RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 JPH4Q96JJ6 628 aa25.91■■□□□ 1.74
ATG9A-220ENST00000475339 MAPKBP1O60336 1514 aa25.91■■□□□ 1.74
ATG9A-220ENST00000475339 FHAD1B1AJZ9 1412 aa25.9■■□□□ 1.74
ATG9A-220ENST00000475339 TSPOAP1O95153 1857 aa25.83■■□□□ 1.72
ATG9A-220ENST00000475339 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
ATG9A-220ENST00000475339 ADCY10Q96PN6 1610 aa25.77■■□□□ 1.72
ATG9A-220ENST00000475339 ADGRL1O94910 1474 aa25.77■■□□□ 1.72
ATG9A-220ENST00000475339 HECW2Q9P2P5 1572 aa25.73■■□□□ 1.71
ATG9A-220ENST00000475339 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
ATG9A-220ENST00000475339 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
ATG9A-220ENST00000475339 FBXO41Q8TF61 875 aa25.57■■□□□ 1.68
ATG9A-220ENST00000475339 TOP2BQ02880 1626 aa25.53■■□□□ 1.68
ATG9A-220ENST00000475339 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
ATG9A-220ENST00000475339 BIVM-ERCC5R4GMW8 1640 aa25.51■■□□□ 1.67
ATG9A-220ENST00000475339 PPRC1Q5VV67 1664 aaKnown RBP25.5■■□□□ 1.67
ATG9A-220ENST00000475339 TTBK1Q5TCY1 1321 aaPredicted RBP25.48■■□□□ 1.67
ATG9A-220ENST00000475339 ASXL2Q76L83 1435 aa25.46■■□□□ 1.67
ATG9A-220ENST00000475339 PTPRGP23470 1445 aa25.45■■□□□ 1.66
ATG9A-220ENST00000475339 KIAA0586Q9BVV6 1533 aa25.44■■□□□ 1.66
ATG9A-220ENST00000475339 GLI2P10070 1586 aa25.44■■□□□ 1.66
ATG9A-220ENST00000475339 PLB1Q6P1J6 1458 aa25.41■■□□□ 1.66
ATG9A-220ENST00000475339 ABCC2Q92887 1545 aa25.41■■□□□ 1.66
ATG9A-220ENST00000475339 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
ATG9A-220ENST00000475339 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
ATG9A-220ENST00000475339 EPRSP07814 1512 aaKnown RBP25.27■■□□□ 1.64
ATG9A-220ENST00000475339 CUL7Q14999 1698 aa25.26■■□□□ 1.63
ATG9A-220ENST00000475339 MAP3K4Q9Y6R4 1608 aa25.26■■□□□ 1.63
ATG9A-220ENST00000475339 IGF1RP08069 1367 aa25.23■■□□□ 1.63
ATG9A-220ENST00000475339 UHRF1BP1LA0JNW5 1464 aa25.22■■□□□ 1.63
ATG9A-220ENST00000475339 CARMIL2Q6F5E8 1435 aa25.22■■□□□ 1.63
ATG9A-220ENST00000475339 LMTK3Q96Q04 1460 aa25.2■■□□□ 1.62
ATG9A-220ENST00000475339 UACAQ9BZF9 1416 aa25.2■■□□□ 1.62
ATG9A-220ENST00000475339 KDM5BQ9UGL1 1544 aa25.14■■□□□ 1.62
ATG9A-220ENST00000475339 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
ATG9A-220ENST00000475339 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
ATG9A-220ENST00000475339 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
ATG9A-220ENST00000475339 KIF21BO75037 1637 aa25.04■■□□□ 1.6
ATG9A-220ENST00000475339 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
ATG9A-220ENST00000475339 DISP1Q96F81 1524 aa25.02■■□□□ 1.6
ATG9A-220ENST00000475339 IQGAP2Q13576 1575 aa25.01■■□□□ 1.59
ATG9A-220ENST00000475339 WDR7Q9Y4E6 1490 aa25.01■■□□□ 1.59
ATG9A-220ENST00000475339 CD109Q6YHK3 1445 aa25■■□□□ 1.59
ATG9A-220ENST00000475339 PTPRMP28827 1452 aa25■■□□□ 1.59
ATG9A-220ENST00000475339 ILDR2Q71H61 639 aa24.99■■□□□ 1.59
ATG9A-220ENST00000475339 MAGI3Q5TCQ9 1506 aa24.98■■□□□ 1.59
ATG9A-220ENST00000475339 SOCS7O14512 581 aa24.96■■□□□ 1.59
ATG9A-220ENST00000475339 KCNH8Q96L42 1107 aa24.96■■□□□ 1.59
ATG9A-220ENST00000475339 PCF11O94913 1555 aaKnown RBP24.9■■□□□ 1.58
ATG9A-220ENST00000475339 ADAMTSL3P82987 1691 aa24.89■■□□□ 1.58
ATG9A-220ENST00000475339 DISP3Q9P2K9 1392 aa24.89■■□□□ 1.57
ATG9A-220ENST00000475339 CFAP43Q8NDM7 1665 aa24.88■■□□□ 1.57
ATG9A-220ENST00000475339 CERKQ8TCT0 537 aa24.84■■□□□ 1.57
ATG9A-220ENST00000475339 UGGT2Q9NYU1 1516 aa24.83■■□□□ 1.57
ATG9A-220ENST00000475339 ARAP3Q8WWN8 1544 aa24.82■■□□□ 1.56
ATG9A-220ENST00000475339 HSPA2P54652 639 aa24.81■■□□□ 1.56
ATG9A-220ENST00000475339 KIAA0556O60303 1618 aa24.8■■□□□ 1.56
ATG9A-220ENST00000475339 ARID4BQ4LE39 1312 aaPredicted RBP24.76■■□□□ 1.55
ATG9A-220ENST00000475339 RAPGEF3O95398 923 aa24.75■■□□□ 1.55
ATG9A-220ENST00000475339 MADDQ8WXG6 1647 aa24.75■■□□□ 1.55
ATG9A-220ENST00000475339 BCORL1Q5H9F3 1711 aa24.72■■□□□ 1.55
ATG9A-220ENST00000475339 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
ATG9A-220ENST00000475339 ABCA8O94911 1581 aa24.66■■□□□ 1.54
ATG9A-220ENST00000475339 PHLDB1Q86UU1 1377 aa24.65■■□□□ 1.54
ATG9A-220ENST00000475339 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.54
ATG9A-220ENST00000475339 ARID3CA6NKF2 412 aa24.63■■□□□ 1.53
ATG9A-220ENST00000475339 RIMS1Q86UR5 1692 aaKnown RBP24.62■■□□□ 1.53
ATG9A-220ENST00000475339 FRMPD1Q5SYB0 1578 aa24.54■■□□□ 1.52
ATG9A-220ENST00000475339 GOLGA3Q08378 1498 aa24.53■■□□□ 1.52
ATG9A-220ENST00000475339 NEO1Q92859 1461 aa24.53■■□□□ 1.52
ATG9A-220ENST00000475339 SPATA31D1Q6ZQQ2 1576 aa24.53■■□□□ 1.52
ATG9A-220ENST00000475339 ABCA9Q8IUA7 1624 aa24.52■■□□□ 1.52
ATG9A-220ENST00000475339 ATP10BO94823 1461 aa24.51■■□□□ 1.51
ATG9A-220ENST00000475339 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
ATG9A-220ENST00000475339 MLECQ14165 292 aa24.42■■□□□ 1.5
ATG9A-220ENST00000475339 POGZQ7Z3K3 1410 aa24.42■■□□□ 1.5
ATG9A-220ENST00000475339 CTTNBP2Q8WZ74 1663 aa24.4■■□□□ 1.5
ATG9A-220ENST00000475339 FANCAO15360 1455 aa24.38■■□□□ 1.49
ATG9A-220ENST00000475339 P3H3Q8IVL6 736 aa24.38■■□□□ 1.49
ATG9A-220ENST00000475339 DENND4BO75064 1496 aaPredicted RBP24.38■■□□□ 1.49
ATG9A-220ENST00000475339 YEATS2Q9ULM3 1422 aa24.37■■□□□ 1.49
ATG9A-220ENST00000475339 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
ATG9A-220ENST00000475339 AKNAQ7Z591 1439 aa24.36■■□□□ 1.49
ATG9A-220ENST00000475339 DMRT2Q9Y5R5 561 aa24.36■■□□□ 1.49
ATG9A-220ENST00000475339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.34■■□□□ 1.49
ATG9A-220ENST00000475339 HNRNPUL2Q1KMD3 747 aaKnown RBP24.34■■□□□ 1.49
ATG9A-220ENST00000475339 SIGLEC1Q9BZZ2 1709 aa24.34■■□□□ 1.49
ATG9A-220ENST00000475339 FHOD3Q2V2M9 1422 aa24.34■■□□□ 1.49
ATG9A-220ENST00000475339 RICTORQ6R327 1708 aa24.32■■□□□ 1.48
ATG9A-220ENST00000475339 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
ATG9A-220ENST00000475339 CEBPAP49715 358 aaPredicted RBP24.29■■□□□ 1.48
ATG9A-220ENST00000475339 STRCQ7RTU9 1775 aa24.29■■□□□ 1.48
ATG9A-220ENST00000475339 FER1L4A9Z1Z3 1794 aa24.28■■□□□ 1.48
ATG9A-220ENST00000475339 ZFYVE16Q7Z3T8 1539 aa24.26■■□□□ 1.47
ATG9A-220ENST00000475339 PREX1Q8TCU6 1659 aa24.25■■□□□ 1.47
ATG9A-220ENST00000475339 ZMYM4Q5VZL5 1548 aa24.24■■□□□ 1.47
ATG9A-220ENST00000475339 EFCAB5A4FU69 1503 aa24.23■■□□□ 1.47
ATG9A-220ENST00000475339 MAGI2Q86UL8 1455 aa24.19■■□□□ 1.46
ATG9A-220ENST00000475339 ARHGEF12Q9NZN5 1544 aa24.19■■□□□ 1.46
ATG9A-220ENST00000475339 RAPGEF6Q8TEU7 1601 aa24.17■■□□□ 1.46
ATG9A-220ENST00000475339 PTPRTO14522 1441 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms