RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
RTN4R-206ENST00000474642 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
RTN4R-206ENST00000474642 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
RTN4R-206ENST00000474642 MAPKBP1O60336 1514 aa23.95■■□□□ 1.43
RTN4R-206ENST00000474642 DIP2BQ9P265 1576 aa23.94■■□□□ 1.42
RTN4R-206ENST00000474642 KDM6BO15054 1643 aa23.92■■□□□ 1.42
RTN4R-206ENST00000474642 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
RTN4R-206ENST00000474642 ILDR1Q86SU0 546 aaPredicted RBP23.88■■□□□ 1.41
RTN4R-206ENST00000474642 RUSC2Q8N2Y8 1516 aa23.88■■□□□ 1.41
RTN4R-206ENST00000474642 ADCY10Q96PN6 1610 aa23.88■■□□□ 1.41
RTN4R-206ENST00000474642 TSPOAP1O95153 1857 aa23.86■■□□□ 1.41
RTN4R-206ENST00000474642 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
RTN4R-206ENST00000474642 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
RTN4R-206ENST00000474642 PTPRGP23470 1445 aa23.68■■□□□ 1.38
RTN4R-206ENST00000474642 IGF1RP08069 1367 aa23.63■■□□□ 1.37
RTN4R-206ENST00000474642 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
RTN4R-206ENST00000474642 ASXL2Q76L83 1435 aa23.59■■□□□ 1.37
RTN4R-206ENST00000474642 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
RTN4R-206ENST00000474642 PLB1Q6P1J6 1458 aa23.59■■□□□ 1.37
RTN4R-206ENST00000474642 CUL7Q14999 1698 aa23.57■■□□□ 1.36
RTN4R-206ENST00000474642 TNIKQ9UKE5 1360 aa23.57■■□□□ 1.36
RTN4R-206ENST00000474642 CARMIL2Q6F5E8 1435 aa23.57■■□□□ 1.36
RTN4R-206ENST00000474642 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
RTN4R-206ENST00000474642 PPRC1Q5VV67 1664 aaKnown RBP23.55■■□□□ 1.36
RTN4R-206ENST00000474642 GLI2P10070 1586 aa23.55■■□□□ 1.36
RTN4R-206ENST00000474642 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
RTN4R-206ENST00000474642 HECW2Q9P2P5 1572 aa23.48■■□□□ 1.35
RTN4R-206ENST00000474642 UHRF1BP1LA0JNW5 1464 aa23.47■■□□□ 1.35
RTN4R-206ENST00000474642 COL17A1Q9UMD9 1497 aaPredicted RBP23.47■■□□□ 1.35
RTN4R-206ENST00000474642 UACAQ9BZF9 1416 aa23.46■■□□□ 1.35
RTN4R-206ENST00000474642 EPRSP07814 1512 aaKnown RBP23.43■■□□□ 1.34
RTN4R-206ENST00000474642 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
RTN4R-206ENST00000474642 IQGAP2Q13576 1575 aa23.41■■□□□ 1.34
RTN4R-206ENST00000474642 MAP3K4Q9Y6R4 1608 aa23.4■■□□□ 1.34
RTN4R-206ENST00000474642 KDM5BQ9UGL1 1544 aa23.37■■□□□ 1.33
RTN4R-206ENST00000474642 DISP1Q96F81 1524 aa23.33■■□□□ 1.33
RTN4R-206ENST00000474642 ZCCHC11Q5TAX3 1644 aaKnown RBP23.31■■□□□ 1.32
RTN4R-206ENST00000474642 WDR7Q9Y4E6 1490 aa23.25■■□□□ 1.31
RTN4R-206ENST00000474642 UGGT2Q9NYU1 1516 aa23.23■■□□□ 1.31
RTN4R-206ENST00000474642 FBXO41Q8TF61 875 aa23.22■■□□□ 1.31
RTN4R-206ENST00000474642 KIAA0556O60303 1618 aa23.2■■□□□ 1.3
RTN4R-206ENST00000474642 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
RTN4R-206ENST00000474642 KCNH8Q96L42 1107 aa23.2■■□□□ 1.3
RTN4R-206ENST00000474642 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
RTN4R-206ENST00000474642 MAGI3Q5TCQ9 1506 aa23.17■■□□□ 1.3
RTN4R-206ENST00000474642 CFAP43Q8NDM7 1665 aa23.14■■□□□ 1.29
RTN4R-206ENST00000474642 KIF21BO75037 1637 aa23.11■■□□□ 1.29
RTN4R-206ENST00000474642 GOLGA3Q08378 1498 aa23.04■■□□□ 1.28
RTN4R-206ENST00000474642 ABCA8O94911 1581 aa23.02■■□□□ 1.28
RTN4R-206ENST00000474642 ARAP3Q8WWN8 1544 aa23.01■■□□□ 1.27
RTN4R-206ENST00000474642 PTPRMP28827 1452 aa22.99■■□□□ 1.27
RTN4R-206ENST00000474642 CTTNBP2Q8WZ74 1663 aa22.97■■□□□ 1.27
RTN4R-206ENST00000474642 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
RTN4R-206ENST00000474642 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
RTN4R-206ENST00000474642 ADAMTSL3P82987 1691 aa22.94■■□□□ 1.26
RTN4R-206ENST00000474642 PHLDB1Q86UU1 1377 aa22.93■■□□□ 1.26
RTN4R-206ENST00000474642 ARID4BQ4LE39 1312 aaPredicted RBP22.92■■□□□ 1.26
RTN4R-206ENST00000474642 RAPGEF3O95398 923 aa22.92■■□□□ 1.26
RTN4R-206ENST00000474642 PCF11O94913 1555 aaKnown RBP22.87■■□□□ 1.25
RTN4R-206ENST00000474642 ATP10BO94823 1461 aa22.86■■□□□ 1.25
RTN4R-206ENST00000474642 ABCA9Q8IUA7 1624 aa22.84■■□□□ 1.25
RTN4R-206ENST00000474642 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
RTN4R-206ENST00000474642 BCORL1Q5H9F3 1711 aa22.84■■□□□ 1.25
RTN4R-206ENST00000474642 LMTK3Q96Q04 1460 aa22.83■■□□□ 1.25
RTN4R-206ENST00000474642 MADDQ8WXG6 1647 aa22.82■■□□□ 1.24
RTN4R-206ENST00000474642 NEO1Q92859 1461 aa22.81■■□□□ 1.24
RTN4R-206ENST00000474642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.79■■□□□ 1.24
RTN4R-206ENST00000474642 HNRNPUL2Q1KMD3 747 aaKnown RBP22.79■■□□□ 1.24
RTN4R-206ENST00000474642 HSPA2P54652 639 aa22.76■■□□□ 1.23
RTN4R-206ENST00000474642 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
RTN4R-206ENST00000474642 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
RTN4R-206ENST00000474642 FRMPD1Q5SYB0 1578 aa22.75■■□□□ 1.23
RTN4R-206ENST00000474642 RIMS1Q86UR5 1692 aaKnown RBP22.74■■□□□ 1.23
RTN4R-206ENST00000474642 CERKQ8TCT0 537 aa22.71■■□□□ 1.23
RTN4R-206ENST00000474642 ARHGEF40Q8TER5 1519 aa22.68■■□□□ 1.22
RTN4R-206ENST00000474642 RAPGEF6Q8TEU7 1601 aa22.68■■□□□ 1.22
RTN4R-206ENST00000474642 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
RTN4R-206ENST00000474642 POGZQ7Z3K3 1410 aa22.66■■□□□ 1.22
RTN4R-206ENST00000474642 FANCAO15360 1455 aa22.63■■□□□ 1.21
RTN4R-206ENST00000474642 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
RTN4R-206ENST00000474642 PLEKHD1A6NEE1 506 aa22.62■■□□□ 1.21
RTN4R-206ENST00000474642 RICTORQ6R327 1708 aa22.62■■□□□ 1.21
RTN4R-206ENST00000474642 FHOD3Q2V2M9 1422 aa22.61■■□□□ 1.21
RTN4R-206ENST00000474642 MLECQ14165 292 aa22.6■■□□□ 1.21
RTN4R-206ENST00000474642 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
RTN4R-206ENST00000474642 NUP153P49790 1475 aaKnown RBP22.59■■□□□ 1.21
RTN4R-206ENST00000474642 DISP3Q9P2K9 1392 aa22.57■■□□□ 1.2
RTN4R-206ENST00000474642 CFAP74Q9C0B2 1584 aa22.56■■□□□ 1.2
RTN4R-206ENST00000474642 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
RTN4R-206ENST00000474642 ZFYVE16Q7Z3T8 1539 aa22.55■■□□□ 1.2
RTN4R-206ENST00000474642 YEATS2Q9ULM3 1422 aa22.55■■□□□ 1.2
RTN4R-206ENST00000474642 EFCAB5A4FU69 1503 aa22.54■■□□□ 1.2
RTN4R-206ENST00000474642 ZMYM4Q5VZL5 1548 aa22.53■■□□□ 1.2
RTN4R-206ENST00000474642 ILDR2Q71H61 639 aa22.53■■□□□ 1.2
RTN4R-206ENST00000474642 FER1L4A9Z1Z3 1794 aa22.51■■□□□ 1.19
RTN4R-206ENST00000474642 SOCS7O14512 581 aa22.51■■□□□ 1.19
RTN4R-206ENST00000474642 MAGI2Q86UL8 1455 aa22.51■■□□□ 1.19
RTN4R-206ENST00000474642 SIGLEC1Q9BZZ2 1709 aa22.5■■□□□ 1.19
RTN4R-206ENST00000474642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.5■■□□□ 1.196e-6■■■■■ 38.2
RTN4R-206ENST00000474642 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms