RNA–Protein interactions for RNA: ENST00000478975.1

SFRP4-203, Transcript of secreted frizzled related protein 4, humanhuman

TSL 2

Gene SFRP4, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFRP4-203ENST00000478975 CUX2O14529 1486 aa13.57□□□□□ -0.24
SFRP4-203ENST00000478975 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
SFRP4-203ENST00000478975 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
SFRP4-203ENST00000478975 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
SFRP4-203ENST00000478975 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
SFRP4-203ENST00000478975 PROM2Q8N271 834 aa13.5□□□□□ -0.25
SFRP4-203ENST00000478975 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
SFRP4-203ENST00000478975 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
SFRP4-203ENST00000478975 LHX8Q68G74 356 aa13.43□□□□□ -0.26
SFRP4-203ENST00000478975 POTEIP0CG38 1075 aa13.42□□□□□ -0.26
SFRP4-203ENST00000478975 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
SFRP4-203ENST00000478975 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
SFRP4-203ENST00000478975 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
SFRP4-203ENST00000478975 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
SFRP4-203ENST00000478975 NESP48681 1621 aa13.32□□□□□ -0.28
SFRP4-203ENST00000478975 MIER1Q8N108 512 aa13.32□□□□□ -0.28
SFRP4-203ENST00000478975 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
SFRP4-203ENST00000478975 TRIM41Q8WV44 630 aa13.27□□□□□ -0.29
SFRP4-203ENST00000478975 HMGXB3Q12766 1538 aa13.27□□□□□ -0.29
SFRP4-203ENST00000478975 SMARCA2P51531 1590 aa13.27□□□□□ -0.29
SFRP4-203ENST00000478975 THOC2Q8NI27 1593 aaKnown RBP13.26□□□□□ -0.29
SFRP4-203ENST00000478975 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
SFRP4-203ENST00000478975 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
SFRP4-203ENST00000478975 FKBP8Q14318 412 aa13.22□□□□□ -0.29
SFRP4-203ENST00000478975 PLCD3Q8N3E9 789 aa13.22□□□□□ -0.29
SFRP4-203ENST00000478975 KIF21AQ7Z4S6 1674 aa13.19□□□□□ -0.3
SFRP4-203ENST00000478975 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
SFRP4-203ENST00000478975 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
SFRP4-203ENST00000478975 MS4A3Q96HJ5 214 aa13.17□□□□□ -0.3
SFRP4-203ENST00000478975 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
SFRP4-203ENST00000478975 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
SFRP4-203ENST00000478975 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
SFRP4-203ENST00000478975 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
SFRP4-203ENST00000478975 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
SFRP4-203ENST00000478975 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
SFRP4-203ENST00000478975 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
SFRP4-203ENST00000478975 PEG3Q9GZU2 1588 aa13.07□□□□□ -0.32
SFRP4-203ENST00000478975 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
SFRP4-203ENST00000478975 ATMINO43313 823 aaPredicted RBP13.05□□□□□ -0.32
SFRP4-203ENST00000478975 SLC39A7Q92504 469 aa13.02□□□□□ -0.33
SFRP4-203ENST00000478975 MAP3K13O43283 966 aa13.01□□□□□ -0.33
SFRP4-203ENST00000478975 C7P10643 843 aa13.01□□□□□ -0.33
SFRP4-203ENST00000478975 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
SFRP4-203ENST00000478975 METRNQ9UJH8 293 aa13□□□□□ -0.33
SFRP4-203ENST00000478975 FBXO3Q9UK99 471 aa13□□□□□ -0.33
SFRP4-203ENST00000478975 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
SFRP4-203ENST00000478975 WDR62O43379 1518 aa12.98□□□□□ -0.33
SFRP4-203ENST00000478975 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
SFRP4-203ENST00000478975 NUBP1P53384 320 aa12.97□□□□□ -0.33
SFRP4-203ENST00000478975 ATN1P54259 1190 aaPredicted RBP12.96□□□□□ -0.33
SFRP4-203ENST00000478975 CADPSQ9ULU8 1353 aa12.95□□□□□ -0.34
SFRP4-203ENST00000478975 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
SFRP4-203ENST00000478975 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
SFRP4-203ENST00000478975 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
SFRP4-203ENST00000478975 TIE1P35590 1138 aa12.92□□□□□ -0.34
SFRP4-203ENST00000478975 SGIP1Q9BQI5 828 aa12.91□□□□□ -0.34
SFRP4-203ENST00000478975 TRPC6Q9Y210 931 aa12.91□□□□□ -0.34
SFRP4-203ENST00000478975 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
SFRP4-203ENST00000478975 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
SFRP4-203ENST00000478975 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
SFRP4-203ENST00000478975 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
SFRP4-203ENST00000478975 WIZO95785 1651 aa12.85□□□□□ -0.35
SFRP4-203ENST00000478975 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
SFRP4-203ENST00000478975 FANCD2Q9BXW9 1451 aa12.84□□□□□ -0.35
SFRP4-203ENST00000478975 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
SFRP4-203ENST00000478975 RIMBP3CA6NJZ7 1639 aa12.81□□□□□ -0.36
SFRP4-203ENST00000478975 RIMBP3BA6NNM3 1639 aa12.81□□□□□ -0.36
SFRP4-203ENST00000478975 RIMBP3Q9UFD9 1639 aa12.81□□□□□ -0.36
SFRP4-203ENST00000478975 IFNL1Q8IU54 200 aa12.8□□□□□ -0.36
SFRP4-203ENST00000478975 SEC24BO95487 1268 aa12.79□□□□□ -0.36
SFRP4-203ENST00000478975 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
SFRP4-203ENST00000478975 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
SFRP4-203ENST00000478975 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
SFRP4-203ENST00000478975 SCUBE2Q9NQ36 999 aa12.77□□□□□ -0.37
SFRP4-203ENST00000478975 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
SFRP4-203ENST00000478975 POTEFA5A3E0 1075 aa12.74□□□□□ -0.37
SFRP4-203ENST00000478975 PYGBP11216 843 aa12.74□□□□□ -0.37
SFRP4-203ENST00000478975 IER5LQ5T953 404 aa12.74□□□□□ -0.37
SFRP4-203ENST00000478975 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
SFRP4-203ENST00000478975 CFTRP13569 1480 aa12.73□□□□□ -0.37
SFRP4-203ENST00000478975 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
SFRP4-203ENST00000478975 COLQQ9Y215 455 aaPredicted RBP12.71□□□□□ -0.37
SFRP4-203ENST00000478975 GSE1Q14687 1217 aa12.7□□□□□ -0.38
SFRP4-203ENST00000478975 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
SFRP4-203ENST00000478975 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
SFRP4-203ENST00000478975 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
SFRP4-203ENST00000478975 CYB5RLQ6IPT4 315 aa12.64□□□□□ -0.39
SFRP4-203ENST00000478975 TOP2AP11388 1531 aaKnown RBP12.63□□□□□ -0.39
SFRP4-203ENST00000478975 PLCG2P16885 1265 aa12.63□□□□□ -0.39
SFRP4-203ENST00000478975 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
SFRP4-203ENST00000478975 POTEMA6NI47 508 aa12.62□□□□□ -0.39
SFRP4-203ENST00000478975 CHD1O14646 1710 aa12.62□□□□□ -0.39
SFRP4-203ENST00000478975 EIF4G3O43432 1585 aaKnown RBP12.6□□□□□ -0.39
SFRP4-203ENST00000478975 POTEGQ6S5H5 508 aa12.6□□□□□ -0.39
SFRP4-203ENST00000478975 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
SFRP4-203ENST00000478975 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
SFRP4-203ENST00000478975 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
SFRP4-203ENST00000478975 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
SFRP4-203ENST00000478975 RSF1Q96T23 1441 aaPredicted RBP12.56□□□□□ -0.4
SFRP4-203ENST00000478975 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms