RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 JPH4Q96JJ6 628 aa22.06■■□□□ 1.12
LSM2-209ENST00000470083 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
LSM2-209ENST00000470083 NPM1P06748 294 aaKnown RBP eCLIP22.04■■□□□ 1.12
LSM2-209ENST00000470083 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.12
LSM2-209ENST00000470083 DIP2BQ9P265 1576 aa22.01■■□□□ 1.11
LSM2-209ENST00000470083 KDM6BO15054 1643 aa21.98■■□□□ 1.11
LSM2-209ENST00000470083 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
LSM2-209ENST00000470083 ADCY10Q96PN6 1610 aa21.91■■□□□ 1.1
LSM2-209ENST00000470083 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
LSM2-209ENST00000470083 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
LSM2-209ENST00000470083 TSPOAP1O95153 1857 aa21.77■■□□□ 1.08
LSM2-209ENST00000470083 ADGRL1O94910 1474 aa21.77■■□□□ 1.07
LSM2-209ENST00000470083 KIAA0586Q9BVV6 1533 aa21.75■■□□□ 1.07
LSM2-209ENST00000470083 PTPRGP23470 1445 aa21.69■■□□□ 1.06
LSM2-209ENST00000470083 HECW2Q9P2P5 1572 aa21.66■■□□□ 1.06
LSM2-209ENST00000470083 ABCC2Q92887 1545 aa21.66■■□□□ 1.06
LSM2-209ENST00000470083 PLB1Q6P1J6 1458 aa21.66■■□□□ 1.06
LSM2-209ENST00000470083 GLI2P10070 1586 aa21.65■■□□□ 1.06
LSM2-209ENST00000470083 ASXL2Q76L83 1435 aa21.65■■□□□ 1.06
LSM2-209ENST00000470083 PPRC1Q5VV67 1664 aaKnown RBP21.63■■□□□ 1.05
LSM2-209ENST00000470083 IGF1RP08069 1367 aa21.61■■□□□ 1.05
LSM2-209ENST00000470083 COL17A1Q9UMD9 1497 aaPredicted RBP21.61■■□□□ 1.05
LSM2-209ENST00000470083 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
LSM2-209ENST00000470083 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
LSM2-209ENST00000470083 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
LSM2-209ENST00000470083 CARMIL2Q6F5E8 1435 aa21.56■■□□□ 1.04
LSM2-209ENST00000470083 UHRF1BP1LA0JNW5 1464 aa21.55■■□□□ 1.04
LSM2-209ENST00000470083 CUL7Q14999 1698 aa21.53■■□□□ 1.04
LSM2-209ENST00000470083 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.04
LSM2-209ENST00000470083 EPRSP07814 1512 aaKnown RBP21.52■■□□□ 1.04
LSM2-209ENST00000470083 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
LSM2-209ENST00000470083 UACAQ9BZF9 1416 aa21.5■■□□□ 1.03
LSM2-209ENST00000470083 FBXO41Q8TF61 875 aa21.47■■□□□ 1.03
LSM2-209ENST00000470083 MAP3K4Q9Y6R4 1608 aa21.47■■□□□ 1.03
LSM2-209ENST00000470083 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
LSM2-209ENST00000470083 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
LSM2-209ENST00000470083 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
LSM2-209ENST00000470083 DISP1Q96F81 1524 aa21.39■■□□□ 1.01
LSM2-209ENST00000470083 WDR7Q9Y4E6 1490 aa21.33■■□□□ 1.01
LSM2-209ENST00000470083 ZCCHC11Q5TAX3 1644 aaKnown RBP21.33■■□□□ 1
LSM2-209ENST00000470083 MAGI3Q5TCQ9 1506 aa21.29■■□□□ 1
LSM2-209ENST00000470083 UGGT2Q9NYU1 1516 aa21.28■■□□□ 1
LSM2-209ENST00000470083 CD109Q6YHK3 1445 aa21.28■■□□□ 1
LSM2-209ENST00000470083 KIAA0556O60303 1618 aa21.22■□□□□ 0.99
LSM2-209ENST00000470083 KIF21BO75037 1637 aa21.18■□□□□ 0.98
LSM2-209ENST00000470083 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
LSM2-209ENST00000470083 KCNH8Q96L42 1107 aa21.17■□□□□ 0.98
LSM2-209ENST00000470083 PTPRMP28827 1452 aa21.17■□□□□ 0.98
LSM2-209ENST00000470083 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
LSM2-209ENST00000470083 ARAP3Q8WWN8 1544 aa21.14■□□□□ 0.98
LSM2-209ENST00000470083 ADAMTSL3P82987 1691 aa21.09■□□□□ 0.97
LSM2-209ENST00000470083 ABCA8O94911 1581 aa21.09■□□□□ 0.97
LSM2-209ENST00000470083 LMTK3Q96Q04 1460 aa21.08■□□□□ 0.97
LSM2-209ENST00000470083 PCF11O94913 1555 aaKnown RBP21.08■□□□□ 0.97
LSM2-209ENST00000470083 PHLDB1Q86UU1 1377 aa21.06■□□□□ 0.96
LSM2-209ENST00000470083 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
LSM2-209ENST00000470083 RAPGEF3O95398 923 aa20.99■□□□□ 0.95
LSM2-209ENST00000470083 ARID4BQ4LE39 1312 aaPredicted RBP20.96■□□□□ 0.95
LSM2-209ENST00000470083 MADDQ8WXG6 1647 aa20.96■□□□□ 0.95
LSM2-209ENST00000470083 BCORL1Q5H9F3 1711 aa20.95■□□□□ 0.94
LSM2-209ENST00000470083 NEO1Q92859 1461 aa20.94■□□□□ 0.94
LSM2-209ENST00000470083 ATP10BO94823 1461 aa20.93■□□□□ 0.94
LSM2-209ENST00000470083 ABCA9Q8IUA7 1624 aa20.93■□□□□ 0.94
LSM2-209ENST00000470083 CERKQ8TCT0 537 aa20.92■□□□□ 0.94
LSM2-209ENST00000470083 ARID3CA6NKF2 412 aa20.91■□□□□ 0.94
LSM2-209ENST00000470083 HSPA2P54652 639 aa20.9■□□□□ 0.94
LSM2-209ENST00000470083 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.94
LSM2-209ENST00000470083 FRMPD1Q5SYB0 1578 aa20.89■□□□□ 0.93
LSM2-209ENST00000470083 SOCS7O14512 581 aa20.87■□□□□ 0.93
LSM2-209ENST00000470083 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
LSM2-209ENST00000470083 ILDR2Q71H61 639 aa20.85■□□□□ 0.93
LSM2-209ENST00000470083 ARHGEF40Q8TER5 1519 aa20.84■□□□□ 0.93
LSM2-209ENST00000470083 DISP3Q9P2K9 1392 aa20.84■□□□□ 0.93
LSM2-209ENST00000470083 RIMS1Q86UR5 1692 aaKnown RBP20.83■□□□□ 0.92
LSM2-209ENST00000470083 POGZQ7Z3K3 1410 aa20.79■□□□□ 0.92
LSM2-209ENST00000470083 DENND4BO75064 1496 aaPredicted RBP20.79■□□□□ 0.92
LSM2-209ENST00000470083 PRXQ9BXM0 1461 aa20.79■□□□□ 0.92
LSM2-209ENST00000470083 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
LSM2-209ENST00000470083 P3H3Q8IVL6 736 aa20.77■□□□□ 0.92
LSM2-209ENST00000470083 FANCAO15360 1455 aa20.76■□□□□ 0.91
LSM2-209ENST00000470083 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
LSM2-209ENST00000470083 AKNAQ7Z591 1439 aa20.76■□□□□ 0.91
LSM2-209ENST00000470083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.72■□□□□ 0.91
LSM2-209ENST00000470083 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
LSM2-209ENST00000470083 RICTORQ6R327 1708 aa20.7■□□□□ 0.9
LSM2-209ENST00000470083 ZMYM4Q5VZL5 1548 aa20.7■□□□□ 0.9
LSM2-209ENST00000470083 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
LSM2-209ENST00000470083 YEATS2Q9ULM3 1422 aa20.69■□□□□ 0.9
LSM2-209ENST00000470083 NUP153P49790 1475 aaKnown RBP20.68■□□□□ 0.9
LSM2-209ENST00000470083 ZFYVE16Q7Z3T8 1539 aa20.68■□□□□ 0.9
LSM2-209ENST00000470083 MAGI2Q86UL8 1455 aa20.67■□□□□ 0.9
LSM2-209ENST00000470083 EFCAB5A4FU69 1503 aa20.67■□□□□ 0.9
LSM2-209ENST00000470083 TTC37Q6PGP7 1564 aa20.67■□□□□ 0.9
LSM2-209ENST00000470083 MLECQ14165 292 aa20.65■□□□□ 0.9
LSM2-209ENST00000470083 SAMD9Q5K651 1589 aa20.64■□□□□ 0.9
LSM2-209ENST00000470083 DMRT2Q9Y5R5 561 aa20.64■□□□□ 0.89
LSM2-209ENST00000470083 CFAP74Q9C0B2 1584 aa20.63■□□□□ 0.89
LSM2-209ENST00000470083 PLEKHD1A6NEE1 506 aa20.63■□□□□ 0.89
LSM2-209ENST00000470083 SIGLEC1Q9BZZ2 1709 aa20.63■□□□□ 0.89
LSM2-209ENST00000470083 SPATA31D1Q6ZQQ2 1576 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms