RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 ZNF608Q9ULD9 1512 aaPredicted RBP28.05■■■□□ 2.08
SEC61A2-213ENST00000475268 P3H3Q8IVL6 736 aa28.03■■■□□ 2.08
SEC61A2-213ENST00000475268 GRIN2BQ13224 1484 aa28.02■■■□□ 2.08
SEC61A2-213ENST00000475268 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
SEC61A2-213ENST00000475268 EFCAB5A4FU69 1503 aa27.97■■■□□ 2.07
SEC61A2-213ENST00000475268 KANK4Q5T7N3 995 aaPredicted RBP27.97■■■□□ 2.07
SEC61A2-213ENST00000475268 ADAMTS12P58397 1594 aa27.96■■■□□ 2.07
SEC61A2-213ENST00000475268 FHOD3Q2V2M9 1422 aa27.94■■■□□ 2.06
SEC61A2-213ENST00000475268 EIF4G3O43432 1585 aaKnown RBP27.9■■■□□ 2.06
SEC61A2-213ENST00000475268 ZEB1P37275 1124 aaPredicted RBP27.88■■■□□ 2.05
SEC61A2-213ENST00000475268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.84■■■□□ 2.05
SEC61A2-213ENST00000475268 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
SEC61A2-213ENST00000475268 PCF11O94913 1555 aaKnown RBP27.83■■■□□ 2.05
SEC61A2-213ENST00000475268 TIAM1Q13009 1591 aa27.82■■■□□ 2.04
SEC61A2-213ENST00000475268 SAMD9Q5K651 1589 aa27.82■■■□□ 2.04
SEC61A2-213ENST00000475268 ATP1B4Q9UN42 357 aaPredicted RBP27.82■■■□□ 2.04
SEC61A2-213ENST00000475268 MAP3K1Q13233 1512 aa27.81■■■□□ 2.04
SEC61A2-213ENST00000475268 HNRNPUL2Q1KMD3 747 aaKnown RBP27.79■■■□□ 2.04
SEC61A2-213ENST00000475268 FMN1Q68DA7 1419 aa27.77■■■□□ 2.04
SEC61A2-213ENST00000475268 CCER1Q8TC90 406 aaPredicted RBP27.77■■■□□ 2.04
SEC61A2-213ENST00000475268 FYCO1Q9BQS8 1478 aa27.76■■■□□ 2.03
SEC61A2-213ENST00000475268 CASKIN1Q8WXD9 1431 aa27.76■■■□□ 2.03
SEC61A2-213ENST00000475268 IQGAP2Q13576 1575 aa27.75■■■□□ 2.03
SEC61A2-213ENST00000475268 MAGI1Q96QZ7 1491 aaPredicted RBP27.71■■■□□ 2.03
SEC61A2-213ENST00000475268 LRRC9Q6ZRR7 1453 aa27.71■■■□□ 2.03
SEC61A2-213ENST00000475268 GRIN2AQ12879 1464 aa27.7■■■□□ 2.02
SEC61A2-213ENST00000475268 CFAP43Q8NDM7 1665 aa27.69■■■□□ 2.02
SEC61A2-213ENST00000475268 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
SEC61A2-213ENST00000475268 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
SEC61A2-213ENST00000475268 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
SEC61A2-213ENST00000475268 KIAA0586Q9BVV6 1533 aa27.63■■■□□ 2.01
SEC61A2-213ENST00000475268 FBLN2P98095 1184 aa27.62■■■□□ 2.01
SEC61A2-213ENST00000475268 UGGT2Q9NYU1 1516 aa27.59■■■□□ 2.01
SEC61A2-213ENST00000475268 CCNB3Q8WWL7 1395 aa27.59■■■□□ 2.01
SEC61A2-213ENST00000475268 PHLDB1Q86UU1 1377 aa27.52■■■□□ 2
SEC61A2-213ENST00000475268 CEP170Q5SW79 1584 aa27.52■■■□□ 2
SEC61A2-213ENST00000475268 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
SEC61A2-213ENST00000475268 DISP1Q96F81 1524 aa27.47■■□□□ 1.99
SEC61A2-213ENST00000475268 KIAA0556O60303 1618 aa27.46■■□□□ 1.99
SEC61A2-213ENST00000475268 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
SEC61A2-213ENST00000475268 NUP160Q12769 1436 aa27.44■■□□□ 1.98
SEC61A2-213ENST00000475268 ITGAEP38570 1179 aa27.43■■□□□ 1.98
SEC61A2-213ENST00000475268 HECW1Q76N89 1606 aa27.42■■□□□ 1.98
SEC61A2-213ENST00000475268 CCDC18Q5T9S5 1454 aa27.4■■□□□ 1.98
SEC61A2-213ENST00000475268 FAM50AQ14320 339 aaKnown RBP27.37■■□□□ 1.97
SEC61A2-213ENST00000475268 JPH4Q96JJ6 628 aa27.35■■□□□ 1.97
SEC61A2-213ENST00000475268 EPRSP07814 1512 aaKnown RBP27.35■■□□□ 1.97
SEC61A2-213ENST00000475268 EHBP1L1Q8N3D4 1523 aa27.32■■□□□ 1.96
SEC61A2-213ENST00000475268 ARID3CA6NKF2 412 aa27.32■■□□□ 1.96
SEC61A2-213ENST00000475268 CDK13Q14004 1512 aaKnown RBP27.3■■□□□ 1.96
SEC61A2-213ENST00000475268 MAGI3Q5TCQ9 1506 aa27.3■■□□□ 1.96
SEC61A2-213ENST00000475268 NCOA2Q15596 1464 aa27.29■■□□□ 1.96
SEC61A2-213ENST00000475268 CARMIL2Q6F5E8 1435 aa27.29■■□□□ 1.96
SEC61A2-213ENST00000475268 SUPT6HQ7KZ85 1726 aaKnown RBP27.28■■□□□ 1.96
SEC61A2-213ENST00000475268 FGD6Q6ZV73 1430 aa27.26■■□□□ 1.95
SEC61A2-213ENST00000475268 RAPGEF6Q8TEU7 1601 aa27.25■■□□□ 1.95
SEC61A2-213ENST00000475268 CHD1O14646 1710 aa27.23■■□□□ 1.95
SEC61A2-213ENST00000475268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.22■■□□□ 1.95
SEC61A2-213ENST00000475268 NUP153P49790 1475 aaKnown RBP27.22■■□□□ 1.95
SEC61A2-213ENST00000475268 MYOM3Q5VTT5 1437 aa27.21■■□□□ 1.95
SEC61A2-213ENST00000475268 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
SEC61A2-213ENST00000475268 ARHGEF11O15085 1522 aa27.18■■□□□ 1.94
SEC61A2-213ENST00000475268 PLB1Q6P1J6 1458 aa27.17■■□□□ 1.94
SEC61A2-213ENST00000475268 RAB3GAP2Q9H2M9 1393 aa27.15■■□□□ 1.94
SEC61A2-213ENST00000475268 SETD5Q9C0A6 1442 aa27.13■■□□□ 1.93
SEC61A2-213ENST00000475268 PRG4Q92954 1404 aaPredicted RBP27.12■■□□□ 1.93
SEC61A2-213ENST00000475268 CDK11AQ9UQ88 783 aaPredicted RBP27.09■■□□□ 1.93
SEC61A2-213ENST00000475268 CLSPNQ9HAW4 1339 aa27.08■■□□□ 1.93
SEC61A2-213ENST00000475268 PTPN23Q9H3S7 1636 aa27.07■■□□□ 1.92
SEC61A2-213ENST00000475268 ABCA8O94911 1581 aa27.02■■□□□ 1.92
SEC61A2-213ENST00000475268 PTPRGP23470 1445 aa27■■□□□ 1.91
SEC61A2-213ENST00000475268 PTPRKQ15262 1439 aa27■■□□□ 1.91
SEC61A2-213ENST00000475268 TCOF1Q13428 1488 aaKnown RBP26.99■■□□□ 1.91
SEC61A2-213ENST00000475268 SHROOM2Q13796 1616 aa26.99■■□□□ 1.91
SEC61A2-213ENST00000475268 MIA2Q96PC5 1412 aa26.98■■□□□ 1.91
SEC61A2-213ENST00000475268 TROQ12816 1431 aaPredicted RBP26.98■■□□□ 1.91
SEC61A2-213ENST00000475268 ATP10BO94823 1461 aa26.92■■□□□ 1.9
SEC61A2-213ENST00000475268 HFM1A2PYH4 1435 aa26.9■■□□□ 1.9
SEC61A2-213ENST00000475268 PLEKHD1A6NEE1 506 aa26.88■■□□□ 1.89
SEC61A2-213ENST00000475268 ERCC6L2Q5T890 1561 aa26.87■■□□□ 1.89
SEC61A2-213ENST00000475268 CLASP1Q7Z460 1538 aa26.87■■□□□ 1.89
SEC61A2-213ENST00000475268 KIF14Q15058 1648 aa26.86■■□□□ 1.89
SEC61A2-213ENST00000475268 MAPKBP1O60336 1514 aa26.85■■□□□ 1.89
SEC61A2-213ENST00000475268 CHIC2Q9UKJ5 165 aa26.85■■□□□ 1.89
SEC61A2-213ENST00000475268 ADCY10Q96PN6 1610 aa26.85■■□□□ 1.89
SEC61A2-213ENST00000475268 NAIPQ13075 1403 aa26.84■■□□□ 1.89
SEC61A2-213ENST00000475268 UACAQ9BZF9 1416 aa26.83■■□□□ 1.89
SEC61A2-213ENST00000475268 ZNF644Q9H582 1327 aaPredicted RBP26.82■■□□□ 1.88
SEC61A2-213ENST00000475268 RRP7BPQ9NSQ0 103 aa26.8■■□□□ 1.88
SEC61A2-213ENST00000475268 CFDP1Q9UEE9 299 aaPredicted RBP26.8■■□□□ 1.88
SEC61A2-213ENST00000475268 GPATCH8Q9UKJ3 1502 aaKnown RBP26.79■■□□□ 1.88
SEC61A2-213ENST00000475268 ITSN2Q9NZM3 1697 aa26.78■■□□□ 1.88
SEC61A2-213ENST00000475268 ZNF316A6NFI3 1004 aaPredicted RBP26.76■■□□□ 1.87
SEC61A2-213ENST00000475268 DAPK1P53355 1430 aa26.75■■□□□ 1.87
SEC61A2-213ENST00000475268 ZNF777Q9ULD5 760 aaPredicted RBP26.73■■□□□ 1.87
SEC61A2-213ENST00000475268 CAMSAP2Q08AD1 1489 aa26.72■■□□□ 1.87
SEC61A2-213ENST00000475268 AKNAQ7Z591 1439 aa26.72■■□□□ 1.87
SEC61A2-213ENST00000475268 DNMT1P26358 1616 aaKnown RBP26.72■■□□□ 1.87
SEC61A2-213ENST00000475268 ABCC5O15440 1437 aa26.72■■□□□ 1.87
SEC61A2-213ENST00000475268 GCC2Q8IWJ2 1684 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms