RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SHROOM2Q13796 1616 aa20.52■□□□□ 0.88
CCDC18-208ENST00000479653 FHAD1B1AJZ9 1412 aa20.52■□□□□ 0.87
CCDC18-208ENST00000479653 ADAMTS12P58397 1594 aa20.5■□□□□ 0.87
CCDC18-208ENST00000479653 KDM6BO15054 1643 aa20.49■□□□□ 0.87
CCDC18-208ENST00000479653 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
CCDC18-208ENST00000479653 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
CCDC18-208ENST00000479653 DIP2BQ9P265 1576 aa20.42■□□□□ 0.86
CCDC18-208ENST00000479653 TSPOAP1O95153 1857 aa20.33■□□□□ 0.84
CCDC18-208ENST00000479653 ADGRL1O94910 1474 aa20.32■□□□□ 0.84
CCDC18-208ENST00000479653 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
CCDC18-208ENST00000479653 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
CCDC18-208ENST00000479653 TTBK1Q5TCY1 1321 aaPredicted RBP20.29■□□□□ 0.84
CCDC18-208ENST00000479653 HECW2Q9P2P5 1572 aa20.25■□□□□ 0.83
CCDC18-208ENST00000479653 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
CCDC18-208ENST00000479653 FBXO41Q8TF61 875 aa20.19■□□□□ 0.82
CCDC18-208ENST00000479653 TOP2BQ02880 1626 aa20.19■□□□□ 0.82
CCDC18-208ENST00000479653 PTPRGP23470 1445 aa20.18■□□□□ 0.82
CCDC18-208ENST00000479653 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.81
CCDC18-208ENST00000479653 KIAA0586Q9BVV6 1533 aa20.14■□□□□ 0.81
CCDC18-208ENST00000479653 ASXL2Q76L83 1435 aa20.13■□□□□ 0.81
CCDC18-208ENST00000479653 COL17A1Q9UMD9 1497 aaPredicted RBP20.12■□□□□ 0.81
CCDC18-208ENST00000479653 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
CCDC18-208ENST00000479653 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
CCDC18-208ENST00000479653 ABCC2Q92887 1545 aa20.08■□□□□ 0.81
CCDC18-208ENST00000479653 GLI2P10070 1586 aa20.05■□□□□ 0.8
CCDC18-208ENST00000479653 TNIKQ9UKE5 1360 aa20.05■□□□□ 0.8
CCDC18-208ENST00000479653 PPRC1Q5VV67 1664 aaKnown RBP20.03■□□□□ 0.8
CCDC18-208ENST00000479653 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.79
CCDC18-208ENST00000479653 IGF1RP08069 1367 aa20■□□□□ 0.79
CCDC18-208ENST00000479653 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
CCDC18-208ENST00000479653 EPRSP07814 1512 aaKnown RBP19.97■□□□□ 0.79
CCDC18-208ENST00000479653 UACAQ9BZF9 1416 aa19.95■□□□□ 0.78
CCDC18-208ENST00000479653 UHRF1BP1LA0JNW5 1464 aa19.93■□□□□ 0.78
CCDC18-208ENST00000479653 CUL7Q14999 1698 aa19.91■□□□□ 0.78
CCDC18-208ENST00000479653 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
CCDC18-208ENST00000479653 MAP3K4Q9Y6R4 1608 aa19.89■□□□□ 0.77
CCDC18-208ENST00000479653 LMTK3Q96Q04 1460 aa19.86■□□□□ 0.77
CCDC18-208ENST00000479653 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
CCDC18-208ENST00000479653 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
CCDC18-208ENST00000479653 KDM5BQ9UGL1 1544 aa19.85■□□□□ 0.77
CCDC18-208ENST00000479653 CD109Q6YHK3 1445 aa19.8■□□□□ 0.76
CCDC18-208ENST00000479653 DISP1Q96F81 1524 aa19.78■□□□□ 0.76
CCDC18-208ENST00000479653 IQGAP2Q13576 1575 aa19.78■□□□□ 0.76
CCDC18-208ENST00000479653 WDR7Q9Y4E6 1490 aa19.77■□□□□ 0.76
CCDC18-208ENST00000479653 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
CCDC18-208ENST00000479653 PTPRMP28827 1452 aa19.73■□□□□ 0.75
CCDC18-208ENST00000479653 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
CCDC18-208ENST00000479653 KIF21BO75037 1637 aa19.72■□□□□ 0.75
CCDC18-208ENST00000479653 SOCS7O14512 581 aa19.69■□□□□ 0.74
CCDC18-208ENST00000479653 ILDR2Q71H61 639 aa19.69■□□□□ 0.74
CCDC18-208ENST00000479653 ARID4BQ4LE39 1312 aaPredicted RBP19.69■□□□□ 0.74
CCDC18-208ENST00000479653 DISP3Q9P2K9 1392 aa19.67■□□□□ 0.74
CCDC18-208ENST00000479653 CERKQ8TCT0 537 aa19.65■□□□□ 0.74
CCDC18-208ENST00000479653 HSPA2P54652 639 aa19.64■□□□□ 0.73
CCDC18-208ENST00000479653 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
CCDC18-208ENST00000479653 PCF11O94913 1555 aaKnown RBP19.62■□□□□ 0.73
CCDC18-208ENST00000479653 UGGT2Q9NYU1 1516 aa19.62■□□□□ 0.73
CCDC18-208ENST00000479653 RAPGEF3O95398 923 aa19.62■□□□□ 0.73
CCDC18-208ENST00000479653 CFAP43Q8NDM7 1665 aa19.61■□□□□ 0.73
CCDC18-208ENST00000479653 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
CCDC18-208ENST00000479653 ARAP3Q8WWN8 1544 aa19.6■□□□□ 0.73
CCDC18-208ENST00000479653 KIAA0556O60303 1618 aa19.59■□□□□ 0.73
CCDC18-208ENST00000479653 ADAMTSL3P82987 1691 aa19.58■□□□□ 0.72
CCDC18-208ENST00000479653 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
CCDC18-208ENST00000479653 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
CCDC18-208ENST00000479653 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
CCDC18-208ENST00000479653 MADDQ8WXG6 1647 aa19.5■□□□□ 0.71
CCDC18-208ENST00000479653 ABCA8O94911 1581 aa19.47■□□□□ 0.71
CCDC18-208ENST00000479653 GOLGA3Q08378 1498 aa19.47■□□□□ 0.71
CCDC18-208ENST00000479653 BCORL1Q5H9F3 1711 aa19.46■□□□□ 0.71
CCDC18-208ENST00000479653 FOXD1Q16676 465 aa19.44■□□□□ 0.7
CCDC18-208ENST00000479653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
CCDC18-208ENST00000479653 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
CCDC18-208ENST00000479653 P3H3Q8IVL6 736 aa19.42■□□□□ 0.7
CCDC18-208ENST00000479653 RIMS1Q86UR5 1692 aaKnown RBP19.4■□□□□ 0.7
CCDC18-208ENST00000479653 MLECQ14165 292 aa19.4■□□□□ 0.7
CCDC18-208ENST00000479653 ATP10BO94823 1461 aa19.4■□□□□ 0.7
CCDC18-208ENST00000479653 NEO1Q92859 1461 aa19.4■□□□□ 0.7
CCDC18-208ENST00000479653 POGZQ7Z3K3 1410 aa19.36■□□□□ 0.69
CCDC18-208ENST00000479653 ABCA9Q8IUA7 1624 aa19.34■□□□□ 0.69
CCDC18-208ENST00000479653 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
CCDC18-208ENST00000479653 FRMPD1Q5SYB0 1578 aa19.32■□□□□ 0.68
CCDC18-208ENST00000479653 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
CCDC18-208ENST00000479653 FANCAO15360 1455 aa19.29■□□□□ 0.68
CCDC18-208ENST00000479653 SPATA31D1Q6ZQQ2 1576 aa19.29■□□□□ 0.68
CCDC18-208ENST00000479653 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
CCDC18-208ENST00000479653 YEATS2Q9ULM3 1422 aa19.27■□□□□ 0.68
CCDC18-208ENST00000479653 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.68
CCDC18-208ENST00000479653 CEBPAP49715 358 aaPredicted RBP19.26■□□□□ 0.67
CCDC18-208ENST00000479653 CTTNBP2Q8WZ74 1663 aa19.26■□□□□ 0.67
CCDC18-208ENST00000479653 FHOD3Q2V2M9 1422 aa19.24■□□□□ 0.67
CCDC18-208ENST00000479653 PLEKHD1A6NEE1 506 aa19.22■□□□□ 0.67
CCDC18-208ENST00000479653 ZFYVE16Q7Z3T8 1539 aa19.19■□□□□ 0.66
CCDC18-208ENST00000479653 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
CCDC18-208ENST00000479653 RICTORQ6R327 1708 aa19.15■□□□□ 0.66
CCDC18-208ENST00000479653 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
CCDC18-208ENST00000479653 MAGI2Q86UL8 1455 aa19.14■□□□□ 0.65
CCDC18-208ENST00000479653 TTC37Q6PGP7 1564 aa19.14■□□□□ 0.65
CCDC18-208ENST00000479653 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
CCDC18-208ENST00000479653 SIGLEC1Q9BZZ2 1709 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms