RNA–Protein interactions for RNA: ENST00000473039.5

DENND1A-206, Transcript of DENN domain containing 1A, humanhuman

TSL 1 (best)

Gene DENND1A, Length 4,800 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-206ENST00000473039 SIN3AQ96ST3 1273 aa15.47■□□□□ 0.07
DENND1A-206ENST00000473039 CHIC2Q9UKJ5 165 aa15.46■□□□□ 0.07
DENND1A-206ENST00000473039 PPP4R2Q9NY27 417 aa15.45■□□□□ 0.06
DENND1A-206ENST00000473039 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
DENND1A-206ENST00000473039 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
DENND1A-206ENST00000473039 SALL2Q9Y467 1007 aaPredicted RBP15.44■□□□□ 0.06
DENND1A-206ENST00000473039 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
DENND1A-206ENST00000473039 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
DENND1A-206ENST00000473039 CCER2I3L3R5 266 aa15.42■□□□□ 0.06
DENND1A-206ENST00000473039 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
DENND1A-206ENST00000473039 PDS5BQ9NTI5 1447 aa15.41■□□□□ 0.06
DENND1A-206ENST00000473039 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
DENND1A-206ENST00000473039 ZNF777Q9ULD5 760 aaPredicted RBP15.38■□□□□ 0.05
DENND1A-206ENST00000473039 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
DENND1A-206ENST00000473039 NOP58Q9Y2X3 529 aaKnown RBP15.36■□□□□ 0.05
DENND1A-206ENST00000473039 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
DENND1A-206ENST00000473039 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
DENND1A-206ENST00000473039 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
DENND1A-206ENST00000473039 KIF27Q86VH2 1401 aa15.33■□□□□ 0.05
DENND1A-206ENST00000473039 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
DENND1A-206ENST00000473039 UPF2Q9HAU5 1272 aaKnown RBP15.31■□□□□ 0.04
DENND1A-206ENST00000473039 DEKP35659 375 aaKnown RBP15.3■□□□□ 0.04
DENND1A-206ENST00000473039 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
DENND1A-206ENST00000473039 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.29■□□□□ 0.04
DENND1A-206ENST00000473039 DDRGK1Q96HY6 314 aa15.29■□□□□ 0.04
DENND1A-206ENST00000473039 ERICH6BQ5W0A0 696 aa15.27■□□□□ 0.04
DENND1A-206ENST00000473039 SETD5Q9C0A6 1442 aa15.27■□□□□ 0.04
DENND1A-206ENST00000473039 PPM1GO15355 546 aaPredicted RBP15.27■□□□□ 0.03
DENND1A-206ENST00000473039 GLIPR1L2Q4G1C9 344 aa15.26■□□□□ 0.03
DENND1A-206ENST00000473039 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
DENND1A-206ENST00000473039 WIZO95785 1651 aa15.25■□□□□ 0.03
DENND1A-206ENST00000473039 DHX57Q6P158 1386 aaKnown RBP15.24■□□□□ 0.03
DENND1A-206ENST00000473039 RAB3GAP2Q9H2M9 1393 aa15.24■□□□□ 0.03
DENND1A-206ENST00000473039 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
DENND1A-206ENST00000473039 KCNH8Q96L42 1107 aa15.23■□□□□ 0.03
DENND1A-206ENST00000473039 KDM2AQ9Y2K7 1162 aa15.23■□□□□ 0.03
DENND1A-206ENST00000473039 NEFMP07197 916 aa15.22■□□□□ 0.03
DENND1A-206ENST00000473039 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
DENND1A-206ENST00000473039 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.02
DENND1A-206ENST00000473039 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.02
DENND1A-206ENST00000473039 LAS1LQ9Y4W2 734 aaKnown RBP15.2■□□□□ 0.02
DENND1A-206ENST00000473039 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
DENND1A-206ENST00000473039 ANP32BQ92688 251 aaKnown RBP15.19■□□□□ 0.02
DENND1A-206ENST00000473039 CUX2O14529 1486 aa15.19■□□□□ 0.02
DENND1A-206ENST00000473039 PPP1R15AO75807 674 aaPredicted RBP15.19■□□□□ 0.02
DENND1A-206ENST00000473039 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
DENND1A-206ENST00000473039 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
DENND1A-206ENST00000473039 HSP90AA1P07900 732 aaKnown RBP15.17■□□□□ 0.02
DENND1A-206ENST00000473039 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
DENND1A-206ENST00000473039 ARXQ96QS3 562 aa15.17■□□□□ 0.02
DENND1A-206ENST00000473039 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
DENND1A-206ENST00000473039 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
DENND1A-206ENST00000473039 TSPY4P0CV99 314 aa15.13■□□□□ 0.01
DENND1A-206ENST00000473039 TSPY10P0CW01 314 aa15.13■□□□□ 0.01
DENND1A-206ENST00000473039 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
DENND1A-206ENST00000473039 BECN1Q14457 450 aa15.12■□□□□ 0.01
DENND1A-206ENST00000473039 PLEKHD1A6NEE1 506 aa15.11■□□□□ 0.01
DENND1A-206ENST00000473039 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
DENND1A-206ENST00000473039 CARMIL1Q5VZK9 1371 aa15.1■□□□□ 0.01
DENND1A-206ENST00000473039 CARD11Q9BXL7 1154 aa15.09■□□□□ 0.01
DENND1A-206ENST00000473039 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
DENND1A-206ENST00000473039 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
DENND1A-206ENST00000473039 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
DENND1A-206ENST00000473039 RAPGEF2Q9Y4G8 1499 aa15.08■□□□□ 0
DENND1A-206ENST00000473039 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
DENND1A-206ENST00000473039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 01e-7■■□□□ 11.8
DENND1A-206ENST00000473039 ARHGAP35Q9NRY4 1499 aa15.05■□□□□ 0
DENND1A-206ENST00000473039 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
DENND1A-206ENST00000473039 IPO9Q96P70 1041 aaKnown RBP15.04■□□□□ -0
DENND1A-206ENST00000473039 CC2D2AQ9P2K1 1620 aa15.04■□□□□ -0
DENND1A-206ENST00000473039 CHGAP10645 457 aaKnown RBP15.03■□□□□ -0
DENND1A-206ENST00000473039 RGS3P49796 1198 aa15.01□□□□□ -0.01
DENND1A-206ENST00000473039 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
DENND1A-206ENST00000473039 RGL3Q3MIN7 710 aa14.99□□□□□ -0.01
DENND1A-206ENST00000473039 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
DENND1A-206ENST00000473039 NUDCQ9Y266 331 aa14.98□□□□□ -0.01
DENND1A-206ENST00000473039 TRIM44Q96DX7 344 aaPredicted RBP14.98□□□□□ -0.01
DENND1A-206ENST00000473039 KNSTRNQ9Y448 316 aa14.96□□□□□ -0.01
DENND1A-206ENST00000473039 RCAN3Q9UKA8 241 aa14.94□□□□□ -0.02
DENND1A-206ENST00000473039 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
DENND1A-206ENST00000473039 FOXD1Q16676 465 aa14.92□□□□□ -0.02
DENND1A-206ENST00000473039 MPHOSPH9Q99550 1183 aa14.92□□□□□ -0.02
DENND1A-206ENST00000473039 FMN1Q68DA7 1419 aa14.92□□□□□ -0.02
DENND1A-206ENST00000473039 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
DENND1A-206ENST00000473039 CDCA8Q53HL2 280 aa14.91□□□□□ -0.02
DENND1A-206ENST00000473039 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
DENND1A-206ENST00000473039 ARID4BQ4LE39 1312 aaPredicted RBP14.91□□□□□ -0.02
DENND1A-206ENST00000473039 CARMIL2Q6F5E8 1435 aa14.91□□□□□ -0.02
DENND1A-206ENST00000473039 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
DENND1A-206ENST00000473039 NAP1L5Q96NT1 182 aaPredicted RBP14.9□□□□□ -0.02
DENND1A-206ENST00000473039 PRKRIP1Q9H875 184 aaPredicted RBP14.9□□□□□ -0.02
DENND1A-206ENST00000473039 ZBED9Q6R2W3 1325 aa14.9□□□□□ -0.02
DENND1A-206ENST00000473039 NESP48681 1621 aa14.89□□□□□ -0.03
DENND1A-206ENST00000473039 GOLGA6L22H0YM25 854 aa14.88□□□□□ -0.03
DENND1A-206ENST00000473039 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
DENND1A-206ENST00000473039 DCAF11Q8TEB1 546 aa14.87□□□□□ -0.03
DENND1A-206ENST00000473039 RALBP1Q15311 655 aa14.86□□□□□ -0.03
DENND1A-206ENST00000473039 JPH4Q96JJ6 628 aa14.85□□□□□ -0.03
DENND1A-206ENST00000473039 L1TD1Q5T7N2 865 aaKnown RBP14.85□□□□□ -0.03
DENND1A-206ENST00000473039 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms