RNA–Protein interactions for RNA: ENST00000470589.1

GABRR3-201, Transcript of gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene), humanhuman

TSL 1 (best)

Gene GABRR3, Length 4,826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR3-201ENST00000470589 P3H3Q8IVL6 736 aa5.35□□□□□ -1.55
GABRR3-201ENST00000470589 CCDC136Q96JN2 1154 aa5.35□□□□□ -1.55
GABRR3-201ENST00000470589 CDCA8Q53HL2 280 aa5.34□□□□□ -1.55
GABRR3-201ENST00000470589 FBLN2P98095 1184 aa5.34□□□□□ -1.55
GABRR3-201ENST00000470589 WDR43Q15061 677 aaKnown RBP eCLIP5.33□□□□□ -1.56
GABRR3-201ENST00000470589 MRS2Q9HD23 443 aa5.33□□□□□ -1.56
GABRR3-201ENST00000470589 ZNF777Q9ULD5 760 aaPredicted RBP5.33□□□□□ -1.56
GABRR3-201ENST00000470589 SCAF1Q9H7N4 1312 aaKnown RBP5.33□□□□□ -1.56
GABRR3-201ENST00000470589 ERICH6BQ5W0A0 696 aa5.33□□□□□ -1.56
GABRR3-201ENST00000470589 MIER1Q8N108 512 aa5.32□□□□□ -1.56
GABRR3-201ENST00000470589 SMARCA2P51531 1590 aa5.32□□□□□ -1.56
GABRR3-201ENST00000470589 VPS8Q8N3P4 1428 aa5.32□□□□□ -1.56
GABRR3-201ENST00000470589 CCER2I3L3R5 266 aa5.31□□□□□ -1.56
GABRR3-201ENST00000470589 BECN1Q14457 450 aa5.31□□□□□ -1.56
GABRR3-201ENST00000470589 FAM9BQ8IZU0 186 aa5.31□□□□□ -1.56
GABRR3-201ENST00000470589 HSP90AA1P07900 732 aaKnown RBP5.31□□□□□ -1.56
GABRR3-201ENST00000470589 ADRA2BP18089 450 aa5.31□□□□□ -1.56
GABRR3-201ENST00000470589 CCNB3Q8WWL7 1395 aa5.31□□□□□ -1.56
GABRR3-201ENST00000470589 NPM1P06748 294 aaKnown RBP eCLIP5.3□□□□□ -1.56
GABRR3-201ENST00000470589 TOP2AP11388 1531 aaKnown RBP5.3□□□□□ -1.56
GABRR3-201ENST00000470589 PPM1GO15355 546 aaPredicted RBP5.29□□□□□ -1.56
GABRR3-201ENST00000470589 NPM2Q86SE8 214 aaKnown RBP5.28□□□□□ -1.56
GABRR3-201ENST00000470589 CHMP4BQ9H444 224 aaKnown RBP5.28□□□□□ -1.56
GABRR3-201ENST00000470589 ESF1Q9H501 851 aaKnown RBP5.28□□□□□ -1.56
GABRR3-201ENST00000470589 PPP4R2Q9NY27 417 aa5.28□□□□□ -1.56
GABRR3-201ENST00000470589 PLEKHD1A6NEE1 506 aa5.28□□□□□ -1.56
GABRR3-201ENST00000470589 MYH16Q9H6N6 1097 aa5.28□□□□□ -1.56
GABRR3-201ENST00000470589 ARID4BQ4LE39 1312 aaPredicted RBP5.28□□□□□ -1.56
GABRR3-201ENST00000470589 MS4A1P11836 297 aa5.27□□□□□ -1.57
GABRR3-201ENST00000470589 SETD5Q9C0A6 1442 aa5.27□□□□□ -1.57
GABRR3-201ENST00000470589 ARHGAP35Q9NRY4 1499 aa5.27□□□□□ -1.57
GABRR3-201ENST00000470589 CHMP7Q8WUX9 453 aaPredicted RBP5.26□□□□□ -1.57
GABRR3-201ENST00000470589 CFAP53Q96M91 514 aa5.26□□□□□ -1.57
GABRR3-201ENST00000470589 FMN1Q68DA7 1419 aa5.26□□□□□ -1.57
GABRR3-201ENST00000470589 GOLGA6L22H0YM25 854 aa5.26□□□□□ -1.57
GABRR3-201ENST00000470589 ARXQ96QS3 562 aa5.26□□□□□ -1.57
GABRR3-201ENST00000470589 CFAP44Q96MT7 982 aa5.26□□□□□ -1.57
GABRR3-201ENST00000470589 CHIC2Q9UKJ5 165 aa5.26□□□□□ -1.57
GABRR3-201ENST00000470589 STAG3Q9UJ98 1225 aa5.25□□□□□ -1.57
GABRR3-201ENST00000470589 CARMIL1Q5VZK9 1371 aa5.25□□□□□ -1.57
GABRR3-201ENST00000470589 CCDC88BA6NC98 1476 aa5.25□□□□□ -1.57
GABRR3-201ENST00000470589 PPP4R3CPQ6ZMV5 832 aa5.25□□□□□ -1.57
GABRR3-201ENST00000470589 MROH2BQ7Z745 1585 aa5.25□□□□□ -1.57
GABRR3-201ENST00000470589 CECR2Q9BXF3 1484 aa5.24□□□□□ -1.57
GABRR3-201ENST00000470589 CFDP1Q9UEE9 299 aaPredicted RBP5.24□□□□□ -1.57
GABRR3-201ENST00000470589 PNNQ9H307 717 aaKnown RBP5.24□□□□□ -1.57
GABRR3-201ENST00000470589 ARID3CA6NKF2 412 aa5.23□□□□□ -1.57
GABRR3-201ENST00000470589 KNSTRNQ9Y448 316 aa5.23□□□□□ -1.57
GABRR3-201ENST00000470589 CUX2O14529 1486 aa5.23□□□□□ -1.57
GABRR3-201ENST00000470589 RRP7BPQ9NSQ0 103 aa5.22□□□□□ -1.57
GABRR3-201ENST00000470589 CHGAP10645 457 aaKnown RBP5.22□□□□□ -1.57
GABRR3-201ENST00000470589 NCLP19338 710 aaKnown RBP5.22□□□□□ -1.57
GABRR3-201ENST00000470589 CASC1Q6TDU7 716 aa5.22□□□□□ -1.57
GABRR3-201ENST00000470589 CARD11Q9BXL7 1154 aa5.22□□□□□ -1.57
GABRR3-201ENST00000470589 SOGA1O94964 1423 aa5.22□□□□□ -1.57
GABRR3-201ENST00000470589 ROCK2O75116 1388 aaKnown RBP5.21□□□□□ -1.57
GABRR3-201ENST00000470589 HAP1P54257 671 aaPredicted RBP5.21□□□□□ -1.58
GABRR3-201ENST00000470589 TRIM44Q96DX7 344 aaPredicted RBP5.21□□□□□ -1.58
GABRR3-201ENST00000470589 SUPT16HQ9Y5B9 1047 aaKnown RBP5.21□□□□□ -1.58
GABRR3-201ENST00000470589 PTMSP20962 102 aa5.21□□□□□ -1.58
GABRR3-201ENST00000470589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.21□□□□□ -1.58
GABRR3-201ENST00000470589 NUDCQ9Y266 331 aa5.21□□□□□ -1.58
GABRR3-201ENST00000470589 KDM2AQ9Y2K7 1162 aa5.21□□□□□ -1.58
GABRR3-201ENST00000470589 KANK1Q14678 1352 aa5.2□□□□□ -1.58
GABRR3-201ENST00000470589 NOP58Q9Y2X3 529 aaKnown RBP5.2□□□□□ -1.58
GABRR3-201ENST00000470589 ABCC8Q09428 1581 aa5.2□□□□□ -1.58
GABRR3-201ENST00000470589 PHLDB1Q86UU1 1377 aa5.2□□□□□ -1.58
GABRR3-201ENST00000470589 CARMIL2Q6F5E8 1435 aa5.2□□□□□ -1.58
GABRR3-201ENST00000470589 TMF1P82094 1093 aa5.2□□□□□ -1.58
GABRR3-201ENST00000470589 NBR1Q14596 966 aa5.2□□□□□ -1.58
GABRR3-201ENST00000470589 SMARCA4P51532 1647 aa5.19□□□□□ -1.58
GABRR3-201ENST00000470589 PDS5BQ9NTI5 1447 aa5.19□□□□□ -1.58
GABRR3-201ENST00000470589 RAPGEF2Q9Y4G8 1499 aa5.19□□□□□ -1.58
GABRR3-201ENST00000470589 RALBP1Q15311 655 aa5.19□□□□□ -1.58
GABRR3-201ENST00000470589 RSPH4AQ5TD94 716 aa5.18□□□□□ -1.58
GABRR3-201ENST00000470589 WIZO95785 1651 aa5.18□□□□□ -1.58
GABRR3-201ENST00000470589 L1TD1Q5T7N2 865 aaKnown RBP5.18□□□□□ -1.58
GABRR3-201ENST00000470589 MAPK8IP3Q9UPT6 1336 aa5.17□□□□□ -1.58
GABRR3-201ENST00000470589 PDE3BQ13370 1112 aa5.17□□□□□ -1.58
GABRR3-201ENST00000470589 FTSJ3Q8IY81 847 aaKnown RBP5.17□□□□□ -1.58
GABRR3-201ENST00000470589 KTN1Q86UP2 1357 aaKnown RBP5.17□□□□□ -1.58
GABRR3-201ENST00000470589 CCDC18Q5T9S5 1454 aa5.17□□□□□ -1.58
GABRR3-201ENST00000470589 RAB3GAP2Q9H2M9 1393 aa5.17□□□□□ -1.58
GABRR3-201ENST00000470589 TNNT2P45379 298 aaPredicted RBP5.17□□□□□ -1.58
GABRR3-201ENST00000470589 SALL2Q9Y467 1007 aaPredicted RBP5.17□□□□□ -1.58
GABRR3-201ENST00000470589 ANKRD30AQ9BXX3 1397 aa5.17□□□□□ -1.58
GABRR3-201ENST00000470589 TCERG1O14776 1098 aaKnown RBP5.17□□□□□ -1.58
GABRR3-201ENST00000470589 EIF3AQ14152 1382 aaKnown RBP5.17□□□□□ -1.58
GABRR3-201ENST00000470589 CHMP4AQ9BY43 222 aa5.16□□□□□ -1.58
GABRR3-201ENST00000470589 EIF4G1Q04637 1599 aaKnown RBP5.15□□□□□ -1.58
GABRR3-201ENST00000470589 CALD1Q05682 793 aaKnown RBP5.15□□□□□ -1.58
GABRR3-201ENST00000470589 PPP1R15AO75807 674 aaPredicted RBP5.15□□□□□ -1.59
GABRR3-201ENST00000470589 HDGFP51858 240 aaKnown RBP5.14□□□□□ -1.59
GABRR3-201ENST00000470589 IRX6P78412 446 aaPredicted RBP5.14□□□□□ -1.59
GABRR3-201ENST00000470589 SIN3AQ96ST3 1273 aa5.14□□□□□ -1.59
GABRR3-201ENST00000470589 NGEFQ8N5V2 710 aa5.14□□□□□ -1.59
GABRR3-201ENST00000470589 ERCC6Q03468 1493 aa5.14□□□□□ -1.59
GABRR3-201ENST00000470589 CUX1P39880 1505 aa5.14□□□□□ -1.59
GABRR3-201ENST00000470589 KIF21BO75037 1637 aa5.14□□□□□ -1.59
GABRR3-201ENST00000470589 HSPA5P11021 654 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms