RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TSPOAP1O95153 1857 aa28.4■■■□□ 2.14
SMG5-204ENST00000476954 MAPKBP1O60336 1514 aa28.39■■■□□ 2.14
SMG5-204ENST00000476954 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
SMG5-204ENST00000476954 JPH4Q96JJ6 628 aa28.36■■■□□ 2.13
SMG5-204ENST00000476954 ADCY10Q96PN6 1610 aa28.34■■■□□ 2.13
SMG5-204ENST00000476954 NPM1P06748 294 aaKnown RBP eCLIP28.34■■■□□ 2.13
SMG5-204ENST00000476954 ERICH3Q5RHP9 1530 aa28.28■■■□□ 2.12
SMG5-204ENST00000476954 RUSC2Q8N2Y8 1516 aa28.26■■■□□ 2.11
SMG5-204ENST00000476954 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
SMG5-204ENST00000476954 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
SMG5-204ENST00000476954 ADGRL1O94910 1474 aa28.16■■■□□ 2.1
SMG5-204ENST00000476954 HECW2Q9P2P5 1572 aa28.1■■■□□ 2.09
SMG5-204ENST00000476954 PPRC1Q5VV67 1664 aaKnown RBP28.07■■■□□ 2.08
SMG5-204ENST00000476954 COL17A1Q9UMD9 1497 aaPredicted RBP27.95■■■□□ 2.07
SMG5-204ENST00000476954 TTBK1Q5TCY1 1321 aaPredicted RBP27.95■■■□□ 2.07
SMG5-204ENST00000476954 KIAA0586Q9BVV6 1533 aa27.95■■■□□ 2.06
SMG5-204ENST00000476954 GLI2P10070 1586 aa27.9■■■□□ 2.06
SMG5-204ENST00000476954 ASXL2Q76L83 1435 aa27.9■■■□□ 2.06
SMG5-204ENST00000476954 PTPRGP23470 1445 aa27.89■■■□□ 2.06
SMG5-204ENST00000476954 ABCC2Q92887 1545 aa27.87■■■□□ 2.05
SMG5-204ENST00000476954 CUL7Q14999 1698 aa27.85■■■□□ 2.05
SMG5-204ENST00000476954 PLB1Q6P1J6 1458 aa27.83■■■□□ 2.04
SMG5-204ENST00000476954 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
SMG5-204ENST00000476954 MAP3K4Q9Y6R4 1608 aa27.77■■■□□ 2.04
SMG5-204ENST00000476954 IGF1RP08069 1367 aa27.75■■■□□ 2.03
SMG5-204ENST00000476954 TNIKQ9UKE5 1360 aa27.74■■■□□ 2.03
SMG5-204ENST00000476954 FBXO41Q8TF61 875 aa27.73■■■□□ 2.03
SMG5-204ENST00000476954 EPRSP07814 1512 aaKnown RBP27.72■■■□□ 2.03
SMG5-204ENST00000476954 UHRF1BP1LA0JNW5 1464 aa27.69■■■□□ 2.02
SMG5-204ENST00000476954 CARMIL2Q6F5E8 1435 aa27.67■■■□□ 2.02
SMG5-204ENST00000476954 TEX14Q8IWB6 1497 aa27.65■■■□□ 2.02
SMG5-204ENST00000476954 UACAQ9BZF9 1416 aa27.65■■■□□ 2.02
SMG5-204ENST00000476954 ZCCHC11Q5TAX3 1644 aaKnown RBP27.6■■■□□ 2.01
SMG5-204ENST00000476954 KDM5BQ9UGL1 1544 aa27.6■■■□□ 2.01
SMG5-204ENST00000476954 KIF27Q86VH2 1401 aa27.58■■■□□ 2.01
SMG5-204ENST00000476954 IQGAP2Q13576 1575 aa27.57■■■□□ 2
SMG5-204ENST00000476954 DISP1Q96F81 1524 aa27.56■■■□□ 2
SMG5-204ENST00000476954 KIF21BO75037 1637 aa27.52■■■□□ 2
SMG5-204ENST00000476954 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
SMG5-204ENST00000476954 WDR7Q9Y4E6 1490 aa27.44■■□□□ 1.98
SMG5-204ENST00000476954 MAGI3Q5TCQ9 1506 aa27.38■■□□□ 1.97
SMG5-204ENST00000476954 CD109Q6YHK3 1445 aa27.38■■□□□ 1.97
SMG5-204ENST00000476954 CFAP43Q8NDM7 1665 aa27.37■■□□□ 1.97
SMG5-204ENST00000476954 KIAA0556O60303 1618 aa27.36■■□□□ 1.97
SMG5-204ENST00000476954 UGGT2Q9NYU1 1516 aa27.35■■□□□ 1.97
SMG5-204ENST00000476954 KCNH8Q96L42 1107 aa27.34■■□□□ 1.97
SMG5-204ENST00000476954 PTPRMP28827 1452 aa27.33■■□□□ 1.97
SMG5-204ENST00000476954 ADAMTSL3P82987 1691 aa27.3■■□□□ 1.96
SMG5-204ENST00000476954 LMTK3Q96Q04 1460 aa27.3■■□□□ 1.96
SMG5-204ENST00000476954 PCF11O94913 1555 aaKnown RBP27.22■■□□□ 1.95
SMG5-204ENST00000476954 ARAP3Q8WWN8 1544 aa27.21■■□□□ 1.95
SMG5-204ENST00000476954 ABCA8O94911 1581 aa27.18■■□□□ 1.94
SMG5-204ENST00000476954 MADDQ8WXG6 1647 aa27.17■■□□□ 1.94
SMG5-204ENST00000476954 RAPGEF2Q9Y4G8 1499 aa27.15■■□□□ 1.94
SMG5-204ENST00000476954 BCORL1Q5H9F3 1711 aa27.14■■□□□ 1.94
SMG5-204ENST00000476954 ILDR2Q71H61 639 aa27.12■■□□□ 1.93
SMG5-204ENST00000476954 RAPGEF3O95398 923 aa27.09■■□□□ 1.93
SMG5-204ENST00000476954 HSPA2P54652 639 aa27.08■■□□□ 1.93
SMG5-204ENST00000476954 ARID3CA6NKF2 412 aa27.07■■□□□ 1.92
SMG5-204ENST00000476954 RIMS1Q86UR5 1692 aaKnown RBP27.05■■□□□ 1.92
SMG5-204ENST00000476954 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
SMG5-204ENST00000476954 ARID4BQ4LE39 1312 aaPredicted RBP27.04■■□□□ 1.92
SMG5-204ENST00000476954 FRMPD1Q5SYB0 1578 aa27.02■■□□□ 1.92
SMG5-204ENST00000476954 CERKQ8TCT0 537 aa27.02■■□□□ 1.92
SMG5-204ENST00000476954 SOCS7O14512 581 aa27■■□□□ 1.91
SMG5-204ENST00000476954 DISP3Q9P2K9 1392 aa26.99■■□□□ 1.91
SMG5-204ENST00000476954 ABCA9Q8IUA7 1624 aa26.99■■□□□ 1.91
SMG5-204ENST00000476954 PLPPR3Q6T4P5 718 aa26.98■■□□□ 1.91
SMG5-204ENST00000476954 GOLGA3Q08378 1498 aa26.98■■□□□ 1.91
SMG5-204ENST00000476954 ATP10BO94823 1461 aa26.94■■□□□ 1.9
SMG5-204ENST00000476954 PHLDB1Q86UU1 1377 aa26.94■■□□□ 1.9
SMG5-204ENST00000476954 NEO1Q92859 1461 aa26.9■■□□□ 1.9
SMG5-204ENST00000476954 ARHGEF40Q8TER5 1519 aa26.87■■□□□ 1.89
SMG5-204ENST00000476954 SIGLEC1Q9BZZ2 1709 aa26.85■■□□□ 1.89
SMG5-204ENST00000476954 P3H3Q8IVL6 736 aa26.83■■□□□ 1.89
SMG5-204ENST00000476954 RICTORQ6R327 1708 aa26.8■■□□□ 1.88
SMG5-204ENST00000476954 SPATA31D1Q6ZQQ2 1576 aa26.75■■□□□ 1.87
SMG5-204ENST00000476954 DENND4BO75064 1496 aaPredicted RBP26.74■■□□□ 1.87
SMG5-204ENST00000476954 MLECQ14165 292 aa26.72■■□□□ 1.87
SMG5-204ENST00000476954 FER1L4A9Z1Z3 1794 aa26.71■■□□□ 1.87
SMG5-204ENST00000476954 FANCAO15360 1455 aa26.71■■□□□ 1.87
SMG5-204ENST00000476954 YEATS2Q9ULM3 1422 aa26.7■■□□□ 1.86
SMG5-204ENST00000476954 RAPGEF6Q8TEU7 1601 aa26.69■■□□□ 1.86
SMG5-204ENST00000476954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.69■■□□□ 1.86
SMG5-204ENST00000476954 HNRNPUL2Q1KMD3 747 aaKnown RBP26.69■■□□□ 1.86
SMG5-204ENST00000476954 POGZQ7Z3K3 1410 aa26.69■■□□□ 1.86
SMG5-204ENST00000476954 FHOD3Q2V2M9 1422 aa26.68■■□□□ 1.86
SMG5-204ENST00000476954 TTC37Q6PGP7 1564 aa26.67■■□□□ 1.86
SMG5-204ENST00000476954 AKNAQ7Z591 1439 aa26.67■■□□□ 1.86
SMG5-204ENST00000476954 STRCQ7RTU9 1775 aa26.66■■□□□ 1.86
SMG5-204ENST00000476954 ZFYVE16Q7Z3T8 1539 aa26.65■■□□□ 1.86
SMG5-204ENST00000476954 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
SMG5-204ENST00000476954 FAM9AQ8IZU1 332 aaPredicted RBP26.64■■□□□ 1.86
SMG5-204ENST00000476954 ZMYM4Q5VZL5 1548 aa26.64■■□□□ 1.85
SMG5-204ENST00000476954 PREX1Q8TCU6 1659 aa26.63■■□□□ 1.85
SMG5-204ENST00000476954 NUP153P49790 1475 aaKnown RBP26.6■■□□□ 1.85
SMG5-204ENST00000476954 EFCAB5A4FU69 1503 aa26.6■■□□□ 1.85
SMG5-204ENST00000476954 SAMD9Q5K651 1589 aa26.59■■□□□ 1.85
SMG5-204ENST00000476954 CEBPAP49715 358 aaPredicted RBP26.59■■□□□ 1.85
SMG5-204ENST00000476954 HECW1Q76N89 1606 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms