RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
LSAMP-204ENST00000475403 MAPKBP1O60336 1514 aa12.33□□□□□ -0.44
LSAMP-204ENST00000475403 WRNQ14191 1432 aaPredicted RBP eCLIP12.33□□□□□ -0.44
LSAMP-204ENST00000475403 TSPOAP1O95153 1857 aa12.33□□□□□ -0.44
LSAMP-204ENST00000475403 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
LSAMP-204ENST00000475403 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
LSAMP-204ENST00000475403 ADCY10Q96PN6 1610 aa12.27□□□□□ -0.44
LSAMP-204ENST00000475403 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
LSAMP-204ENST00000475403 ADGRL1O94910 1474 aa12.24□□□□□ -0.45
LSAMP-204ENST00000475403 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
LSAMP-204ENST00000475403 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
LSAMP-204ENST00000475403 HECW2Q9P2P5 1572 aa12.22□□□□□ -0.45
LSAMP-204ENST00000475403 TTBK1Q5TCY1 1321 aaPredicted RBP12.16□□□□□ -0.46
LSAMP-204ENST00000475403 PTPRGP23470 1445 aa12.11□□□□□ -0.47
LSAMP-204ENST00000475403 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
LSAMP-204ENST00000475403 KIAA0586Q9BVV6 1533 aa12.11□□□□□ -0.47
LSAMP-204ENST00000475403 PPRC1Q5VV67 1664 aaKnown RBP12.11□□□□□ -0.47
LSAMP-204ENST00000475403 PLB1Q6P1J6 1458 aa12.11□□□□□ -0.47
LSAMP-204ENST00000475403 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
LSAMP-204ENST00000475403 GLI2P10070 1586 aa12.1□□□□□ -0.47
LSAMP-204ENST00000475403 TEX14Q8IWB6 1497 aa12.08□□□□□ -0.47
LSAMP-204ENST00000475403 CUL7Q14999 1698 aa12.08□□□□□ -0.48
LSAMP-204ENST00000475403 CARMIL2Q6F5E8 1435 aa12.07□□□□□ -0.48
LSAMP-204ENST00000475403 FBXO41Q8TF61 875 aa12.07□□□□□ -0.48
LSAMP-204ENST00000475403 TNIKQ9UKE5 1360 aa12.05□□□□□ -0.48
LSAMP-204ENST00000475403 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
LSAMP-204ENST00000475403 MAP3K4Q9Y6R4 1608 aa12.04□□□□□ -0.48
LSAMP-204ENST00000475403 COL17A1Q9UMD9 1497 aaPredicted RBP12.03□□□□□ -0.48
LSAMP-204ENST00000475403 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.48
LSAMP-204ENST00000475403 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
LSAMP-204ENST00000475403 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
LSAMP-204ENST00000475403 KIF27Q86VH2 1401 aa12□□□□□ -0.49
LSAMP-204ENST00000475403 IQGAP2Q13576 1575 aa11.98□□□□□ -0.49
LSAMP-204ENST00000475403 IGF1RP08069 1367 aa11.98□□□□□ -0.49
LSAMP-204ENST00000475403 ZCCHC11Q5TAX3 1644 aaKnown RBP11.97□□□□□ -0.49
LSAMP-204ENST00000475403 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.5
LSAMP-204ENST00000475403 KIF21BO75037 1637 aa11.94□□□□□ -0.5
LSAMP-204ENST00000475403 WDR7Q9Y4E6 1490 aa11.94□□□□□ -0.5
LSAMP-204ENST00000475403 CARMIL1Q5VZK9 1371 aa11.93□□□□□ -0.5
LSAMP-204ENST00000475403 LMTK3Q96Q04 1460 aa11.93□□□□□ -0.5
LSAMP-204ENST00000475403 CD109Q6YHK3 1445 aa11.9□□□□□ -0.5
LSAMP-204ENST00000475403 CFAP43Q8NDM7 1665 aa11.9□□□□□ -0.5
LSAMP-204ENST00000475403 DISP1Q96F81 1524 aa11.9□□□□□ -0.5
LSAMP-204ENST00000475403 MAGI3Q5TCQ9 1506 aa11.88□□□□□ -0.51
LSAMP-204ENST00000475403 KIAA0556O60303 1618 aa11.87□□□□□ -0.51
LSAMP-204ENST00000475403 KCNH8Q96L42 1107 aa11.87□□□□□ -0.51
LSAMP-204ENST00000475403 PTPRMP28827 1452 aa11.87□□□□□ -0.51
LSAMP-204ENST00000475403 PCF11O94913 1555 aaKnown RBP11.85□□□□□ -0.51
LSAMP-204ENST00000475403 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
LSAMP-204ENST00000475403 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
LSAMP-204ENST00000475403 ADAMTSL3P82987 1691 aa11.81□□□□□ -0.52
LSAMP-204ENST00000475403 CHIC1Q5VXU3 224 aa11.8□□□□□ -0.52
LSAMP-204ENST00000475403 ARAP3Q8WWN8 1544 aa11.8□□□□□ -0.52
LSAMP-204ENST00000475403 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
LSAMP-204ENST00000475403 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
LSAMP-204ENST00000475403 MADDQ8WXG6 1647 aa11.78□□□□□ -0.52
LSAMP-204ENST00000475403 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.52
LSAMP-204ENST00000475403 GOLGA3Q08378 1498 aa11.77□□□□□ -0.52
LSAMP-204ENST00000475403 SOCS7O14512 581 aa11.76□□□□□ -0.53
LSAMP-204ENST00000475403 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
LSAMP-204ENST00000475403 FAM9AQ8IZU1 332 aaPredicted RBP11.76□□□□□ -0.53
LSAMP-204ENST00000475403 ABCA8O94911 1581 aa11.75□□□□□ -0.53
LSAMP-204ENST00000475403 RIMS1Q86UR5 1692 aaKnown RBP11.75□□□□□ -0.53
LSAMP-204ENST00000475403 PHLDB1Q86UU1 1377 aa11.75□□□□□ -0.53
LSAMP-204ENST00000475403 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
LSAMP-204ENST00000475403 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
LSAMP-204ENST00000475403 CERKQ8TCT0 537 aa11.74□□□□□ -0.53
LSAMP-204ENST00000475403 RAPGEF3O95398 923 aa11.73□□□□□ -0.53
LSAMP-204ENST00000475403 HSPA2P54652 639 aa11.73□□□□□ -0.53
LSAMP-204ENST00000475403 ILDR2Q71H61 639 aa11.71□□□□□ -0.53
LSAMP-204ENST00000475403 ABCA9Q8IUA7 1624 aa11.71□□□□□ -0.54
LSAMP-204ENST00000475403 ARHGEF40Q8TER5 1519 aa11.7□□□□□ -0.54
LSAMP-204ENST00000475403 NEO1Q92859 1461 aa11.7□□□□□ -0.54
LSAMP-204ENST00000475403 SPATA31D1Q6ZQQ2 1576 aa11.69□□□□□ -0.54
LSAMP-204ENST00000475403 POGZQ7Z3K3 1410 aa11.69□□□□□ -0.54
LSAMP-204ENST00000475403 FRMPD1Q5SYB0 1578 aa11.67□□□□□ -0.54
LSAMP-204ENST00000475403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.67□□□□□ -0.54
LSAMP-204ENST00000475403 HNRNPUL2Q1KMD3 747 aaKnown RBP11.67□□□□□ -0.54
LSAMP-204ENST00000475403 FANCAO15360 1455 aa11.67□□□□□ -0.54
LSAMP-204ENST00000475403 ATP10BO94823 1461 aa11.64□□□□□ -0.55
LSAMP-204ENST00000475403 AKNAQ7Z591 1439 aa11.64□□□□□ -0.55
LSAMP-204ENST00000475403 FER1L4A9Z1Z3 1794 aa11.63□□□□□ -0.55
LSAMP-204ENST00000475403 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
LSAMP-204ENST00000475403 MLECQ14165 292 aa11.62□□□□□ -0.55
LSAMP-204ENST00000475403 CFAP74Q9C0B2 1584 aa11.62□□□□□ -0.55
LSAMP-204ENST00000475403 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
LSAMP-204ENST00000475403 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
LSAMP-204ENST00000475403 ZFYVE16Q7Z3T8 1539 aa11.6□□□□□ -0.55
LSAMP-204ENST00000475403 RICTORQ6R327 1708 aa11.6□□□□□ -0.55
LSAMP-204ENST00000475403 PREX1Q8TCU6 1659 aa11.59□□□□□ -0.55
LSAMP-204ENST00000475403 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
LSAMP-204ENST00000475403 RAPGEF6Q8TEU7 1601 aa11.59□□□□□ -0.55
LSAMP-204ENST00000475403 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.55
LSAMP-204ENST00000475403 FHOD3Q2V2M9 1422 aa11.57□□□□□ -0.56
LSAMP-204ENST00000475403 YEATS2Q9ULM3 1422 aa11.57□□□□□ -0.56
LSAMP-204ENST00000475403 ZMYM4Q5VZL5 1548 aa11.56□□□□□ -0.56
LSAMP-204ENST00000475403 UHRF1BP1Q6BDS2 1440 aa11.54□□□□□ -0.56
LSAMP-204ENST00000475403 MAGI2Q86UL8 1455 aa11.54□□□□□ -0.56
LSAMP-204ENST00000475403 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
LSAMP-204ENST00000475403 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms