RNA–Protein interactions for RNA: ENST00000479788.5

DUSP28-204, Transcript of dual specificity phosphatase 28, humanhuman

TSL 3

Gene DUSP28, Length 450 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-204ENST00000479788 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
DUSP28-204ENST00000479788 SMARCA4P51532 1647 aa10.96□□□□□ -0.65
DUSP28-204ENST00000479788 ZRANB1Q9UGI0 708 aa10.93□□□□□ -0.66
DUSP28-204ENST00000479788 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
DUSP28-204ENST00000479788 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
DUSP28-204ENST00000479788 SMARCA2P51531 1590 aa10.91□□□□□ -0.66
DUSP28-204ENST00000479788 NCAPD3P42695 1498 aa10.9□□□□□ -0.66
DUSP28-204ENST00000479788 ATAD2BQ9ULI0 1458 aa10.9□□□□□ -0.66
DUSP28-204ENST00000479788 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
DUSP28-204ENST00000479788 BAZ1BQ9UIG0 1483 aaKnown RBP10.84□□□□□ -0.67
DUSP28-204ENST00000479788 MROH2BQ7Z745 1585 aa10.83□□□□□ -0.68
DUSP28-204ENST00000479788 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
DUSP28-204ENST00000479788 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
DUSP28-204ENST00000479788 PEG3Q9GZU2 1588 aa10.81□□□□□ -0.68
DUSP28-204ENST00000479788 OTUD5Q96G74 571 aa10.78□□□□□ -0.68
DUSP28-204ENST00000479788 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
DUSP28-204ENST00000479788 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
DUSP28-204ENST00000479788 WIZO95785 1651 aa10.76□□□□□ -0.69
DUSP28-204ENST00000479788 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
DUSP28-204ENST00000479788 POTEB2H3BUK9 544 aa10.72□□□□□ -0.69
DUSP28-204ENST00000479788 NESP48681 1621 aa10.72□□□□□ -0.69
DUSP28-204ENST00000479788 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
DUSP28-204ENST00000479788 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
DUSP28-204ENST00000479788 LAMC3Q9Y6N6 1575 aa10.69□□□□□ -0.7
DUSP28-204ENST00000479788 CUX2O14529 1486 aa10.66□□□□□ -0.7
DUSP28-204ENST00000479788 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.7
DUSP28-204ENST00000479788 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
DUSP28-204ENST00000479788 KIF21AQ7Z4S6 1674 aa10.64□□□□□ -0.71
DUSP28-204ENST00000479788 RSF1Q96T23 1441 aaPredicted RBP10.64□□□□□ -0.71
DUSP28-204ENST00000479788 C7P10643 843 aa10.63□□□□□ -0.71
DUSP28-204ENST00000479788 POTEMA6NI47 508 aa10.62□□□□□ -0.71
DUSP28-204ENST00000479788 PDS5BQ9NTI5 1447 aa10.61□□□□□ -0.71
DUSP28-204ENST00000479788 SLC39A7Q92504 469 aa10.61□□□□□ -0.71
DUSP28-204ENST00000479788 PCDH10Q9P2E7 1040 aa10.61□□□□□ -0.71
DUSP28-204ENST00000479788 CADPSQ9ULU8 1353 aa10.6□□□□□ -0.71
DUSP28-204ENST00000479788 TOP2AP11388 1531 aaKnown RBP10.59□□□□□ -0.71
DUSP28-204ENST00000479788 ATMINO43313 823 aaPredicted RBP10.59□□□□□ -0.71
DUSP28-204ENST00000479788 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
DUSP28-204ENST00000479788 METRNQ9UJH8 293 aa10.59□□□□□ -0.71
DUSP28-204ENST00000479788 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
DUSP28-204ENST00000479788 POTEGQ6S5H5 508 aa10.58□□□□□ -0.72
DUSP28-204ENST00000479788 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
DUSP28-204ENST00000479788 POTEJP0CG39 1038 aa10.52□□□□□ -0.73
DUSP28-204ENST00000479788 PRDM2Q13029 1718 aa10.52□□□□□ -0.73
DUSP28-204ENST00000479788 PROM2Q8N271 834 aa10.51□□□□□ -0.73
DUSP28-204ENST00000479788 MRC2Q9UBG0 1479 aa10.5□□□□□ -0.73
DUSP28-204ENST00000479788 CEP164Q9UPV0 1460 aa10.5□□□□□ -0.73
DUSP28-204ENST00000479788 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
DUSP28-204ENST00000479788 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
DUSP28-204ENST00000479788 CFTRP13569 1480 aa10.49□□□□□ -0.73
DUSP28-204ENST00000479788 DNAJC5Q9H3Z4 198 aa10.48□□□□□ -0.73
DUSP28-204ENST00000479788 CCDC88BA6NC98 1476 aa10.47□□□□□ -0.73
DUSP28-204ENST00000479788 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
DUSP28-204ENST00000479788 WDR62O43379 1518 aa10.46□□□□□ -0.74
DUSP28-204ENST00000479788 ATN1P54259 1190 aaPredicted RBP10.45□□□□□ -0.74
DUSP28-204ENST00000479788 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
DUSP28-204ENST00000479788 SCUBE2Q9NQ36 999 aa10.45□□□□□ -0.74
DUSP28-204ENST00000479788 TIE1P35590 1138 aa10.4□□□□□ -0.74
DUSP28-204ENST00000479788 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
DUSP28-204ENST00000479788 URB2Q14146 1524 aaKnown RBP10.38□□□□□ -0.75
DUSP28-204ENST00000479788 BMP2KQ9NSY1 1161 aaPredicted RBP10.38□□□□□ -0.75
DUSP28-204ENST00000479788 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
DUSP28-204ENST00000479788 SUPT5HO00267 1087 aaKnown RBP10.36□□□□□ -0.75
DUSP28-204ENST00000479788 PLEKHG5O94827 1062 aa10.36□□□□□ -0.75
DUSP28-204ENST00000479788 FAM163AQ96GL9 167 aaPredicted RBP10.36□□□□□ -0.75
DUSP28-204ENST00000479788 MAP3K13O43283 966 aa10.34□□□□□ -0.75
DUSP28-204ENST00000479788 SGIP1Q9BQI5 828 aa10.32□□□□□ -0.76
DUSP28-204ENST00000479788 TRPC6Q9Y210 931 aa10.31□□□□□ -0.76
DUSP28-204ENST00000479788 TOPBP1Q92547 1522 aa10.31□□□□□ -0.76
DUSP28-204ENST00000479788 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
DUSP28-204ENST00000479788 IER5LQ5T953 404 aa10.3□□□□□ -0.76
DUSP28-204ENST00000479788 DNMBPQ6XZF7 1577 aa10.3□□□□□ -0.76
DUSP28-204ENST00000479788 RASEFQ8IZ41 740 aa10.29□□□□□ -0.76
DUSP28-204ENST00000479788 MIER1Q8N108 512 aa10.29□□□□□ -0.76
DUSP28-204ENST00000479788 TTLL13PA6NNM8 815 aa10.28□□□□□ -0.76
DUSP28-204ENST00000479788 SEC24BO95487 1268 aa10.27□□□□□ -0.77
DUSP28-204ENST00000479788 IFT140Q96RY7 1462 aa10.27□□□□□ -0.77
DUSP28-204ENST00000479788 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
DUSP28-204ENST00000479788 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
DUSP28-204ENST00000479788 EIF4G3O43432 1585 aaKnown RBP10.22□□□□□ -0.77
DUSP28-204ENST00000479788 ZBTB47Q9UFB7 747 aaPredicted RBP10.21□□□□□ -0.77
DUSP28-204ENST00000479788 POLA1P09884 1462 aaPredicted RBP10.2□□□□□ -0.78
DUSP28-204ENST00000479788 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
DUSP28-204ENST00000479788 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
DUSP28-204ENST00000479788 PCDHB13Q9Y5F0 798 aa10.19□□□□□ -0.78
DUSP28-204ENST00000479788 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
DUSP28-204ENST00000479788 CUX1P39880 1505 aa10.17□□□□□ -0.78
DUSP28-204ENST00000479788 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.78
DUSP28-204ENST00000479788 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
DUSP28-204ENST00000479788 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
DUSP28-204ENST00000479788 SOGA1O94964 1423 aa10.17□□□□□ -0.78
DUSP28-204ENST00000479788 FKBP8Q14318 412 aa10.17□□□□□ -0.78
DUSP28-204ENST00000479788 CHD1O14646 1710 aa10.16□□□□□ -0.78
DUSP28-204ENST00000479788 NUBP1P53384 320 aa10.15□□□□□ -0.78
DUSP28-204ENST00000479788 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
DUSP28-204ENST00000479788 TRIM41Q8WV44 630 aa10.15□□□□□ -0.78
DUSP28-204ENST00000479788 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
DUSP28-204ENST00000479788 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
DUSP28-204ENST00000479788 SLAIN1Q8ND83 568 aa10.12□□□□□ -0.79
DUSP28-204ENST00000479788 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms