RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 ABCC10Q5T3U5 1492 aa19.14■□□□□ 0.65
APTX-222ENST00000478279 NPM1P06748 294 aaKnown RBP eCLIP19.13■□□□□ 0.65
APTX-222ENST00000478279 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
APTX-222ENST00000478279 MAPKBP1O60336 1514 aa19.08■□□□□ 0.64
APTX-222ENST00000478279 DIP2BQ9P265 1576 aa19.05■□□□□ 0.64
APTX-222ENST00000478279 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
APTX-222ENST00000478279 KDM4FA0A1W2PPD8 638 aa19.02■□□□□ 0.64
APTX-222ENST00000478279 ADCY10Q96PN6 1610 aa19.01■□□□□ 0.63
APTX-222ENST00000478279 KDM6BO15054 1643 aa18.99■□□□□ 0.63
APTX-222ENST00000478279 KIAA0586Q9BVV6 1533 aa18.95■□□□□ 0.62
APTX-222ENST00000478279 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
APTX-222ENST00000478279 IGF1RP08069 1367 aa18.89■□□□□ 0.61
APTX-222ENST00000478279 PTPRGP23470 1445 aa18.86■□□□□ 0.61
APTX-222ENST00000478279 ILDR1Q86SU0 546 aaPredicted RBP18.85■□□□□ 0.61
APTX-222ENST00000478279 CUL7Q14999 1698 aa18.83■□□□□ 0.61
APTX-222ENST00000478279 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
APTX-222ENST00000478279 TTBK1Q5TCY1 1321 aaPredicted RBP18.8■□□□□ 0.6
APTX-222ENST00000478279 ABCC2Q92887 1545 aa18.79■□□□□ 0.6
APTX-222ENST00000478279 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
APTX-222ENST00000478279 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
APTX-222ENST00000478279 CARMIL2Q6F5E8 1435 aa18.78■□□□□ 0.6
APTX-222ENST00000478279 ASXL2Q76L83 1435 aa18.78■□□□□ 0.6
APTX-222ENST00000478279 GLI2P10070 1586 aa18.77■□□□□ 0.6
APTX-222ENST00000478279 PPRC1Q5VV67 1664 aaKnown RBP18.76■□□□□ 0.59
APTX-222ENST00000478279 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
APTX-222ENST00000478279 ADGRL1O94910 1474 aa18.74■□□□□ 0.59
APTX-222ENST00000478279 UHRF1BP1LA0JNW5 1464 aa18.73■□□□□ 0.59
APTX-222ENST00000478279 UACAQ9BZF9 1416 aa18.7■□□□□ 0.58
APTX-222ENST00000478279 COL17A1Q9UMD9 1497 aaPredicted RBP18.69■□□□□ 0.58
APTX-222ENST00000478279 IQGAP2Q13576 1575 aa18.68■□□□□ 0.58
APTX-222ENST00000478279 EPRSP07814 1512 aaKnown RBP18.66■□□□□ 0.58
APTX-222ENST00000478279 DISP1Q96F81 1524 aa18.64■□□□□ 0.58
APTX-222ENST00000478279 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.58
APTX-222ENST00000478279 TEX14Q8IWB6 1497 aa18.64■□□□□ 0.57
APTX-222ENST00000478279 MAP3K4Q9Y6R4 1608 aa18.63■□□□□ 0.57
APTX-222ENST00000478279 HECW2Q9P2P5 1572 aa18.6■□□□□ 0.57
APTX-222ENST00000478279 ZCCHC11Q5TAX3 1644 aaKnown RBP18.58■□□□□ 0.56
APTX-222ENST00000478279 UGGT2Q9NYU1 1516 aa18.57■□□□□ 0.56
APTX-222ENST00000478279 WDR7Q9Y4E6 1490 aa18.52■□□□□ 0.56
APTX-222ENST00000478279 KIAA0556O60303 1618 aa18.52■□□□□ 0.55
APTX-222ENST00000478279 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.55
APTX-222ENST00000478279 MAGI3Q5TCQ9 1506 aa18.48■□□□□ 0.55
APTX-222ENST00000478279 CD109Q6YHK3 1445 aa18.48■□□□□ 0.55
APTX-222ENST00000478279 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
APTX-222ENST00000478279 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
APTX-222ENST00000478279 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
APTX-222ENST00000478279 ABCA8O94911 1581 aa18.38■□□□□ 0.53
APTX-222ENST00000478279 FBXO41Q8TF61 875 aa18.37■□□□□ 0.53
APTX-222ENST00000478279 KIF21BO75037 1637 aa18.36■□□□□ 0.53
APTX-222ENST00000478279 CTTNBP2Q8WZ74 1663 aa18.35■□□□□ 0.53
APTX-222ENST00000478279 ARAP3Q8WWN8 1544 aa18.34■□□□□ 0.53
APTX-222ENST00000478279 PHLDB1Q86UU1 1377 aa18.29■□□□□ 0.52
APTX-222ENST00000478279 PTPRMP28827 1452 aa18.27■□□□□ 0.52
APTX-222ENST00000478279 FAM9AQ8IZU1 332 aaPredicted RBP18.27■□□□□ 0.52
APTX-222ENST00000478279 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
APTX-222ENST00000478279 ATP10BO94823 1461 aa18.25■□□□□ 0.51
APTX-222ENST00000478279 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
APTX-222ENST00000478279 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
APTX-222ENST00000478279 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
APTX-222ENST00000478279 ABCA9Q8IUA7 1624 aa18.22■□□□□ 0.51
APTX-222ENST00000478279 P3H3Q8IVL6 736 aa18.2■□□□□ 0.5
APTX-222ENST00000478279 NEO1Q92859 1461 aa18.2■□□□□ 0.5
APTX-222ENST00000478279 ARID4BQ4LE39 1312 aaPredicted RBP18.18■□□□□ 0.5
APTX-222ENST00000478279 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
APTX-222ENST00000478279 PCF11O94913 1555 aaKnown RBP18.16■□□□□ 0.5
APTX-222ENST00000478279 MADDQ8WXG6 1647 aa18.15■□□□□ 0.5
APTX-222ENST00000478279 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.49
APTX-222ENST00000478279 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
APTX-222ENST00000478279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
APTX-222ENST00000478279 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
APTX-222ENST00000478279 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
APTX-222ENST00000478279 SAMD9Q5K651 1589 aa18.08■□□□□ 0.49
APTX-222ENST00000478279 RIMS1Q86UR5 1692 aaKnown RBP18.07■□□□□ 0.48
APTX-222ENST00000478279 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
APTX-222ENST00000478279 ARHGEF40Q8TER5 1519 aa18.06■□□□□ 0.48
APTX-222ENST00000478279 HSPA2P54652 639 aa18.05■□□□□ 0.48
APTX-222ENST00000478279 NUP153P49790 1475 aaKnown RBP18.04■□□□□ 0.48
APTX-222ENST00000478279 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
APTX-222ENST00000478279 AKNAQ7Z591 1439 aa18.04■□□□□ 0.48
APTX-222ENST00000478279 RICTORQ6R327 1708 aa18.03■□□□□ 0.48
APTX-222ENST00000478279 PLEKHD1A6NEE1 506 aa18.03■□□□□ 0.48
APTX-222ENST00000478279 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
APTX-222ENST00000478279 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
APTX-222ENST00000478279 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
APTX-222ENST00000478279 FANCAO15360 1455 aa18■□□□□ 0.47
APTX-222ENST00000478279 CERKQ8TCT0 537 aa17.99■□□□□ 0.47
APTX-222ENST00000478279 CFAP74Q9C0B2 1584 aa17.98■□□□□ 0.47
APTX-222ENST00000478279 ZMYM4Q5VZL5 1548 aa17.97■□□□□ 0.47
APTX-222ENST00000478279 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
APTX-222ENST00000478279 EFCAB5A4FU69 1503 aa17.95■□□□□ 0.46
APTX-222ENST00000478279 ZFYVE16Q7Z3T8 1539 aa17.95■□□□□ 0.46
APTX-222ENST00000478279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.95■□□□□ 0.46
APTX-222ENST00000478279 YEATS2Q9ULM3 1422 aa17.95■□□□□ 0.46
APTX-222ENST00000478279 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
APTX-222ENST00000478279 MLECQ14165 292 aa17.94■□□□□ 0.46
APTX-222ENST00000478279 SIGLEC1Q9BZZ2 1709 aa17.93■□□□□ 0.46
APTX-222ENST00000478279 TTC37Q6PGP7 1564 aa17.91■□□□□ 0.46
APTX-222ENST00000478279 FER1L4A9Z1Z3 1794 aa17.9■□□□□ 0.46
APTX-222ENST00000478279 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
APTX-222ENST00000478279 SCAPERQ9BY12 1400 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms