RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
GAPDH-208ENST00000474249 ABCC10Q5T3U5 1492 aa23.67■■□□□ 1.38
GAPDH-208ENST00000474249 IGF1RP08069 1367 aa23.67■■□□□ 1.38
GAPDH-208ENST00000474249 MAPKBP1O60336 1514 aa23.64■■□□□ 1.38
GAPDH-208ENST00000474249 FAM69CQ0P6D2 419 aa23.62■■□□□ 1.37
GAPDH-208ENST00000474249 KIAA0586Q9BVV6 1533 aa23.62■■□□□ 1.37
GAPDH-208ENST00000474249 ADCY10Q96PN6 1610 aa23.61■■□□□ 1.37
GAPDH-208ENST00000474249 NPM1P06748 294 aaKnown RBP eCLIP23.57■■□□□ 1.36
GAPDH-208ENST00000474249 DIP2BQ9P265 1576 aa23.56■■□□□ 1.36
GAPDH-208ENST00000474249 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
GAPDH-208ENST00000474249 CUL7Q14999 1698 aa23.5■■□□□ 1.35
GAPDH-208ENST00000474249 PTPRGP23470 1445 aa23.44■■□□□ 1.34
GAPDH-208ENST00000474249 CARMIL1Q5VZK9 1371 aa23.43■■□□□ 1.34
GAPDH-208ENST00000474249 KDM4FA0A1W2PPD8 638 aa23.42■■□□□ 1.34
GAPDH-208ENST00000474249 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
GAPDH-208ENST00000474249 KDM6BO15054 1643 aa23.37■■□□□ 1.33
GAPDH-208ENST00000474249 ABCC2Q92887 1545 aa23.36■■□□□ 1.33
GAPDH-208ENST00000474249 TSPOAP1O95153 1857 aa23.33■■□□□ 1.33
GAPDH-208ENST00000474249 CARMIL2Q6F5E8 1435 aa23.32■■□□□ 1.32
GAPDH-208ENST00000474249 UHRF1BP1LA0JNW5 1464 aa23.32■■□□□ 1.32
GAPDH-208ENST00000474249 GLI2P10070 1586 aa23.3■■□□□ 1.32
GAPDH-208ENST00000474249 DISP1Q96F81 1524 aa23.3■■□□□ 1.32
GAPDH-208ENST00000474249 IQGAP2Q13576 1575 aa23.29■■□□□ 1.32
GAPDH-208ENST00000474249 ASXL2Q76L83 1435 aa23.29■■□□□ 1.32
GAPDH-208ENST00000474249 PLB1Q6P1J6 1458 aa23.27■■□□□ 1.32
GAPDH-208ENST00000474249 PPRC1Q5VV67 1664 aaKnown RBP23.27■■□□□ 1.32
GAPDH-208ENST00000474249 UACAQ9BZF9 1416 aa23.25■■□□□ 1.31
GAPDH-208ENST00000474249 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
GAPDH-208ENST00000474249 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
GAPDH-208ENST00000474249 UGGT2Q9NYU1 1516 aa23.2■■□□□ 1.3
GAPDH-208ENST00000474249 COL17A1Q9UMD9 1497 aaPredicted RBP23.2■■□□□ 1.3
GAPDH-208ENST00000474249 EPRSP07814 1512 aaKnown RBP23.17■■□□□ 1.3
GAPDH-208ENST00000474249 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
GAPDH-208ENST00000474249 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
GAPDH-208ENST00000474249 KIAA0556O60303 1618 aa23.1■■□□□ 1.29
GAPDH-208ENST00000474249 ZCCHC11Q5TAX3 1644 aaKnown RBP23.08■■□□□ 1.29
GAPDH-208ENST00000474249 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
GAPDH-208ENST00000474249 TEX14Q8IWB6 1497 aa23.02■■□□□ 1.28
GAPDH-208ENST00000474249 WDR7Q9Y4E6 1490 aa23■■□□□ 1.27
GAPDH-208ENST00000474249 ABCA8O94911 1581 aa22.95■■□□□ 1.26
GAPDH-208ENST00000474249 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
GAPDH-208ENST00000474249 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
GAPDH-208ENST00000474249 CTTNBP2Q8WZ74 1663 aa22.92■■□□□ 1.26
GAPDH-208ENST00000474249 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
GAPDH-208ENST00000474249 ILDR1Q86SU0 546 aaPredicted RBP22.91■■□□□ 1.26
GAPDH-208ENST00000474249 CD109Q6YHK3 1445 aa22.9■■□□□ 1.26
GAPDH-208ENST00000474249 CFAP43Q8NDM7 1665 aa22.86■■□□□ 1.25
GAPDH-208ENST00000474249 KCNH8Q96L42 1107 aa22.85■■□□□ 1.25
GAPDH-208ENST00000474249 HECW2Q9P2P5 1572 aa22.82■■□□□ 1.24
GAPDH-208ENST00000474249 ATP10BO94823 1461 aa22.79■■□□□ 1.24
GAPDH-208ENST00000474249 ARAP3Q8WWN8 1544 aa22.78■■□□□ 1.24
GAPDH-208ENST00000474249 P3H3Q8IVL6 736 aa22.7■■□□□ 1.22
GAPDH-208ENST00000474249 ABCA9Q8IUA7 1624 aa22.69■■□□□ 1.22
GAPDH-208ENST00000474249 PHLDB1Q86UU1 1377 aa22.68■■□□□ 1.22
GAPDH-208ENST00000474249 SAMD9Q5K651 1589 aa22.67■■□□□ 1.22
GAPDH-208ENST00000474249 KIF21BO75037 1637 aa22.67■■□□□ 1.22
GAPDH-208ENST00000474249 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
GAPDH-208ENST00000474249 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.22
GAPDH-208ENST00000474249 RAPGEF3O95398 923 aa22.61■■□□□ 1.21
GAPDH-208ENST00000474249 NEO1Q92859 1461 aa22.6■■□□□ 1.21
GAPDH-208ENST00000474249 ADAMTSL3P82987 1691 aa22.6■■□□□ 1.21
GAPDH-208ENST00000474249 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
GAPDH-208ENST00000474249 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
GAPDH-208ENST00000474249 NUP153P49790 1475 aaKnown RBP22.57■■□□□ 1.2
GAPDH-208ENST00000474249 PTPRMP28827 1452 aa22.56■■□□□ 1.2
GAPDH-208ENST00000474249 FRMPD1Q5SYB0 1578 aa22.55■■□□□ 1.2
GAPDH-208ENST00000474249 BCORL1Q5H9F3 1711 aa22.48■■□□□ 1.19
GAPDH-208ENST00000474249 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
GAPDH-208ENST00000474249 EEA1Q15075 1411 aa22.45■■□□□ 1.19
GAPDH-208ENST00000474249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.45■■□□□ 1.18
GAPDH-208ENST00000474249 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
GAPDH-208ENST00000474249 PLEKHD1A6NEE1 506 aa22.43■■□□□ 1.18
GAPDH-208ENST00000474249 AKNAQ7Z591 1439 aa22.42■■□□□ 1.18
GAPDH-208ENST00000474249 RICTORQ6R327 1708 aa22.41■■□□□ 1.18
GAPDH-208ENST00000474249 FBXO41Q8TF61 875 aa22.41■■□□□ 1.18
GAPDH-208ENST00000474249 MADDQ8WXG6 1647 aa22.41■■□□□ 1.18
GAPDH-208ENST00000474249 DENND4BO75064 1496 aaPredicted RBP22.41■■□□□ 1.18
GAPDH-208ENST00000474249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.181e-323■■■□□ 18.8
GAPDH-208ENST00000474249 LMTK3Q96Q04 1460 aa22.39■■□□□ 1.18
GAPDH-208ENST00000474249 ARHGEF40Q8TER5 1519 aa22.38■■□□□ 1.17
GAPDH-208ENST00000474249 FANCAO15360 1455 aa22.38■■□□□ 1.17
GAPDH-208ENST00000474249 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
GAPDH-208ENST00000474249 PCF11O94913 1555 aaKnown RBP22.36■■□□□ 1.17
GAPDH-208ENST00000474249 ARID4BQ4LE39 1312 aaPredicted RBP22.36■■□□□ 1.17
GAPDH-208ENST00000474249 ZMYM4Q5VZL5 1548 aa22.34■■□□□ 1.17
GAPDH-208ENST00000474249 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
GAPDH-208ENST00000474249 TTC37Q6PGP7 1564 aa22.33■■□□□ 1.17
GAPDH-208ENST00000474249 SIGLEC1Q9BZZ2 1709 aa22.33■■□□□ 1.17
GAPDH-208ENST00000474249 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
GAPDH-208ENST00000474249 CFAP74Q9C0B2 1584 aa22.3■■□□□ 1.16
GAPDH-208ENST00000474249 MAGI2Q86UL8 1455 aa22.3■■□□□ 1.16
GAPDH-208ENST00000474249 PLCH2O75038 1416 aa22.28■■□□□ 1.16
GAPDH-208ENST00000474249 RIMS1Q86UR5 1692 aaKnown RBP22.28■■□□□ 1.16
GAPDH-208ENST00000474249 CDK13Q14004 1512 aaKnown RBP22.27■■□□□ 1.16
GAPDH-208ENST00000474249 ZFYVE16Q7Z3T8 1539 aa22.25■■□□□ 1.15
GAPDH-208ENST00000474249 HECW1Q76N89 1606 aa22.25■■□□□ 1.15
GAPDH-208ENST00000474249 POGZQ7Z3K3 1410 aa22.24■■□□□ 1.15
GAPDH-208ENST00000474249 SCAPERQ9BY12 1400 aa22.23■■□□□ 1.15
GAPDH-208ENST00000474249 HSPA2P54652 639 aa22.22■■□□□ 1.15
GAPDH-208ENST00000474249 ATP10AO60312 1499 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms