RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 DIP2BQ9P265 1576 aa18.75■□□□□ 0.59
CCHCR1-212ENST00000475684 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-212ENST00000475684 MAPKBP1O60336 1514 aa18.73■□□□□ 0.59
CCHCR1-212ENST00000475684 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
CCHCR1-212ENST00000475684 HECW2Q9P2P5 1572 aa18.68■□□□□ 0.58
CCHCR1-212ENST00000475684 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
CCHCR1-212ENST00000475684 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
CCHCR1-212ENST00000475684 TSPOAP1O95153 1857 aa18.67■□□□□ 0.58
CCHCR1-212ENST00000475684 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
CCHCR1-212ENST00000475684 FBXO41Q8TF61 875 aa18.62■□□□□ 0.57
CCHCR1-212ENST00000475684 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
CCHCR1-212ENST00000475684 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
CCHCR1-212ENST00000475684 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
CCHCR1-212ENST00000475684 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
CCHCR1-212ENST00000475684 PPRC1Q5VV67 1664 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-212ENST00000475684 COL17A1Q9UMD9 1497 aaPredicted RBP18.4■□□□□ 0.54
CCHCR1-212ENST00000475684 TTBK1Q5TCY1 1321 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-212ENST00000475684 LMTK3Q96Q04 1460 aa18.38■□□□□ 0.53
CCHCR1-212ENST00000475684 GLI2P10070 1586 aa18.38■□□□□ 0.53
CCHCR1-212ENST00000475684 ASXL2Q76L83 1435 aa18.36■□□□□ 0.53
CCHCR1-212ENST00000475684 PLB1Q6P1J6 1458 aa18.35■□□□□ 0.53
CCHCR1-212ENST00000475684 PTPRGP23470 1445 aa18.35■□□□□ 0.53
CCHCR1-212ENST00000475684 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
CCHCR1-212ENST00000475684 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
CCHCR1-212ENST00000475684 ABCC2Q92887 1545 aa18.32■□□□□ 0.52
CCHCR1-212ENST00000475684 KIAA0586Q9BVV6 1533 aa18.32■□□□□ 0.52
CCHCR1-212ENST00000475684 TEX14Q8IWB6 1497 aa18.28■□□□□ 0.52
CCHCR1-212ENST00000475684 MAP3K4Q9Y6R4 1608 aa18.25■□□□□ 0.51
CCHCR1-212ENST00000475684 CUL7Q14999 1698 aa18.24■□□□□ 0.51
CCHCR1-212ENST00000475684 EPRSP07814 1512 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-212ENST00000475684 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
CCHCR1-212ENST00000475684 SOCS7O14512 581 aa18.22■□□□□ 0.51
CCHCR1-212ENST00000475684 CARMIL2Q6F5E8 1435 aa18.19■□□□□ 0.5
CCHCR1-212ENST00000475684 UHRF1BP1LA0JNW5 1464 aa18.19■□□□□ 0.5
CCHCR1-212ENST00000475684 ILDR2Q71H61 639 aa18.18■□□□□ 0.5
CCHCR1-212ENST00000475684 UACAQ9BZF9 1416 aa18.16■□□□□ 0.5
CCHCR1-212ENST00000475684 DISP3Q9P2K9 1392 aa18.14■□□□□ 0.49
CCHCR1-212ENST00000475684 IGF1RP08069 1367 aa18.11■□□□□ 0.49
CCHCR1-212ENST00000475684 KDM5BQ9UGL1 1544 aa18.11■□□□□ 0.49
CCHCR1-212ENST00000475684 KIF21BO75037 1637 aa18.11■□□□□ 0.49
CCHCR1-212ENST00000475684 PTPRMP28827 1452 aa18.09■□□□□ 0.49
CCHCR1-212ENST00000475684 ZCCHC11Q5TAX3 1644 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-212ENST00000475684 CD109Q6YHK3 1445 aa18.05■□□□□ 0.48
CCHCR1-212ENST00000475684 CERKQ8TCT0 537 aa18.04■□□□□ 0.48
CCHCR1-212ENST00000475684 WDR7Q9Y4E6 1490 aa18.03■□□□□ 0.48
CCHCR1-212ENST00000475684 PCF11O94913 1555 aaKnown RBP18.03■□□□□ 0.48
CCHCR1-212ENST00000475684 MAGI3Q5TCQ9 1506 aa18.03■□□□□ 0.48
CCHCR1-212ENST00000475684 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
CCHCR1-212ENST00000475684 IQGAP2Q13576 1575 aa18■□□□□ 0.47
CCHCR1-212ENST00000475684 ADAMTSL3P82987 1691 aa18■□□□□ 0.47
CCHCR1-212ENST00000475684 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
CCHCR1-212ENST00000475684 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
CCHCR1-212ENST00000475684 CFAP43Q8NDM7 1665 aa17.97■□□□□ 0.47
CCHCR1-212ENST00000475684 CARMIL1Q5VZK9 1371 aa17.97■□□□□ 0.47
CCHCR1-212ENST00000475684 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
CCHCR1-212ENST00000475684 HSPA2P54652 639 aa17.95■□□□□ 0.46
CCHCR1-212ENST00000475684 ARID4BQ4LE39 1312 aaPredicted RBP17.92■□□□□ 0.46
CCHCR1-212ENST00000475684 ARAP3Q8WWN8 1544 aa17.92■□□□□ 0.46
CCHCR1-212ENST00000475684 MADDQ8WXG6 1647 aa17.89■□□□□ 0.45
CCHCR1-212ENST00000475684 FOXD1Q16676 465 aa17.88■□□□□ 0.45
CCHCR1-212ENST00000475684 BCORL1Q5H9F3 1711 aa17.87■□□□□ 0.45
CCHCR1-212ENST00000475684 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
CCHCR1-212ENST00000475684 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
CCHCR1-212ENST00000475684 RAPGEF3O95398 923 aa17.85■□□□□ 0.45
CCHCR1-212ENST00000475684 UGGT2Q9NYU1 1516 aa17.85■□□□□ 0.45
CCHCR1-212ENST00000475684 KIAA0556O60303 1618 aa17.84■□□□□ 0.45
CCHCR1-212ENST00000475684 RIMS1Q86UR5 1692 aaKnown RBP17.81■□□□□ 0.44
CCHCR1-212ENST00000475684 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
CCHCR1-212ENST00000475684 ABCA8O94911 1581 aa17.74■□□□□ 0.43
CCHCR1-212ENST00000475684 ARID3CA6NKF2 412 aa17.71■□□□□ 0.43
CCHCR1-212ENST00000475684 NEO1Q92859 1461 aa17.69■□□□□ 0.42
CCHCR1-212ENST00000475684 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
CCHCR1-212ENST00000475684 DMRT2Q9Y5R5 561 aa17.69■□□□□ 0.42
CCHCR1-212ENST00000475684 FRMPD1Q5SYB0 1578 aa17.69■□□□□ 0.42
CCHCR1-212ENST00000475684 ABCA9Q8IUA7 1624 aa17.68■□□□□ 0.42
CCHCR1-212ENST00000475684 POGZQ7Z3K3 1410 aa17.67■□□□□ 0.42
CCHCR1-212ENST00000475684 GOLGA3Q08378 1498 aa17.67■□□□□ 0.42
CCHCR1-212ENST00000475684 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.42
CCHCR1-212ENST00000475684 ARHGEF40Q8TER5 1519 aa17.64■□□□□ 0.41
CCHCR1-212ENST00000475684 MLECQ14165 292 aa17.63■□□□□ 0.41
CCHCR1-212ENST00000475684 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-212ENST00000475684 FANCAO15360 1455 aa17.63■□□□□ 0.41
CCHCR1-212ENST00000475684 ATP10BO94823 1461 aa17.63■□□□□ 0.41
CCHCR1-212ENST00000475684 AKNAQ7Z591 1439 aa17.6■□□□□ 0.41
CCHCR1-212ENST00000475684 DENND4BO75064 1496 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-212ENST00000475684 STRCQ7RTU9 1775 aa17.57■□□□□ 0.4
CCHCR1-212ENST00000475684 PREX1Q8TCU6 1659 aa17.57■□□□□ 0.4
CCHCR1-212ENST00000475684 CTTNBP2Q8WZ74 1663 aa17.56■□□□□ 0.4
CCHCR1-212ENST00000475684 TTC37Q6PGP7 1564 aa17.56■□□□□ 0.4
CCHCR1-212ENST00000475684 FER1L4A9Z1Z3 1794 aa17.56■□□□□ 0.4
CCHCR1-212ENST00000475684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-212ENST00000475684 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-212ENST00000475684 CEBPAP49715 358 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-212ENST00000475684 RICTORQ6R327 1708 aa17.54■□□□□ 0.4
CCHCR1-212ENST00000475684 SIGLEC1Q9BZZ2 1709 aa17.54■□□□□ 0.4
CCHCR1-212ENST00000475684 FHOD3Q2V2M9 1422 aa17.54■□□□□ 0.4
CCHCR1-212ENST00000475684 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
CCHCR1-212ENST00000475684 ZFYVE16Q7Z3T8 1539 aa17.52■□□□□ 0.39
CCHCR1-212ENST00000475684 PTPRTO14522 1441 aa17.5■□□□□ 0.39
CCHCR1-212ENST00000475684 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms