RNA–Protein interactions for RNA: ENST00000470950.1

LDLRAP1-203, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-203ENST00000470950 ABCC10Q5T3U5 1492 aa24.32■■□□□ 1.48
LDLRAP1-203ENST00000470950 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
LDLRAP1-203ENST00000470950 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
LDLRAP1-203ENST00000470950 MAPKBP1O60336 1514 aa24.25■■□□□ 1.47
LDLRAP1-203ENST00000470950 RUSC2Q8N2Y8 1516 aa24.22■■□□□ 1.47
LDLRAP1-203ENST00000470950 DIP2BQ9P265 1576 aa24.2■■□□□ 1.47
LDLRAP1-203ENST00000470950 ADCY10Q96PN6 1610 aa24.17■■□□□ 1.46
LDLRAP1-203ENST00000470950 KDM4FA0A1W2PPD8 638 aa24.16■■□□□ 1.46
LDLRAP1-203ENST00000470950 KDM6BO15054 1643 aa24.13■■□□□ 1.45
LDLRAP1-203ENST00000470950 KIAA0586Q9BVV6 1533 aa24.08■■□□□ 1.45
LDLRAP1-203ENST00000470950 TSPOAP1O95153 1857 aa24.05■■□□□ 1.44
LDLRAP1-203ENST00000470950 IGF1RP08069 1367 aa24■■□□□ 1.43
LDLRAP1-203ENST00000470950 PTPRGP23470 1445 aa23.96■■□□□ 1.43
LDLRAP1-203ENST00000470950 ILDR1Q86SU0 546 aaPredicted RBP23.95■■□□□ 1.42
LDLRAP1-203ENST00000470950 CUL7Q14999 1698 aa23.92■■□□□ 1.42
LDLRAP1-203ENST00000470950 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
LDLRAP1-203ENST00000470950 TTBK1Q5TCY1 1321 aaPredicted RBP23.91■■□□□ 1.42
LDLRAP1-203ENST00000470950 ABCC2Q92887 1545 aa23.89■■□□□ 1.41
LDLRAP1-203ENST00000470950 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
LDLRAP1-203ENST00000470950 ASXL2Q76L83 1435 aa23.86■■□□□ 1.41
LDLRAP1-203ENST00000470950 PLB1Q6P1J6 1458 aa23.86■■□□□ 1.41
LDLRAP1-203ENST00000470950 CARMIL2Q6F5E8 1435 aa23.85■■□□□ 1.41
LDLRAP1-203ENST00000470950 GLI2P10070 1586 aa23.85■■□□□ 1.41
LDLRAP1-203ENST00000470950 PPRC1Q5VV67 1664 aaKnown RBP23.83■■□□□ 1.41
LDLRAP1-203ENST00000470950 ADGRL1O94910 1474 aa23.82■■□□□ 1.4
LDLRAP1-203ENST00000470950 CARMIL1Q5VZK9 1371 aa23.82■■□□□ 1.4
LDLRAP1-203ENST00000470950 UHRF1BP1LA0JNW5 1464 aa23.79■■□□□ 1.4
LDLRAP1-203ENST00000470950 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
LDLRAP1-203ENST00000470950 COL17A1Q9UMD9 1497 aaPredicted RBP23.75■■□□□ 1.39
LDLRAP1-203ENST00000470950 IQGAP2Q13576 1575 aa23.74■■□□□ 1.39
LDLRAP1-203ENST00000470950 EPRSP07814 1512 aaKnown RBP23.72■■□□□ 1.39
LDLRAP1-203ENST00000470950 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
LDLRAP1-203ENST00000470950 KDM5BQ9UGL1 1544 aa23.69■■□□□ 1.38
LDLRAP1-203ENST00000470950 MAP3K4Q9Y6R4 1608 aa23.68■■□□□ 1.38
LDLRAP1-203ENST00000470950 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
LDLRAP1-203ENST00000470950 HECW2Q9P2P5 1572 aa23.65■■□□□ 1.38
LDLRAP1-203ENST00000470950 ZCCHC11Q5TAX3 1644 aaKnown RBP23.61■■□□□ 1.37
LDLRAP1-203ENST00000470950 UGGT2Q9NYU1 1516 aa23.59■■□□□ 1.37
LDLRAP1-203ENST00000470950 KIAA0556O60303 1618 aa23.54■■□□□ 1.36
LDLRAP1-203ENST00000470950 WDR7Q9Y4E6 1490 aa23.54■■□□□ 1.36
LDLRAP1-203ENST00000470950 RAPGEF2Q9Y4G8 1499 aa23.53■■□□□ 1.36
LDLRAP1-203ENST00000470950 CD109Q6YHK3 1445 aa23.47■■□□□ 1.35
LDLRAP1-203ENST00000470950 MAGI3Q5TCQ9 1506 aa23.47■■□□□ 1.35
LDLRAP1-203ENST00000470950 KCNH8Q96L42 1107 aa23.44■■□□□ 1.34
LDLRAP1-203ENST00000470950 CFAP43Q8NDM7 1665 aa23.42■■□□□ 1.34
LDLRAP1-203ENST00000470950 ABCA8O94911 1581 aa23.37■■□□□ 1.33
LDLRAP1-203ENST00000470950 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
LDLRAP1-203ENST00000470950 KIF21BO75037 1637 aa23.34■■□□□ 1.33
LDLRAP1-203ENST00000470950 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
LDLRAP1-203ENST00000470950 FBXO41Q8TF61 875 aa23.32■■□□□ 1.32
LDLRAP1-203ENST00000470950 ARAP3Q8WWN8 1544 aa23.29■■□□□ 1.32
LDLRAP1-203ENST00000470950 ARID3CA6NKF2 412 aa23.22■■□□□ 1.31
LDLRAP1-203ENST00000470950 PTPRMP28827 1452 aa23.22■■□□□ 1.31
LDLRAP1-203ENST00000470950 PHLDB1Q86UU1 1377 aa23.2■■□□□ 1.3
LDLRAP1-203ENST00000470950 ADAMTSL3P82987 1691 aa23.19■■□□□ 1.3
LDLRAP1-203ENST00000470950 ATP10BO94823 1461 aa23.19■■□□□ 1.3
LDLRAP1-203ENST00000470950 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
LDLRAP1-203ENST00000470950 RAPGEF3O95398 923 aa23.16■■□□□ 1.3
LDLRAP1-203ENST00000470950 PRXQ9BXM0 1461 aa23.16■■□□□ 1.3
LDLRAP1-203ENST00000470950 ABCA9Q8IUA7 1624 aa23.15■■□□□ 1.3
LDLRAP1-203ENST00000470950 P3H3Q8IVL6 736 aa23.14■■□□□ 1.29
LDLRAP1-203ENST00000470950 NEO1Q92859 1461 aa23.11■■□□□ 1.29
LDLRAP1-203ENST00000470950 ARID4BQ4LE39 1312 aaPredicted RBP23.08■■□□□ 1.29
LDLRAP1-203ENST00000470950 BCORL1Q5H9F3 1711 aa23.08■■□□□ 1.29
LDLRAP1-203ENST00000470950 PCF11O94913 1555 aaKnown RBP23.08■■□□□ 1.29
LDLRAP1-203ENST00000470950 MADDQ8WXG6 1647 aa23.06■■□□□ 1.28
LDLRAP1-203ENST00000470950 FRMPD1Q5SYB0 1578 aa23.06■■□□□ 1.28
LDLRAP1-203ENST00000470950 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
LDLRAP1-203ENST00000470950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
LDLRAP1-203ENST00000470950 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
LDLRAP1-203ENST00000470950 RAPGEF6Q8TEU7 1601 aa23■■□□□ 1.27
LDLRAP1-203ENST00000470950 SAMD9Q5K651 1589 aa22.98■■□□□ 1.27
LDLRAP1-203ENST00000470950 ARHGEF40Q8TER5 1519 aa22.96■■□□□ 1.27
LDLRAP1-203ENST00000470950 RIMS1Q86UR5 1692 aaKnown RBP22.96■■□□□ 1.27
LDLRAP1-203ENST00000470950 DENND4BO75064 1496 aaPredicted RBP22.95■■□□□ 1.26
LDLRAP1-203ENST00000470950 NUP153P49790 1475 aaKnown RBP22.94■■□□□ 1.26
LDLRAP1-203ENST00000470950 HSPA2P54652 639 aa22.94■■□□□ 1.26
LDLRAP1-203ENST00000470950 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
LDLRAP1-203ENST00000470950 AKNAQ7Z591 1439 aa22.91■■□□□ 1.26
LDLRAP1-203ENST00000470950 RICTORQ6R327 1708 aa22.91■■□□□ 1.26
LDLRAP1-203ENST00000470950 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
LDLRAP1-203ENST00000470950 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
LDLRAP1-203ENST00000470950 POGZQ7Z3K3 1410 aa22.89■■□□□ 1.25
LDLRAP1-203ENST00000470950 FANCAO15360 1455 aa22.87■■□□□ 1.25
LDLRAP1-203ENST00000470950 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
LDLRAP1-203ENST00000470950 CERKQ8TCT0 537 aa22.85■■□□□ 1.25
LDLRAP1-203ENST00000470950 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
LDLRAP1-203ENST00000470950 ZMYM4Q5VZL5 1548 aa22.83■■□□□ 1.25
LDLRAP1-203ENST00000470950 RANGAP1P46060 587 aaPredicted RBP22.83■■□□□ 1.25
LDLRAP1-203ENST00000470950 YEATS2Q9ULM3 1422 aa22.82■■□□□ 1.24
LDLRAP1-203ENST00000470950 ZFYVE16Q7Z3T8 1539 aa22.82■■□□□ 1.24
LDLRAP1-203ENST00000470950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.82■■□□□ 1.24
LDLRAP1-203ENST00000470950 SIGLEC1Q9BZZ2 1709 aa22.81■■□□□ 1.24
LDLRAP1-203ENST00000470950 EFCAB5A4FU69 1503 aa22.81■■□□□ 1.24
LDLRAP1-203ENST00000470950 MLECQ14165 292 aa22.8■■□□□ 1.24
LDLRAP1-203ENST00000470950 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
LDLRAP1-203ENST00000470950 TTC37Q6PGP7 1564 aa22.77■■□□□ 1.24
LDLRAP1-203ENST00000470950 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
LDLRAP1-203ENST00000470950 FER1L4A9Z1Z3 1794 aa22.73■■□□□ 1.23
LDLRAP1-203ENST00000470950 SCAPERQ9BY12 1400 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms