-216ENST00000479930 A0A0U1RQG5 324 aaPredicted RBP11.78□□□□□ -0.52
TTC3-216ENST00000479930 LAS1LQ9Y4W2 734 aaKnown RBP11.78□□□□□ -0.52
TTC3-216ENST00000479930 ERICH6BQ5W0A0 696 aa11.77□□□□□ -0.52
TTC3-216ENST00000479930 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
TTC3-216ENST00000479930 PTMAP06454 111 aaKnown RBP11.76□□□□□ -0.53
TTC3-216ENST00000479930 PAF1Q8N7H5 531 aa11.76□□□□□ -0.53
TTC3-216ENST00000479930 SOX12O15370 315 aa11.75□□□□□ -0.53
TTC3-216ENST00000479930 MLECQ14165 292 aa11.74□□□□□ -0.53
TTC3-216ENST00000479930 DNTTIP2Q5QJE6 756 aaKnown RBP11.74□□□□□ -0.53
TTC3-216ENST00000479930 RAD21O60216 631 aa11.74□□□□□ -0.53
TTC3-216ENST00000479930 TMC1Q8TDI8 760 aa11.74□□□□□ -0.53
TTC3-216ENST00000479930 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.74□□□□□ -0.531e-6■■■■■ 52.2
TTC3-216ENST00000479930 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.53
TTC3-216ENST00000479930 KCNJ4P48050 445 aa11.73□□□□□ -0.53
TTC3-216ENST00000479930 GNL2Q13823 731 aaKnown RBP11.73□□□□□ -0.53
TTC3-216ENST00000479930 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.73□□□□□ -0.53
TTC3-216ENST00000479930 CEP89Q96ST8 783 aa11.73□□□□□ -0.53
TTC3-216ENST00000479930 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
TTC3-216ENST00000479930 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
TTC3-216ENST00000479930 GOLGA6L6A8MZA4 724 aa11.71□□□□□ -0.53
TTC3-216ENST00000479930 CHAF1AQ13111 956 aaPredicted RBP11.71□□□□□ -0.54
TTC3-216ENST00000479930 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.54
TTC3-216ENST00000479930 MARCH6O60337 910 aa11.7□□□□□ -0.54
TTC3-216ENST00000479930 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
TTC3-216ENST00000479930 GLIPR1L2Q4G1C9 344 aa11.69□□□□□ -0.54
TTC3-216ENST00000479930 CASC1Q6TDU7 716 aa11.69□□□□□ -0.54
TTC3-216ENST00000479930 TRIM34Q9BYJ4 488 aa11.68□□□□□ -0.54
TTC3-216ENST00000479930 GTF2E1P29083 439 aaPredicted RBP11.68□□□□□ -0.54
TTC3-216ENST00000479930 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
TTC3-216ENST00000479930 KCNH8Q96L42 1107 aa11.68□□□□□ -0.54
TTC3-216ENST00000479930 CCAR1Q8IX12 1150 aaKnown RBP11.68□□□□□ -0.54
TTC3-216ENST00000479930 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
TTC3-216ENST00000479930 L1TD1Q5T7N2 865 aaKnown RBP11.66□□□□□ -0.54
TTC3-216ENST00000479930 FRAT2O75474 233 aaPredicted RBP11.66□□□□□ -0.54
TTC3-216ENST00000479930 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
TTC3-216ENST00000479930 PLCD3Q8N3E9 789 aa11.66□□□□□ -0.54
TTC3-216ENST00000479930 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
TTC3-216ENST00000479930 CCDC97Q96F63 343 aaPredicted RBP11.64□□□□□ -0.55
TTC3-216ENST00000479930 CREBRFQ8IUR6 639 aa11.63□□□□□ -0.55
TTC3-216ENST00000479930 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
TTC3-216ENST00000479930 RRP12Q5JTH9 1297 aaKnown RBP11.61□□□□□ -0.55
TTC3-216ENST00000479930 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
TTC3-216ENST00000479930 IBSPP21815 317 aaPredicted RBP11.61□□□□□ -0.55
TTC3-216ENST00000479930 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
TTC3-216ENST00000479930 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
TTC3-216ENST00000479930 RASSF8Q8NHQ8 419 aa11.61□□□□□ -0.55
TTC3-216ENST00000479930 TAF7LQ5H9L4 462 aa11.6□□□□□ -0.55
TTC3-216ENST00000479930 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
TTC3-216ENST00000479930 POGKQ9P215 609 aa11.57□□□□□ -0.56
TTC3-216ENST00000479930 PATL2C9JE40 543 aaKnown RBP11.57□□□□□ -0.56
TTC3-216ENST00000479930 STAC3Q96MF2 364 aa11.56□□□□□ -0.56
TTC3-216ENST00000479930 NRDCO43847 1150 aa11.55□□□□□ -0.56
TTC3-216ENST00000479930 GOLGA6L22H0YM25 854 aa11.55□□□□□ -0.56
TTC3-216ENST00000479930 GOLGA6L4A6NEF3 574 aa11.55□□□□□ -0.56
TTC3-216ENST00000479930 GORABQ5T7V8 394 aa11.54□□□□□ -0.56
TTC3-216ENST00000479930 TMEM87AQ8NBN3 555 aa11.54□□□□□ -0.56
TTC3-216ENST00000479930 WWC2Q6AWC2 1192 aa11.53□□□□□ -0.56
TTC3-216ENST00000479930 FAM9BQ8IZU0 186 aa11.53□□□□□ -0.56
TTC3-216ENST00000479930 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.53□□□□□ -0.56
TTC3-216ENST00000479930 DRC7Q8IY82 874 aa11.52□□□□□ -0.56
TTC3-216ENST00000479930 TMEM132AQ24JP5 1023 aa11.52□□□□□ -0.57
TTC3-216ENST00000479930 TOMM22Q9NS69 142 aa11.51□□□□□ -0.57
TTC3-216ENST00000479930 SRPK2P78362 688 aaKnown RBP11.51□□□□□ -0.57
TTC3-216ENST00000479930 EVA1CP58658 441 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms