RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
HIGD1A-205ENST00000470543 NPM1P06748 294 aaKnown RBP eCLIP22.44■■□□□ 1.18
HIGD1A-205ENST00000470543 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
HIGD1A-205ENST00000470543 FAM69CQ0P6D2 419 aa22.42■■□□□ 1.18
HIGD1A-205ENST00000470543 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
HIGD1A-205ENST00000470543 MAPKBP1O60336 1514 aa22.4■■□□□ 1.18
HIGD1A-205ENST00000470543 DIP2BQ9P265 1576 aa22.39■■□□□ 1.18
HIGD1A-205ENST00000470543 KDM6BO15054 1643 aa22.35■■□□□ 1.17
HIGD1A-205ENST00000470543 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
HIGD1A-205ENST00000470543 TSPOAP1O95153 1857 aa22.33■■□□□ 1.17
HIGD1A-205ENST00000470543 CUL7Q14999 1698 aa22.23■■□□□ 1.15
HIGD1A-205ENST00000470543 KIAA0586Q9BVV6 1533 aa22.23■■□□□ 1.15
HIGD1A-205ENST00000470543 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
HIGD1A-205ENST00000470543 KDM4FA0A1W2PPD8 638 aa22.15■■□□□ 1.14
HIGD1A-205ENST00000470543 KIF27Q86VH2 1401 aa22.14■■□□□ 1.14
HIGD1A-205ENST00000470543 PTPRGP23470 1445 aa22.12■■□□□ 1.13
HIGD1A-205ENST00000470543 CARMIL2Q6F5E8 1435 aa22.09■■□□□ 1.13
HIGD1A-205ENST00000470543 IGF1RP08069 1367 aa22.09■■□□□ 1.13
HIGD1A-205ENST00000470543 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
HIGD1A-205ENST00000470543 TNIKQ9UKE5 1360 aa22.05■■□□□ 1.12
HIGD1A-205ENST00000470543 PLB1Q6P1J6 1458 aa22.04■■□□□ 1.12
HIGD1A-205ENST00000470543 ASXL2Q76L83 1435 aa22.04■■□□□ 1.12
HIGD1A-205ENST00000470543 PPRC1Q5VV67 1664 aaKnown RBP22.03■■□□□ 1.12
HIGD1A-205ENST00000470543 IQGAP2Q13576 1575 aa22.03■■□□□ 1.12
HIGD1A-205ENST00000470543 GLI2P10070 1586 aa22.02■■□□□ 1.12
HIGD1A-205ENST00000470543 ADGRL1O94910 1474 aa22■■□□□ 1.11
HIGD1A-205ENST00000470543 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
HIGD1A-205ENST00000470543 ILDR1Q86SU0 546 aaPredicted RBP21.96■■□□□ 1.11
HIGD1A-205ENST00000470543 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
HIGD1A-205ENST00000470543 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
HIGD1A-205ENST00000470543 TEX14Q8IWB6 1497 aa21.92■■□□□ 1.1
HIGD1A-205ENST00000470543 MAP3K4Q9Y6R4 1608 aa21.91■■□□□ 1.1
HIGD1A-205ENST00000470543 EPRSP07814 1512 aaKnown RBP21.9■■□□□ 1.1
HIGD1A-205ENST00000470543 ZCCHC11Q5TAX3 1644 aaKnown RBP21.89■■□□□ 1.09
HIGD1A-205ENST00000470543 DISP1Q96F81 1524 aa21.86■■□□□ 1.09
HIGD1A-205ENST00000470543 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
HIGD1A-205ENST00000470543 HECW2Q9P2P5 1572 aa21.85■■□□□ 1.09
HIGD1A-205ENST00000470543 KIAA0556O60303 1618 aa21.83■■□□□ 1.08
HIGD1A-205ENST00000470543 COL17A1Q9UMD9 1497 aaPredicted RBP21.82■■□□□ 1.08
HIGD1A-205ENST00000470543 UGGT2Q9NYU1 1516 aa21.81■■□□□ 1.08
HIGD1A-205ENST00000470543 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
HIGD1A-205ENST00000470543 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.08
HIGD1A-205ENST00000470543 CTTNBP2Q8WZ74 1663 aa21.73■■□□□ 1.07
HIGD1A-205ENST00000470543 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
HIGD1A-205ENST00000470543 CD109Q6YHK3 1445 aa21.67■■□□□ 1.06
HIGD1A-205ENST00000470543 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
HIGD1A-205ENST00000470543 MAGI3Q5TCQ9 1506 aa21.65■■□□□ 1.06
HIGD1A-205ENST00000470543 KIF21BO75037 1637 aa21.65■■□□□ 1.06
HIGD1A-205ENST00000470543 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
HIGD1A-205ENST00000470543 ABCA8O94911 1581 aa21.61■■□□□ 1.05
HIGD1A-205ENST00000470543 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
HIGD1A-205ENST00000470543 ARAP3Q8WWN8 1544 aa21.49■■□□□ 1.03
HIGD1A-205ENST00000470543 ARID3CA6NKF2 412 aa21.48■■□□□ 1.03
HIGD1A-205ENST00000470543 FBXO41Q8TF61 875 aa21.44■■□□□ 1.02
HIGD1A-205ENST00000470543 ABCA9Q8IUA7 1624 aa21.44■■□□□ 1.02
HIGD1A-205ENST00000470543 PTPRMP28827 1452 aa21.42■■□□□ 1.02
HIGD1A-205ENST00000470543 ADAMTSL3P82987 1691 aa21.42■■□□□ 1.02
HIGD1A-205ENST00000470543 PHLDB1Q86UU1 1377 aa21.4■■□□□ 1.02
HIGD1A-205ENST00000470543 PRXQ9BXM0 1461 aa21.39■■□□□ 1.02
HIGD1A-205ENST00000470543 ATP10BO94823 1461 aa21.39■■□□□ 1.01
HIGD1A-205ENST00000470543 P3H3Q8IVL6 736 aa21.38■■□□□ 1.01
HIGD1A-205ENST00000470543 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
HIGD1A-205ENST00000470543 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
HIGD1A-205ENST00000470543 NEO1Q92859 1461 aa21.36■■□□□ 1.01
HIGD1A-205ENST00000470543 RAPGEF6Q8TEU7 1601 aa21.36■■□□□ 1.01
HIGD1A-205ENST00000470543 MADDQ8WXG6 1647 aa21.36■■□□□ 1.01
HIGD1A-205ENST00000470543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
HIGD1A-205ENST00000470543 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
HIGD1A-205ENST00000470543 PCF11O94913 1555 aaKnown RBP21.35■■□□□ 1.01
HIGD1A-205ENST00000470543 RAPGEF3O95398 923 aa21.34■■□□□ 1.01
HIGD1A-205ENST00000470543 FRMPD1Q5SYB0 1578 aa21.31■■□□□ 1
HIGD1A-205ENST00000470543 SAMD9Q5K651 1589 aa21.31■■□□□ 1
HIGD1A-205ENST00000470543 RIMS1Q86UR5 1692 aaKnown RBP21.31■■□□□ 1
HIGD1A-205ENST00000470543 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
HIGD1A-205ENST00000470543 LMTK3Q96Q04 1460 aa21.26■□□□□ 0.99
HIGD1A-205ENST00000470543 CFAP74Q9C0B2 1584 aa21.25■□□□□ 0.99
HIGD1A-205ENST00000470543 DENND4BO75064 1496 aaPredicted RBP21.22■□□□□ 0.99
HIGD1A-205ENST00000470543 RICTORQ6R327 1708 aa21.22■□□□□ 0.99
HIGD1A-205ENST00000470543 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
HIGD1A-205ENST00000470543 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
HIGD1A-205ENST00000470543 POGZQ7Z3K3 1410 aa21.2■□□□□ 0.98
HIGD1A-205ENST00000470543 FANCAO15360 1455 aa21.2■□□□□ 0.98
HIGD1A-205ENST00000470543 RANGAP1P46060 587 aaPredicted RBP21.18■□□□□ 0.98
HIGD1A-205ENST00000470543 AKNAQ7Z591 1439 aa21.17■□□□□ 0.98
HIGD1A-205ENST00000470543 EFCAB5A4FU69 1503 aa21.15■□□□□ 0.98
HIGD1A-205ENST00000470543 ZFYVE16Q7Z3T8 1539 aa21.15■□□□□ 0.98
HIGD1A-205ENST00000470543 FHOD3Q2V2M9 1422 aa21.15■□□□□ 0.98
HIGD1A-205ENST00000470543 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.97
HIGD1A-205ENST00000470543 FER1L4A9Z1Z3 1794 aa21.14■□□□□ 0.97
HIGD1A-205ENST00000470543 HSPA2P54652 639 aa21.13■□□□□ 0.97
HIGD1A-205ENST00000470543 ZMYM4Q5VZL5 1548 aa21.13■□□□□ 0.97
HIGD1A-205ENST00000470543 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
HIGD1A-205ENST00000470543 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
HIGD1A-205ENST00000470543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.11■□□□□ 0.97
HIGD1A-205ENST00000470543 MLECQ14165 292 aa21.07■□□□□ 0.96
HIGD1A-205ENST00000470543 SIGLEC1Q9BZZ2 1709 aa21.07■□□□□ 0.96
HIGD1A-205ENST00000470543 YEATS2Q9ULM3 1422 aa21.06■□□□□ 0.96
HIGD1A-205ENST00000470543 MAGI2Q86UL8 1455 aa21.06■□□□□ 0.96
HIGD1A-205ENST00000470543 HECW1Q76N89 1606 aa21.05■□□□□ 0.96
HIGD1A-205ENST00000470543 CERKQ8TCT0 537 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1730 ms