RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 GRIN2AQ12879 1464 aa15.82■□□□□ 0.12
LSM2-210ENST00000470086 TSPOAP1O95153 1857 aa15.82■□□□□ 0.12
LSM2-210ENST00000470086 NUP160Q12769 1436 aa15.77■□□□□ 0.12
LSM2-210ENST00000470086 KDM6BO15054 1643 aa15.77■□□□□ 0.12
LSM2-210ENST00000470086 ABCA10Q8WWZ4 1543 aa15.77■□□□□ 0.11
LSM2-210ENST00000470086 ADCY10Q96PN6 1610 aa15.75■□□□□ 0.11
LSM2-210ENST00000470086 KDM4FA0A1W2PPD8 638 aa15.73■□□□□ 0.11
LSM2-210ENST00000470086 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
LSM2-210ENST00000470086 PPRC1Q5VV67 1664 aaKnown RBP15.7■□□□□ 0.1
LSM2-210ENST00000470086 ABCC10Q5T3U5 1492 aa15.69■□□□□ 0.1
LSM2-210ENST00000470086 MAPKBP1O60336 1514 aa15.68■□□□□ 0.1
LSM2-210ENST00000470086 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
LSM2-210ENST00000470086 HECW2Q9P2P5 1572 aa15.64■□□□□ 0.09
LSM2-210ENST00000470086 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
LSM2-210ENST00000470086 ADGRL1O94910 1474 aa15.57■□□□□ 0.08
LSM2-210ENST00000470086 TOP2BQ02880 1626 aa15.56■□□□□ 0.08
LSM2-210ENST00000470086 ERICH3Q5RHP9 1530 aa15.55■□□□□ 0.08
LSM2-210ENST00000470086 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
LSM2-210ENST00000470086 FAM69CQ0P6D2 419 aa15.53■□□□□ 0.08
LSM2-210ENST00000470086 CUL7Q14999 1698 aa15.51■□□□□ 0.07
LSM2-210ENST00000470086 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
LSM2-210ENST00000470086 POTEDQ86YR6 584 aa15.45■□□□□ 0.06
LSM2-210ENST00000470086 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
LSM2-210ENST00000470086 COL17A1Q9UMD9 1497 aaPredicted RBP15.44■□□□□ 0.06
LSM2-210ENST00000470086 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
LSM2-210ENST00000470086 MAP3K4Q9Y6R4 1608 aa15.43■□□□□ 0.06
LSM2-210ENST00000470086 ABCC2Q92887 1545 aa15.41■□□□□ 0.06
LSM2-210ENST00000470086 GLI2P10070 1586 aa15.39■□□□□ 0.05
LSM2-210ENST00000470086 MAPK8IP2Q13387 824 aaPredicted RBP15.38■□□□□ 0.05
LSM2-210ENST00000470086 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
LSM2-210ENST00000470086 KIF21BO75037 1637 aa15.35■□□□□ 0.05
LSM2-210ENST00000470086 ZCCHC11Q5TAX3 1644 aaKnown RBP15.32■□□□□ 0.04
LSM2-210ENST00000470086 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
LSM2-210ENST00000470086 KIAA0586Q9BVV6 1533 aa15.28■□□□□ 0.04
LSM2-210ENST00000470086 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
LSM2-210ENST00000470086 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
LSM2-210ENST00000470086 EPRSP07814 1512 aaKnown RBP15.25■□□□□ 0.03
LSM2-210ENST00000470086 PLB1Q6P1J6 1458 aa15.2■□□□□ 0.02
LSM2-210ENST00000470086 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
LSM2-210ENST00000470086 UHRF1BP1LA0JNW5 1464 aa15.19■□□□□ 0.02
LSM2-210ENST00000470086 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
LSM2-210ENST00000470086 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
LSM2-210ENST00000470086 KDM5BQ9UGL1 1544 aa15.17■□□□□ 0.02
LSM2-210ENST00000470086 ADAMTSL3P82987 1691 aa15.17■□□□□ 0.02
LSM2-210ENST00000470086 CFAP43Q8NDM7 1665 aa15.17■□□□□ 0.02
LSM2-210ENST00000470086 PTPRGP23470 1445 aa15.17■□□□□ 0.02
LSM2-210ENST00000470086 FBXO41Q8TF61 875 aa15.15■□□□□ 0.02
LSM2-210ENST00000470086 TEX14Q8IWB6 1497 aa15.14■□□□□ 0.01
LSM2-210ENST00000470086 KIAA0556O60303 1618 aa15.14■□□□□ 0.01
LSM2-210ENST00000470086 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
LSM2-210ENST00000470086 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
LSM2-210ENST00000470086 IGF1RP08069 1367 aa15.1■□□□□ 0.01
LSM2-210ENST00000470086 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
LSM2-210ENST00000470086 BCORL1Q5H9F3 1711 aa15.09■□□□□ 0.01
LSM2-210ENST00000470086 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
LSM2-210ENST00000470086 SIGLEC1Q9BZZ2 1709 aa15.08■□□□□ 0
LSM2-210ENST00000470086 WDR7Q9Y4E6 1490 aa15.07■□□□□ 0
LSM2-210ENST00000470086 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
LSM2-210ENST00000470086 FRMPD1Q5SYB0 1578 aa15.07■□□□□ 0
LSM2-210ENST00000470086 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
LSM2-210ENST00000470086 RIMS1Q86UR5 1692 aaKnown RBP15.05■□□□□ -0
LSM2-210ENST00000470086 CTTNBP2Q8WZ74 1663 aa15.05■□□□□ -0
LSM2-210ENST00000470086 PTPRMP28827 1452 aa15.04■□□□□ -0
LSM2-210ENST00000470086 MAGI3Q5TCQ9 1506 aa15.03■□□□□ -0
LSM2-210ENST00000470086 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
LSM2-210ENST00000470086 CARMIL2Q6F5E8 1435 aa15.02■□□□□ -0
LSM2-210ENST00000470086 ABCA8O94911 1581 aa14.99□□□□□ -0.01
LSM2-210ENST00000470086 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
LSM2-210ENST00000470086 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
LSM2-210ENST00000470086 ILDR2Q71H61 639 aa14.97□□□□□ -0.01
LSM2-210ENST00000470086 SUPT5HO00267 1087 aaKnown RBP14.96□□□□□ -0.01
LSM2-210ENST00000470086 CARMIL1Q5VZK9 1371 aa14.95□□□□□ -0.02
LSM2-210ENST00000470086 CD109Q6YHK3 1445 aa14.94□□□□□ -0.02
LSM2-210ENST00000470086 ARAP3Q8WWN8 1544 aa14.93□□□□□ -0.02
LSM2-210ENST00000470086 ABCA9Q8IUA7 1624 aa14.93□□□□□ -0.02
LSM2-210ENST00000470086 RICTORQ6R327 1708 aa14.92□□□□□ -0.02
LSM2-210ENST00000470086 ARHGEF40Q8TER5 1519 aa14.92□□□□□ -0.02
LSM2-210ENST00000470086 SPATA31D1Q6ZQQ2 1576 aa14.91□□□□□ -0.02
LSM2-210ENST00000470086 HOXD11P31277 338 aaPredicted RBP14.89□□□□□ -0.03
LSM2-210ENST00000470086 FER1L4A9Z1Z3 1794 aa14.88□□□□□ -0.03
LSM2-210ENST00000470086 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
LSM2-210ENST00000470086 STRCQ7RTU9 1775 aa14.86□□□□□ -0.03
LSM2-210ENST00000470086 HSPA2P54652 639 aa14.82□□□□□ -0.04
LSM2-210ENST00000470086 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
LSM2-210ENST00000470086 PREX1Q8TCU6 1659 aa14.81□□□□□ -0.04
LSM2-210ENST00000470086 KCNA4P22459 653 aa14.81□□□□□ -0.04
LSM2-210ENST00000470086 DISP3Q9P2K9 1392 aa14.8□□□□□ -0.04
LSM2-210ENST00000470086 TTC37Q6PGP7 1564 aa14.8□□□□□ -0.04
LSM2-210ENST00000470086 SOCS7O14512 581 aa14.79□□□□□ -0.04
LSM2-210ENST00000470086 KCNH8Q96L42 1107 aa14.79□□□□□ -0.04
LSM2-210ENST00000470086 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
LSM2-210ENST00000470086 RAPGEF3O95398 923 aa14.76□□□□□ -0.05
LSM2-210ENST00000470086 ATP10BO94823 1461 aa14.75□□□□□ -0.05
LSM2-210ENST00000470086 RAPGEF6Q8TEU7 1601 aa14.74□□□□□ -0.05
LSM2-210ENST00000470086 ZMYM4Q5VZL5 1548 aa14.73□□□□□ -0.05
LSM2-210ENST00000470086 ARID3CA6NKF2 412 aa14.73□□□□□ -0.05
LSM2-210ENST00000470086 CERKQ8TCT0 537 aa14.73□□□□□ -0.05
LSM2-210ENST00000470086 NEO1Q92859 1461 aa14.73□□□□□ -0.05
LSM2-210ENST00000470086 SAMD9Q5K651 1589 aa14.71□□□□□ -0.05
LSM2-210ENST00000470086 YEATS2Q9ULM3 1422 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms