RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 FAM69CQ0P6D2 419 aa17.16■□□□□ 0.34
SUSD3-204ENST00000471462 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
SUSD3-204ENST00000471462 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
SUSD3-204ENST00000471462 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
SUSD3-204ENST00000471462 KDM4FA0A1W2PPD8 638 aa17.12■□□□□ 0.33
SUSD3-204ENST00000471462 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
SUSD3-204ENST00000471462 MAPKBP1O60336 1514 aa17.1■□□□□ 0.33
SUSD3-204ENST00000471462 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
SUSD3-204ENST00000471462 NPM1P06748 294 aaKnown RBP eCLIP17.08■□□□□ 0.32
SUSD3-204ENST00000471462 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
SUSD3-204ENST00000471462 RUSC2Q8N2Y8 1516 aa17.03■□□□□ 0.32
SUSD3-204ENST00000471462 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
SUSD3-204ENST00000471462 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
SUSD3-204ENST00000471462 KDM6BO15054 1643 aa17.02■□□□□ 0.31
SUSD3-204ENST00000471462 SUPT5HO00267 1087 aaKnown RBP16.94■□□□□ 0.3
SUSD3-204ENST00000471462 KIAA0586Q9BVV6 1533 aa16.93■□□□□ 0.3
SUSD3-204ENST00000471462 TSPOAP1O95153 1857 aa16.91■□□□□ 0.3
SUSD3-204ENST00000471462 IGF1RP08069 1367 aa16.86■□□□□ 0.29
SUSD3-204ENST00000471462 PTPRGP23470 1445 aa16.86■□□□□ 0.29
SUSD3-204ENST00000471462 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
SUSD3-204ENST00000471462 ABCC2Q92887 1545 aa16.82■□□□□ 0.28
SUSD3-204ENST00000471462 PPRC1Q5VV67 1664 aaKnown RBP16.81■□□□□ 0.28
SUSD3-204ENST00000471462 GLI2P10070 1586 aa16.81■□□□□ 0.28
SUSD3-204ENST00000471462 ASXL2Q76L83 1435 aa16.81■□□□□ 0.28
SUSD3-204ENST00000471462 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
SUSD3-204ENST00000471462 COL17A1Q9UMD9 1497 aaPredicted RBP16.79■□□□□ 0.28
SUSD3-204ENST00000471462 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
SUSD3-204ENST00000471462 TTBK1Q5TCY1 1321 aaPredicted RBP16.77■□□□□ 0.28
SUSD3-204ENST00000471462 CUL7Q14999 1698 aa16.77■□□□□ 0.28
SUSD3-204ENST00000471462 KIF27Q86VH2 1401 aa16.77■□□□□ 0.27
SUSD3-204ENST00000471462 UHRF1BP1LA0JNW5 1464 aa16.75■□□□□ 0.27
SUSD3-204ENST00000471462 CARMIL2Q6F5E8 1435 aa16.75■□□□□ 0.27
SUSD3-204ENST00000471462 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
SUSD3-204ENST00000471462 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
SUSD3-204ENST00000471462 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
SUSD3-204ENST00000471462 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
SUSD3-204ENST00000471462 MAP3K4Q9Y6R4 1608 aa16.69■□□□□ 0.26
SUSD3-204ENST00000471462 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
SUSD3-204ENST00000471462 IQGAP2Q13576 1575 aa16.67■□□□□ 0.26
SUSD3-204ENST00000471462 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
SUSD3-204ENST00000471462 DISP1Q96F81 1524 aa16.66■□□□□ 0.26
SUSD3-204ENST00000471462 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
SUSD3-204ENST00000471462 UGGT2Q9NYU1 1516 aa16.57■□□□□ 0.24
SUSD3-204ENST00000471462 WDR7Q9Y4E6 1490 aa16.56■□□□□ 0.24
SUSD3-204ENST00000471462 FBXO41Q8TF61 875 aa16.55■□□□□ 0.24
SUSD3-204ENST00000471462 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
SUSD3-204ENST00000471462 KIAA0556O60303 1618 aa16.52■□□□□ 0.24
SUSD3-204ENST00000471462 CD109Q6YHK3 1445 aa16.52■□□□□ 0.23
SUSD3-204ENST00000471462 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
SUSD3-204ENST00000471462 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
SUSD3-204ENST00000471462 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.23
SUSD3-204ENST00000471462 KIF21BO75037 1637 aa16.45■□□□□ 0.22
SUSD3-204ENST00000471462 MSH5O43196 834 aa16.43■□□□□ 0.22
SUSD3-204ENST00000471462 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
SUSD3-204ENST00000471462 ABCA8O94911 1581 aa16.43■□□□□ 0.22
SUSD3-204ENST00000471462 PTPRMP28827 1452 aa16.4■□□□□ 0.22
SUSD3-204ENST00000471462 GOLGA3Q08378 1498 aa16.38■□□□□ 0.21
SUSD3-204ENST00000471462 ADAMTSL3P82987 1691 aa16.37■□□□□ 0.21
SUSD3-204ENST00000471462 PHLDB1Q86UU1 1377 aa16.34■□□□□ 0.21
SUSD3-204ENST00000471462 CTTNBP2Q8WZ74 1663 aa16.32■□□□□ 0.2
SUSD3-204ENST00000471462 RAPGEF3O95398 923 aa16.31■□□□□ 0.2
SUSD3-204ENST00000471462 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
SUSD3-204ENST00000471462 ATP10BO94823 1461 aa16.3■□□□□ 0.2
SUSD3-204ENST00000471462 LMTK3Q96Q04 1460 aa16.3■□□□□ 0.2
SUSD3-204ENST00000471462 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
SUSD3-204ENST00000471462 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
SUSD3-204ENST00000471462 BCORL1Q5H9F3 1711 aa16.27■□□□□ 0.19
SUSD3-204ENST00000471462 NEO1Q92859 1461 aa16.26■□□□□ 0.19
SUSD3-204ENST00000471462 MADDQ8WXG6 1647 aa16.26■□□□□ 0.19
SUSD3-204ENST00000471462 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
SUSD3-204ENST00000471462 FRMPD1Q5SYB0 1578 aa16.24■□□□□ 0.19
SUSD3-204ENST00000471462 PRXQ9BXM0 1461 aa16.23■□□□□ 0.19
SUSD3-204ENST00000471462 P3H3Q8IVL6 736 aa16.21■□□□□ 0.19
SUSD3-204ENST00000471462 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
SUSD3-204ENST00000471462 HSPA2P54652 639 aa16.2■□□□□ 0.18
SUSD3-204ENST00000471462 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
SUSD3-204ENST00000471462 ARHGEF40Q8TER5 1519 aa16.16■□□□□ 0.18
SUSD3-204ENST00000471462 RIMS1Q86UR5 1692 aaKnown RBP16.16■□□□□ 0.18
SUSD3-204ENST00000471462 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
SUSD3-204ENST00000471462 FHOD3Q2V2M9 1422 aa16.13■□□□□ 0.17
SUSD3-204ENST00000471462 RAPGEF6Q8TEU7 1601 aa16.13■□□□□ 0.17
SUSD3-204ENST00000471462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
SUSD3-204ENST00000471462 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
SUSD3-204ENST00000471462 SAMD9Q5K651 1589 aa16.12■□□□□ 0.17
SUSD3-204ENST00000471462 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
SUSD3-204ENST00000471462 RICTORQ6R327 1708 aa16.11■□□□□ 0.17
SUSD3-204ENST00000471462 NUP153P49790 1475 aaKnown RBP16.11■□□□□ 0.17
SUSD3-204ENST00000471462 POGZQ7Z3K3 1410 aa16.11■□□□□ 0.17
SUSD3-204ENST00000471462 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
SUSD3-204ENST00000471462 FANCAO15360 1455 aa16.09■□□□□ 0.17
SUSD3-204ENST00000471462 ILDR2Q71H61 639 aa16.08■□□□□ 0.16
SUSD3-204ENST00000471462 ZMYM4Q5VZL5 1548 aa16.08■□□□□ 0.16
SUSD3-204ENST00000471462 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.16
SUSD3-204ENST00000471462 YEATS2Q9ULM3 1422 aa16.07■□□□□ 0.16
SUSD3-204ENST00000471462 PLEKHD1A6NEE1 506 aa16.06■□□□□ 0.16
SUSD3-204ENST00000471462 ZFYVE16Q7Z3T8 1539 aa16.05■□□□□ 0.16
SUSD3-204ENST00000471462 SOCS7O14512 581 aa16.05■□□□□ 0.16
SUSD3-204ENST00000471462 MAGI2Q86UL8 1455 aa16.04■□□□□ 0.16
SUSD3-204ENST00000471462 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
SUSD3-204ENST00000471462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms