RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
SYNGAP1-205ENST00000470232 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
SYNGAP1-205ENST00000470232 ILDR1Q86SU0 546 aaPredicted RBP16.09■□□□□ 0.17
SYNGAP1-205ENST00000470232 KDM4FA0A1W2PPD8 638 aa16.08■□□□□ 0.16
SYNGAP1-205ENST00000470232 ERICH3Q5RHP9 1530 aa16.07■□□□□ 0.16
SYNGAP1-205ENST00000470232 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
SYNGAP1-205ENST00000470232 KDM6BO15054 1643 aa16.02■□□□□ 0.16
SYNGAP1-205ENST00000470232 FOXD1Q16676 465 aa16.02■□□□□ 0.16
SYNGAP1-205ENST00000470232 DIP2BQ9P265 1576 aa16■□□□□ 0.15
SYNGAP1-205ENST00000470232 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
SYNGAP1-205ENST00000470232 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
SYNGAP1-205ENST00000470232 TSPOAP1O95153 1857 aa15.95■□□□□ 0.14
SYNGAP1-205ENST00000470232 ADCY10Q96PN6 1610 aa15.94■□□□□ 0.14
SYNGAP1-205ENST00000470232 RUSC2Q8N2Y8 1516 aa15.91■□□□□ 0.14
SYNGAP1-205ENST00000470232 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
SYNGAP1-205ENST00000470232 KIAA0586Q9BVV6 1533 aa15.87■□□□□ 0.13
SYNGAP1-205ENST00000470232 PTPRGP23470 1445 aa15.85■□□□□ 0.13
SYNGAP1-205ENST00000470232 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
SYNGAP1-205ENST00000470232 ADGRL1O94910 1474 aa15.82■□□□□ 0.12
SYNGAP1-205ENST00000470232 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
SYNGAP1-205ENST00000470232 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
SYNGAP1-205ENST00000470232 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
SYNGAP1-205ENST00000470232 GLI2P10070 1586 aa15.78■□□□□ 0.12
SYNGAP1-205ENST00000470232 ABCC2Q92887 1545 aa15.78■□□□□ 0.12
SYNGAP1-205ENST00000470232 ASXL2Q76L83 1435 aa15.77■□□□□ 0.12
SYNGAP1-205ENST00000470232 IGF1RP08069 1367 aa15.77■□□□□ 0.12
SYNGAP1-205ENST00000470232 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
SYNGAP1-205ENST00000470232 CUL7Q14999 1698 aa15.73■□□□□ 0.11
SYNGAP1-205ENST00000470232 HECW2Q9P2P5 1572 aa15.73■□□□□ 0.11
SYNGAP1-205ENST00000470232 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
SYNGAP1-205ENST00000470232 PPRC1Q5VV67 1664 aaKnown RBP15.71■□□□□ 0.11
SYNGAP1-205ENST00000470232 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.1
SYNGAP1-205ENST00000470232 UACAQ9BZF9 1416 aa15.69■□□□□ 0.1
SYNGAP1-205ENST00000470232 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
SYNGAP1-205ENST00000470232 COL17A1Q9UMD9 1497 aaPredicted RBP15.67■□□□□ 0.1
SYNGAP1-205ENST00000470232 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
SYNGAP1-205ENST00000470232 FBXO41Q8TF61 875 aa15.67■□□□□ 0.1
SYNGAP1-205ENST00000470232 EPRSP07814 1512 aaKnown RBP15.67■□□□□ 0.1
SYNGAP1-205ENST00000470232 MAP3K4Q9Y6R4 1608 aa15.64■□□□□ 0.09
SYNGAP1-205ENST00000470232 KDM5BQ9UGL1 1544 aa15.63■□□□□ 0.09
SYNGAP1-205ENST00000470232 IQGAP2Q13576 1575 aa15.62■□□□□ 0.09
SYNGAP1-205ENST00000470232 DISP1Q96F81 1524 aa15.56■□□□□ 0.08
SYNGAP1-205ENST00000470232 ZCCHC11Q5TAX3 1644 aaKnown RBP15.56■□□□□ 0.08
SYNGAP1-205ENST00000470232 CD109Q6YHK3 1445 aa15.55■□□□□ 0.08
SYNGAP1-205ENST00000470232 WDR7Q9Y4E6 1490 aa15.54■□□□□ 0.08
SYNGAP1-205ENST00000470232 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
SYNGAP1-205ENST00000470232 MAGI3Q5TCQ9 1506 aa15.52■□□□□ 0.07
SYNGAP1-205ENST00000470232 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
SYNGAP1-205ENST00000470232 UGGT2Q9NYU1 1516 aa15.5■□□□□ 0.07
SYNGAP1-205ENST00000470232 CFAP43Q8NDM7 1665 aa15.48■□□□□ 0.07
SYNGAP1-205ENST00000470232 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.07
SYNGAP1-205ENST00000470232 KIAA0556O60303 1618 aa15.46■□□□□ 0.06
SYNGAP1-205ENST00000470232 PHLDB1Q86UU1 1377 aa15.43■□□□□ 0.06
SYNGAP1-205ENST00000470232 KIF21BO75037 1637 aa15.43■□□□□ 0.06
SYNGAP1-205ENST00000470232 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
SYNGAP1-205ENST00000470232 PTPRMP28827 1452 aa15.41■□□□□ 0.06
SYNGAP1-205ENST00000470232 ARAP3Q8WWN8 1544 aa15.41■□□□□ 0.06
SYNGAP1-205ENST00000470232 ARID4BQ4LE39 1312 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-205ENST00000470232 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
SYNGAP1-205ENST00000470232 ABCA8O94911 1581 aa15.35■□□□□ 0.05
SYNGAP1-205ENST00000470232 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
SYNGAP1-205ENST00000470232 RAPGEF3O95398 923 aa15.33■□□□□ 0.04
SYNGAP1-205ENST00000470232 PCF11O94913 1555 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-205ENST00000470232 CTTNBP2Q8WZ74 1663 aa15.3■□□□□ 0.04
SYNGAP1-205ENST00000470232 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
SYNGAP1-205ENST00000470232 NEO1Q92859 1461 aa15.28■□□□□ 0.04
SYNGAP1-205ENST00000470232 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
SYNGAP1-205ENST00000470232 CERKQ8TCT0 537 aa15.28■□□□□ 0.04
SYNGAP1-205ENST00000470232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
SYNGAP1-205ENST00000470232 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-205ENST00000470232 ATP10BO94823 1461 aa15.26■□□□□ 0.03
SYNGAP1-205ENST00000470232 ABCA9Q8IUA7 1624 aa15.25■□□□□ 0.03
SYNGAP1-205ENST00000470232 MADDQ8WXG6 1647 aa15.25■□□□□ 0.03
SYNGAP1-205ENST00000470232 POGZQ7Z3K3 1410 aa15.24■□□□□ 0.03
SYNGAP1-205ENST00000470232 HSPA2P54652 639 aa15.23■□□□□ 0.03
SYNGAP1-205ENST00000470232 P3H3Q8IVL6 736 aa15.23■□□□□ 0.03
SYNGAP1-205ENST00000470232 SOCS7O14512 581 aa15.21■□□□□ 0.03
SYNGAP1-205ENST00000470232 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
SYNGAP1-205ENST00000470232 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-205ENST00000470232 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-205ENST00000470232 PLEKHD1A6NEE1 506 aa15.17■□□□□ 0.02
SYNGAP1-205ENST00000470232 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
SYNGAP1-205ENST00000470232 AKNAQ7Z591 1439 aa15.17■□□□□ 0.02
SYNGAP1-205ENST00000470232 FANCAO15360 1455 aa15.16■□□□□ 0.02
SYNGAP1-205ENST00000470232 ARHGEF40Q8TER5 1519 aa15.15■□□□□ 0.02
SYNGAP1-205ENST00000470232 FRMPD1Q5SYB0 1578 aa15.15■□□□□ 0.02
SYNGAP1-205ENST00000470232 PRXQ9BXM0 1461 aa15.14■□□□□ 0.01
SYNGAP1-205ENST00000470232 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
SYNGAP1-205ENST00000470232 MLECQ14165 292 aa15.13■□□□□ 0.01
SYNGAP1-205ENST00000470232 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
SYNGAP1-205ENST00000470232 ILDR2Q71H61 639 aa15.13■□□□□ 0.01
SYNGAP1-205ENST00000470232 RAPGEF6Q8TEU7 1601 aa15.12■□□□□ 0.01
SYNGAP1-205ENST00000470232 ADRA2BP18089 450 aa15.11■□□□□ 0.01
SYNGAP1-205ENST00000470232 CFAP74Q9C0B2 1584 aa15.11■□□□□ 0.01
SYNGAP1-205ENST00000470232 MAGI2Q86UL8 1455 aa15.1■□□□□ 0.01
SYNGAP1-205ENST00000470232 RICTORQ6R327 1708 aa15.09■□□□□ 0.01
SYNGAP1-205ENST00000470232 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
SYNGAP1-205ENST00000470232 YEATS2Q9ULM3 1422 aa15.08■□□□□ 0
SYNGAP1-205ENST00000470232 ZFYVE16Q7Z3T8 1539 aa15.07■□□□□ 0
SYNGAP1-205ENST00000470232 ZMYM4Q5VZL5 1548 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 314.2 ms