RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 FHAD1B1AJZ9 1412 aa35.64■■■■□ 3.3
CCDC7-206ENST00000476558 ADAMTS12P58397 1594 aa35.62■■■■□ 3.29
CCDC7-206ENST00000476558 APLP2Q06481 763 aa35.6■■■■□ 3.29
CCDC7-206ENST00000476558 TTBK1Q5TCY1 1321 aaPredicted RBP35.58■■■■□ 3.29
CCDC7-206ENST00000476558 EFCAB5A4FU69 1503 aa35.57■■■■□ 3.28
CCDC7-206ENST00000476558 EIF4G3O43432 1585 aaKnown RBP35.54■■■■□ 3.28
CCDC7-206ENST00000476558 SAMD9Q5K651 1589 aa35.42■■■■□ 3.26
CCDC7-206ENST00000476558 MAP3K1Q13233 1512 aa35.4■■■■□ 3.26
CCDC7-206ENST00000476558 SNAPC4Q5SXM2 1469 aa35.39■■■■□ 3.26
CCDC7-206ENST00000476558 FHOD3Q2V2M9 1422 aa35.38■■■■□ 3.25
CCDC7-206ENST00000476558 KANK4Q5T7N3 995 aaPredicted RBP35.36■■■■□ 3.25
CCDC7-206ENST00000476558 P3H3Q8IVL6 736 aa35.34■■■■□ 3.25
CCDC7-206ENST00000476558 MAGI1Q96QZ7 1491 aaPredicted RBP35.33■■■■□ 3.25
CCDC7-206ENST00000476558 PCF11O94913 1555 aaKnown RBP35.3■■■■□ 3.24
CCDC7-206ENST00000476558 TIAM1Q13009 1591 aa35.29■■■■□ 3.24
CCDC7-206ENST00000476558 IQGAP2Q13576 1575 aa35.29■■■■□ 3.24
CCDC7-206ENST00000476558 GRIN2AQ12879 1464 aa35.26■■■■□ 3.24
CCDC7-206ENST00000476558 FYCO1Q9BQS8 1478 aa35.25■■■■□ 3.23
CCDC7-206ENST00000476558 FMN1Q68DA7 1419 aa35.25■■■■□ 3.23
CCDC7-206ENST00000476558 CASKIN1Q8WXD9 1431 aa35.25■■■■□ 3.23
CCDC7-206ENST00000476558 SYNJ2O15056 1496 aa35.2■■■■□ 3.23
CCDC7-206ENST00000476558 CFAP43Q8NDM7 1665 aa35.19■■■■□ 3.22
CCDC7-206ENST00000476558 KIAA0586Q9BVV6 1533 aa35.18■■■■□ 3.22
CCDC7-206ENST00000476558 UGGT2Q9NYU1 1516 aa35.16■■■■□ 3.22
CCDC7-206ENST00000476558 LRRC9Q6ZRR7 1453 aa35.13■■■■□ 3.21
CCDC7-206ENST00000476558 RRBP1Q9P2E9 1410 aaKnown RBP35.07■■■■□ 3.21
CCDC7-206ENST00000476558 ZEB1P37275 1124 aaPredicted RBP35.06■■■■□ 3.2
CCDC7-206ENST00000476558 CHMP7Q8WUX9 453 aaPredicted RBP35.06■■■■□ 3.2
CCDC7-206ENST00000476558 CEP170Q5SW79 1584 aa35.04■■■■□ 3.2
CCDC7-206ENST00000476558 NUP160Q12769 1436 aa35.01■■■■□ 3.19
CCDC7-206ENST00000476558 LRRIQ1Q96JM4 1722 aa34.98■■■■□ 3.19
CCDC7-206ENST00000476558 DISP1Q96F81 1524 aa34.97■■■■□ 3.19
CCDC7-206ENST00000476558 ATP1B4Q9UN42 357 aaPredicted RBP34.96■■■■□ 3.19
CCDC7-206ENST00000476558 KIAA0556O60303 1618 aa34.94■■■■□ 3.18
CCDC7-206ENST00000476558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.94■■■■□ 3.18
CCDC7-206ENST00000476558 HNRNPUL2Q1KMD3 747 aaKnown RBP34.92■■■■□ 3.18
CCDC7-206ENST00000476558 CCNB3Q8WWL7 1395 aa34.89■■■■□ 3.18
CCDC7-206ENST00000476558 FBLN2P98095 1184 aa34.88■■■■□ 3.17
CCDC7-206ENST00000476558 PHLDB1Q86UU1 1377 aa34.85■■■■□ 3.17
CCDC7-206ENST00000476558 HECW1Q76N89 1606 aa34.83■■■■□ 3.17
CCDC7-206ENST00000476558 CCER1Q8TC90 406 aaPredicted RBP34.82■■■■□ 3.16
CCDC7-206ENST00000476558 CCDC18Q5T9S5 1454 aa34.8■■■■□ 3.16
CCDC7-206ENST00000476558 JPH4Q96JJ6 628 aa34.74■■■■□ 3.15
CCDC7-206ENST00000476558 EPRSP07814 1512 aaKnown RBP34.73■■■■□ 3.15
CCDC7-206ENST00000476558 MTUS2Q5JR59 1369 aa34.72■■■■□ 3.15
CCDC7-206ENST00000476558 CHD1O14646 1710 aa34.71■■■■□ 3.15
CCDC7-206ENST00000476558 EHBP1L1Q8N3D4 1523 aa34.7■■■■□ 3.14
CCDC7-206ENST00000476558 MAGI3Q5TCQ9 1506 aa34.67■■■■□ 3.14
CCDC7-206ENST00000476558 CARMIL2Q6F5E8 1435 aa34.67■■■■□ 3.14
CCDC7-206ENST00000476558 RAPGEF6Q8TEU7 1601 aa34.64■■■■□ 3.14
CCDC7-206ENST00000476558 SUPT6HQ7KZ85 1726 aaKnown RBP34.62■■■■□ 3.13
CCDC7-206ENST00000476558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.62■■■■□ 3.13
CCDC7-206ENST00000476558 ARHGEF11O15085 1522 aa34.61■■■■□ 3.13
CCDC7-206ENST00000476558 NUP153P49790 1475 aaKnown RBP34.6■■■■□ 3.13
CCDC7-206ENST00000476558 NCOA2Q15596 1464 aa34.6■■■■□ 3.13
CCDC7-206ENST00000476558 CDK13Q14004 1512 aaKnown RBP34.6■■■■□ 3.13
CCDC7-206ENST00000476558 FGD6Q6ZV73 1430 aa34.56■■■■□ 3.12
CCDC7-206ENST00000476558 MYOM3Q5VTT5 1437 aa34.5■■■■□ 3.11
CCDC7-206ENST00000476558 SHROOM2Q13796 1616 aa34.49■■■■□ 3.11
CCDC7-206ENST00000476558 PLB1Q6P1J6 1458 aa34.49■■■■□ 3.11
CCDC7-206ENST00000476558 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
CCDC7-206ENST00000476558 FAM50AQ14320 339 aaKnown RBP34.46■■■■□ 3.11
CCDC7-206ENST00000476558 ITGAEP38570 1179 aa34.44■■■■□ 3.1
CCDC7-206ENST00000476558 ABCA8O94911 1581 aa34.43■■■■□ 3.1
CCDC7-206ENST00000476558 ARID3CA6NKF2 412 aa34.38■■■■□ 3.09
CCDC7-206ENST00000476558 DHX57Q6P158 1386 aaKnown RBP34.35■■■■□ 3.09
CCDC7-206ENST00000476558 CLASP1Q7Z460 1538 aa34.33■■■■□ 3.09
CCDC7-206ENST00000476558 PTPN23Q9H3S7 1636 aa34.33■■■■□ 3.09
CCDC7-206ENST00000476558 CDK11AQ9UQ88 783 aaPredicted RBP34.32■■■■□ 3.09
CCDC7-206ENST00000476558 TCOF1Q13428 1488 aaKnown RBP34.31■■■■□ 3.08
CCDC7-206ENST00000476558 SETD5Q9C0A6 1442 aa34.31■■■■□ 3.08
CCDC7-206ENST00000476558 PTPRGP23470 1445 aa34.3■■■■□ 3.08
CCDC7-206ENST00000476558 CLSPNQ9HAW4 1339 aa34.29■■■■□ 3.08
CCDC7-206ENST00000476558 RAB3GAP2Q9H2M9 1393 aa34.29■■■■□ 3.08
CCDC7-206ENST00000476558 MIA2Q96PC5 1412 aa34.29■■■■□ 3.08
CCDC7-206ENST00000476558 TROQ12816 1431 aaPredicted RBP34.27■■■■□ 3.08
CCDC7-206ENST00000476558 PTPRKQ15262 1439 aa34.23■■■■□ 3.07
CCDC7-206ENST00000476558 ATP10BO94823 1461 aa34.22■■■■□ 3.07
CCDC7-206ENST00000476558 ADCY10Q96PN6 1610 aa34.22■■■■□ 3.07
CCDC7-206ENST00000476558 ERCC6L2Q5T890 1561 aa34.2■■■■□ 3.07
CCDC7-206ENST00000476558 UACAQ9BZF9 1416 aa34.12■■■■□ 3.05
CCDC7-206ENST00000476558 HFM1A2PYH4 1435 aa34.11■■■■□ 3.05
CCDC7-206ENST00000476558 KIF14Q15058 1648 aa34.11■■■■□ 3.05
CCDC7-206ENST00000476558 PLEKHD1A6NEE1 506 aa34.06■■■■□ 3.04
CCDC7-206ENST00000476558 GPATCH8Q9UKJ3 1502 aaKnown RBP34.04■■■■□ 3.04
CCDC7-206ENST00000476558 ITSN2Q9NZM3 1697 aa34.03■■■■□ 3.04
CCDC7-206ENST00000476558 NAIPQ13075 1403 aa34.02■■■■□ 3.04
CCDC7-206ENST00000476558 ABCC2Q92887 1545 aa34.01■■■■□ 3.04
CCDC7-206ENST00000476558 ABCC10Q5T3U5 1492 aa34.01■■■■□ 3.03
CCDC7-206ENST00000476558 MAPKBP1O60336 1514 aa33.99■■■■□ 3.03
CCDC7-206ENST00000476558 AKNAQ7Z591 1439 aa33.98■■■■□ 3.03
CCDC7-206ENST00000476558 DNMT1P26358 1616 aaKnown RBP33.96■■■■□ 3.03
CCDC7-206ENST00000476558 UHRF1BP1LA0JNW5 1464 aa33.93■■■■□ 3.02
CCDC7-206ENST00000476558 ZNF644Q9H582 1327 aaPredicted RBP33.92■■■■□ 3.02
CCDC7-206ENST00000476558 CDC42BPAQ5VT25 1732 aa33.92■■■■□ 3.02
CCDC7-206ENST00000476558 GCC2Q8IWJ2 1684 aa33.92■■■■□ 3.02
CCDC7-206ENST00000476558 DAPK1P53355 1430 aa33.92■■■■□ 3.02
CCDC7-206ENST00000476558 ABCC5O15440 1437 aa33.9■■■■□ 3.02
CCDC7-206ENST00000476558 CFDP1Q9UEE9 299 aaPredicted RBP33.9■■■■□ 3.02
CCDC7-206ENST00000476558 CAMSAP2Q08AD1 1489 aa33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms