RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
UBE3C-205ENST00000470408 TOP2AP11388 1531 aaKnown RBP12.91□□□□□ -0.34
UBE3C-205ENST00000470408 PPP1R15AO75807 674 aaPredicted RBP12.9□□□□□ -0.34
UBE3C-205ENST00000470408 SOGA1O94964 1423 aa12.9□□□□□ -0.34
UBE3C-205ENST00000470408 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
UBE3C-205ENST00000470408 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
UBE3C-205ENST00000470408 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
UBE3C-205ENST00000470408 ATAD2BQ9ULI0 1458 aa12.87□□□□□ -0.35
UBE3C-205ENST00000470408 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
UBE3C-205ENST00000470408 CDCA8Q53HL2 280 aa12.86□□□□□ -0.35
UBE3C-205ENST00000470408 RRP7BPQ9NSQ0 103 aa12.85□□□□□ -0.35
UBE3C-205ENST00000470408 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
UBE3C-205ENST00000470408 EIF4G1Q04637 1599 aaKnown RBP12.82□□□□□ -0.36
UBE3C-205ENST00000470408 KANK1Q14678 1352 aa12.81□□□□□ -0.36
UBE3C-205ENST00000470408 EIF4G2P78344 907 aaKnown RBP eCLIP12.81□□□□□ -0.36
UBE3C-205ENST00000470408 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
UBE3C-205ENST00000470408 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
UBE3C-205ENST00000470408 ANP32AP39687 249 aaKnown RBP12.79□□□□□ -0.36
UBE3C-205ENST00000470408 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
UBE3C-205ENST00000470408 TMC1Q8TDI8 760 aa12.77□□□□□ -0.37
UBE3C-205ENST00000470408 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
UBE3C-205ENST00000470408 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
UBE3C-205ENST00000470408 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
UBE3C-205ENST00000470408 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
UBE3C-205ENST00000470408 EFCAB2Q5VUJ9 269 aa12.75□□□□□ -0.37
UBE3C-205ENST00000470408 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.75□□□□□ -0.37
UBE3C-205ENST00000470408 RSPH4AQ5TD94 716 aa12.72□□□□□ -0.37
UBE3C-205ENST00000470408 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
UBE3C-205ENST00000470408 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.38
UBE3C-205ENST00000470408 RAPGEF2Q9Y4G8 1499 aa12.71□□□□□ -0.38
UBE3C-205ENST00000470408 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.38
UBE3C-205ENST00000470408 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
UBE3C-205ENST00000470408 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
UBE3C-205ENST00000470408 NPM2Q86SE8 214 aaKnown RBP12.69□□□□□ -0.38
UBE3C-205ENST00000470408 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
UBE3C-205ENST00000470408 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
UBE3C-205ENST00000470408 WIZO95785 1651 aa12.69□□□□□ -0.38
UBE3C-205ENST00000470408 RGL3Q3MIN7 710 aa12.68□□□□□ -0.38
UBE3C-205ENST00000470408 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
UBE3C-205ENST00000470408 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
UBE3C-205ENST00000470408 HNRNPUQ00839 825 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBE3C-205ENST00000470408 JPH4Q96JJ6 628 aa12.65□□□□□ -0.38
UBE3C-205ENST00000470408 POGKQ9P215 609 aa12.64□□□□□ -0.39
UBE3C-205ENST00000470408 MRS2Q9HD23 443 aa12.64□□□□□ -0.39
UBE3C-205ENST00000470408 FKBP8Q14318 412 aa12.64□□□□□ -0.39
UBE3C-205ENST00000470408 CARD11Q9BXL7 1154 aa12.64□□□□□ -0.39
UBE3C-205ENST00000470408 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
UBE3C-205ENST00000470408 KNSTRNQ9Y448 316 aa12.63□□□□□ -0.39
UBE3C-205ENST00000470408 FAM9BQ8IZU0 186 aa12.63□□□□□ -0.39
UBE3C-205ENST00000470408 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
UBE3C-205ENST00000470408 ANKRD30AQ9BXX3 1397 aa12.61□□□□□ -0.39
UBE3C-205ENST00000470408 CCDC18Q5T9S5 1454 aa12.6□□□□□ -0.39
UBE3C-205ENST00000470408 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
UBE3C-205ENST00000470408 UPF2Q9HAU5 1272 aaKnown RBP12.59□□□□□ -0.39
UBE3C-205ENST00000470408 NUDCQ9Y266 331 aa12.59□□□□□ -0.39
UBE3C-205ENST00000470408 PNNQ9H307 717 aaKnown RBP12.57□□□□□ -0.4
UBE3C-205ENST00000470408 SETD5Q9C0A6 1442 aa12.56□□□□□ -0.4
UBE3C-205ENST00000470408 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
UBE3C-205ENST00000470408 PTPRGP23470 1445 aa12.55□□□□□ -0.4
UBE3C-205ENST00000470408 TMF1P82094 1093 aa12.55□□□□□ -0.4
UBE3C-205ENST00000470408 GGT6Q6P531 493 aa12.54□□□□□ -0.4
UBE3C-205ENST00000470408 MLECQ14165 292 aa12.53□□□□□ -0.4
UBE3C-205ENST00000470408 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.4
UBE3C-205ENST00000470408 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.4
UBE3C-205ENST00000470408 ANP32BQ92688 251 aaKnown RBP12.52□□□□□ -0.4
UBE3C-205ENST00000470408 BCL11AQ9H165 835 aa12.52□□□□□ -0.41
UBE3C-205ENST00000470408 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
UBE3C-205ENST00000470408 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
UBE3C-205ENST00000470408 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
UBE3C-205ENST00000470408 ANP32EQ9BTT0 268 aa12.49□□□□□ -0.41
UBE3C-205ENST00000470408 PKD2Q13563 968 aa12.49□□□□□ -0.41
UBE3C-205ENST00000470408 CHMP4BQ9H444 224 aaKnown RBP12.48□□□□□ -0.41
UBE3C-205ENST00000470408 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
UBE3C-205ENST00000470408 A0A0G2JS52 829 aa12.48□□□□□ -0.41
UBE3C-205ENST00000470408 NUP155O75694 1391 aa12.48□□□□□ -0.41
UBE3C-205ENST00000470408 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
UBE3C-205ENST00000470408 FHOD3Q2V2M9 1422 aa12.47□□□□□ -0.41
UBE3C-205ENST00000470408 EID1Q9Y6B2 187 aa12.47□□□□□ -0.41
UBE3C-205ENST00000470408 KIF3BO15066 747 aa12.46□□□□□ -0.42
UBE3C-205ENST00000470408 CCDC136Q96JN2 1154 aa12.45□□□□□ -0.42
UBE3C-205ENST00000470408 HMGXB3Q12766 1538 aa12.45□□□□□ -0.42
UBE3C-205ENST00000470408 HSP90AA1P07900 732 aaKnown RBP12.45□□□□□ -0.42
UBE3C-205ENST00000470408 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
UBE3C-205ENST00000470408 MS4A1P11836 297 aa12.44□□□□□ -0.42
UBE3C-205ENST00000470408 EIF3AQ14152 1382 aaKnown RBP12.44□□□□□ -0.42
UBE3C-205ENST00000470408 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
UBE3C-205ENST00000470408 IGF1RP08069 1367 aa12.43□□□□□ -0.42
UBE3C-205ENST00000470408 KANK4Q5T7N3 995 aaPredicted RBP12.43□□□□□ -0.42
UBE3C-205ENST00000470408 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
UBE3C-205ENST00000470408 SRPK2P78362 688 aaKnown RBP12.42□□□□□ -0.42
UBE3C-205ENST00000470408 CFTRP13569 1480 aa12.42□□□□□ -0.42
UBE3C-205ENST00000470408 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
UBE3C-205ENST00000470408 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
UBE3C-205ENST00000470408 SIN3AQ96ST3 1273 aa12.42□□□□□ -0.42
UBE3C-205ENST00000470408 MPHOSPH9Q99550 1183 aa12.42□□□□□ -0.42
UBE3C-205ENST00000470408 NBR1Q14596 966 aa12.42□□□□□ -0.42
UBE3C-205ENST00000470408 MIER1Q8N108 512 aa12.41□□□□□ -0.42
UBE3C-205ENST00000470408 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
UBE3C-205ENST00000470408 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
UBE3C-205ENST00000470408 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms