RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 RIMBP3Q9UFD9 1639 aa15.16■□□□□ 0.02
LDHB-206ENST00000470985 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
LDHB-206ENST00000470985 FARP1Q9Y4F1 1045 aaPredicted RBP15.09■□□□□ 0.01
LDHB-206ENST00000470985 DCAF1Q9Y4B6 1507 aa15.07■□□□□ 0
LDHB-206ENST00000470985 KIF21AQ7Z4S6 1674 aa15.05■□□□□ -0
LDHB-206ENST00000470985 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
LDHB-206ENST00000470985 C19orf67A6NJJ6 358 aa15.03■□□□□ -0
LDHB-206ENST00000470985 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
LDHB-206ENST00000470985 FKBP8Q14318 412 aa15□□□□□ -0.01
LDHB-206ENST00000470985 ARHGEF11O15085 1522 aa15□□□□□ -0.01
LDHB-206ENST00000470985 PROM2Q8N271 834 aa14.99□□□□□ -0.01
LDHB-206ENST00000470985 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
LDHB-206ENST00000470985 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
LDHB-206ENST00000470985 CD44P16070 742 aaKnown RBP14.95□□□□□ -0.02
LDHB-206ENST00000470985 EVX2Q03828 476 aa14.95□□□□□ -0.02
LDHB-206ENST00000470985 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
LDHB-206ENST00000470985 CYB5RLQ6IPT4 315 aa14.93□□□□□ -0.02
LDHB-206ENST00000470985 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
LDHB-206ENST00000470985 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
LDHB-206ENST00000470985 WDR62O43379 1518 aa14.9□□□□□ -0.02
LDHB-206ENST00000470985 HMGXB3Q12766 1538 aa14.89□□□□□ -0.03
LDHB-206ENST00000470985 MIER1Q8N108 512 aa14.89□□□□□ -0.03
LDHB-206ENST00000470985 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
LDHB-206ENST00000470985 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
LDHB-206ENST00000470985 CLCN6P51797 869 aa14.85□□□□□ -0.03
LDHB-206ENST00000470985 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
LDHB-206ENST00000470985 ARAP1Q96P48 1450 aa14.81□□□□□ -0.04
LDHB-206ENST00000470985 ZRANB1Q9UGI0 708 aa14.8□□□□□ -0.04
LDHB-206ENST00000470985 FBXO3Q9UK99 471 aa14.79□□□□□ -0.04
LDHB-206ENST00000470985 GABBR2O75899 941 aa14.77□□□□□ -0.05
LDHB-206ENST00000470985 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
LDHB-206ENST00000470985 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
LDHB-206ENST00000470985 MNX1P50219 401 aaPredicted RBP14.69□□□□□ -0.06
LDHB-206ENST00000470985 ZNF579Q8NAF0 562 aaKnown RBP14.67□□□□□ -0.06
LDHB-206ENST00000470985 SMARCA4P51532 1647 aa14.62□□□□□ -0.07
LDHB-206ENST00000470985 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
LDHB-206ENST00000470985 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
LDHB-206ENST00000470985 TSPYL2Q9H2G4 693 aaPredicted RBP14.6□□□□□ -0.07
LDHB-206ENST00000470985 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
LDHB-206ENST00000470985 PHF12Q96QT6 1004 aa14.51□□□□□ -0.09
LDHB-206ENST00000470985 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
LDHB-206ENST00000470985 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
LDHB-206ENST00000470985 RSF1Q96T23 1441 aaPredicted RBP14.48□□□□□ -0.09
LDHB-206ENST00000470985 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.09
LDHB-206ENST00000470985 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.09
LDHB-206ENST00000470985 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
LDHB-206ENST00000470985 KDM4FA0A1W2PPD8 638 aa14.44□□□□□ -0.1
LDHB-206ENST00000470985 GALR2O43603 387 aaPredicted RBP14.43□□□□□ -0.1
LDHB-206ENST00000470985 FAM212AQ96EL1 285 aa14.43□□□□□ -0.1
LDHB-206ENST00000470985 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
LDHB-206ENST00000470985 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
LDHB-206ENST00000470985 CHD1O14646 1710 aa14.39□□□□□ -0.11
LDHB-206ENST00000470985 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
LDHB-206ENST00000470985 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
LDHB-206ENST00000470985 NUBP1P53384 320 aa14.34□□□□□ -0.11
LDHB-206ENST00000470985 LMTK3Q96Q04 1460 aa14.32□□□□□ -0.12
LDHB-206ENST00000470985 KIF12Q96FN5 646 aa14.32□□□□□ -0.12
LDHB-206ENST00000470985 MS4A3Q96HJ5 214 aa14.32□□□□□ -0.12
LDHB-206ENST00000470985 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
LDHB-206ENST00000470985 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
LDHB-206ENST00000470985 POTEIP0CG38 1075 aa14.31□□□□□ -0.12
LDHB-206ENST00000470985 LHX8Q68G74 356 aa14.29□□□□□ -0.12
LDHB-206ENST00000470985 FBXO41Q8TF61 875 aa14.28□□□□□ -0.12
LDHB-206ENST00000470985 MAP3K13O43283 966 aa14.26□□□□□ -0.13
LDHB-206ENST00000470985 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
LDHB-206ENST00000470985 GSE1Q14687 1217 aa14.25□□□□□ -0.13
LDHB-206ENST00000470985 SGIP1Q9BQI5 828 aa14.25□□□□□ -0.13
LDHB-206ENST00000470985 PCDHB13Q9Y5F0 798 aa14.24□□□□□ -0.13
LDHB-206ENST00000470985 CLASP1Q7Z460 1538 aa14.24□□□□□ -0.13
LDHB-206ENST00000470985 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
LDHB-206ENST00000470985 HECW2Q9P2P5 1572 aa14.22□□□□□ -0.13
LDHB-206ENST00000470985 SOCS7O14512 581 aa14.22□□□□□ -0.13
LDHB-206ENST00000470985 ILDR2Q71H61 639 aa14.21□□□□□ -0.13
LDHB-206ENST00000470985 CFTRP13569 1480 aa14.2□□□□□ -0.14
LDHB-206ENST00000470985 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.142e-6■■■□□ 15.2
LDHB-206ENST00000470985 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
LDHB-206ENST00000470985 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
LDHB-206ENST00000470985 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
LDHB-206ENST00000470985 ATMINO43313 823 aaPredicted RBP14.16□□□□□ -0.14
LDHB-206ENST00000470985 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
LDHB-206ENST00000470985 C7P10643 843 aa14.15□□□□□ -0.14
LDHB-206ENST00000470985 TIE1P35590 1138 aa14.14□□□□□ -0.15
LDHB-206ENST00000470985 PYGBP11216 843 aa14.13□□□□□ -0.15
LDHB-206ENST00000470985 KIF13AQ9H1H9 1805 aa14.13□□□□□ -0.15
LDHB-206ENST00000470985 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
LDHB-206ENST00000470985 CIZ1Q9ULV3 898 aaPredicted RBP14.1□□□□□ -0.15
LDHB-206ENST00000470985 METRNQ9UJH8 293 aa14.08□□□□□ -0.16
LDHB-206ENST00000470985 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
LDHB-206ENST00000470985 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
LDHB-206ENST00000470985 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
LDHB-206ENST00000470985 IFNL1Q8IU54 200 aa14.06□□□□□ -0.16
LDHB-206ENST00000470985 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
LDHB-206ENST00000470985 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
LDHB-206ENST00000470985 SYNJ2O15056 1496 aa14.05□□□□□ -0.16
LDHB-206ENST00000470985 ADGRL1O94910 1474 aa14.04□□□□□ -0.16
LDHB-206ENST00000470985 SEC24BO95487 1268 aa14.03□□□□□ -0.16
LDHB-206ENST00000470985 ZNF467Q7Z7K2 595 aaPredicted RBP14.03□□□□□ -0.16
LDHB-206ENST00000470985 TARBP1Q13395 1621 aaKnown RBP14.02□□□□□ -0.16
LDHB-206ENST00000470985 TTLL13PA6NNM8 815 aa14.02□□□□□ -0.17
LDHB-206ENST00000470985 TMEM106CQ9BVX2 250 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms