RNA–Protein interactions for RNA: ENST00000469330.5

TSPAN1-203, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 890 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-203ENST00000469330 BIVM-ERCC5R4GMW8 1640 aa13.6□□□□□ -0.23
TSPAN1-203ENST00000469330 KDM4FA0A1W2PPD8 638 aa13.57□□□□□ -0.24
TSPAN1-203ENST00000469330 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
TSPAN1-203ENST00000469330 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
TSPAN1-203ENST00000469330 FAM69CQ0P6D2 419 aa13.53□□□□□ -0.24
TSPAN1-203ENST00000469330 ILDR1Q86SU0 546 aaPredicted RBP13.53□□□□□ -0.24
TSPAN1-203ENST00000469330 PRG4Q92954 1404 aaPredicted RBP13.53□□□□□ -0.24
TSPAN1-203ENST00000469330 ABCC10Q5T3U5 1492 aa13.53□□□□□ -0.24
TSPAN1-203ENST00000469330 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
TSPAN1-203ENST00000469330 DIP2BQ9P265 1576 aa13.5□□□□□ -0.25
TSPAN1-203ENST00000469330 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
TSPAN1-203ENST00000469330 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
TSPAN1-203ENST00000469330 ADCY10Q96PN6 1610 aa13.47□□□□□ -0.25
TSPAN1-203ENST00000469330 MSH5O43196 834 aa13.47□□□□□ -0.25
TSPAN1-203ENST00000469330 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
TSPAN1-203ENST00000469330 KDM6BO15054 1643 aa13.46□□□□□ -0.26
TSPAN1-203ENST00000469330 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
TSPAN1-203ENST00000469330 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
TSPAN1-203ENST00000469330 TSPOAP1O95153 1857 aa13.44□□□□□ -0.26
TSPAN1-203ENST00000469330 IGF1RP08069 1367 aa13.44□□□□□ -0.26
TSPAN1-203ENST00000469330 KIAA0586Q9BVV6 1533 aa13.38□□□□□ -0.27
TSPAN1-203ENST00000469330 CARMIL1Q5VZK9 1371 aa13.36□□□□□ -0.27
TSPAN1-203ENST00000469330 CUL7Q14999 1698 aa13.34□□□□□ -0.27
TSPAN1-203ENST00000469330 PPRC1Q5VV67 1664 aaKnown RBP13.34□□□□□ -0.27
TSPAN1-203ENST00000469330 ADGRL1O94910 1474 aa13.31□□□□□ -0.28
TSPAN1-203ENST00000469330 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
TSPAN1-203ENST00000469330 COL17A1Q9UMD9 1497 aaPredicted RBP13.3□□□□□ -0.28
TSPAN1-203ENST00000469330 CARMIL2Q6F5E8 1435 aa13.3□□□□□ -0.28
TSPAN1-203ENST00000469330 PTPRGP23470 1445 aa13.28□□□□□ -0.28
TSPAN1-203ENST00000469330 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.29
TSPAN1-203ENST00000469330 HECW2Q9P2P5 1572 aa13.27□□□□□ -0.29
TSPAN1-203ENST00000469330 GLI2P10070 1586 aa13.25□□□□□ -0.29
TSPAN1-203ENST00000469330 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
TSPAN1-203ENST00000469330 ABCC2Q92887 1545 aa13.24□□□□□ -0.29
TSPAN1-203ENST00000469330 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
TSPAN1-203ENST00000469330 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
TSPAN1-203ENST00000469330 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
TSPAN1-203ENST00000469330 FAM9AQ8IZU1 332 aaPredicted RBP13.21□□□□□ -0.29
TSPAN1-203ENST00000469330 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
TSPAN1-203ENST00000469330 MAP3K4Q9Y6R4 1608 aa13.19□□□□□ -0.3
TSPAN1-203ENST00000469330 IQGAP2Q13576 1575 aa13.19□□□□□ -0.3
TSPAN1-203ENST00000469330 ADRA2BP18089 450 aa13.18□□□□□ -0.3
TSPAN1-203ENST00000469330 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
TSPAN1-203ENST00000469330 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
TSPAN1-203ENST00000469330 UACAQ9BZF9 1416 aa13.15□□□□□ -0.3
TSPAN1-203ENST00000469330 DISP1Q96F81 1524 aa13.14□□□□□ -0.31
TSPAN1-203ENST00000469330 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
TSPAN1-203ENST00000469330 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
TSPAN1-203ENST00000469330 ZCCHC11Q5TAX3 1644 aaKnown RBP13.12□□□□□ -0.31
TSPAN1-203ENST00000469330 GOLGA3Q08378 1498 aa13.1□□□□□ -0.31
TSPAN1-203ENST00000469330 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
TSPAN1-203ENST00000469330 FBXO41Q8TF61 875 aa13.06□□□□□ -0.32
TSPAN1-203ENST00000469330 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
TSPAN1-203ENST00000469330 PRXQ9BXM0 1461 aa13.04□□□□□ -0.32
TSPAN1-203ENST00000469330 KIAA0556O60303 1618 aa13.04□□□□□ -0.32
TSPAN1-203ENST00000469330 KIF21BO75037 1637 aa13.03□□□□□ -0.32
TSPAN1-203ENST00000469330 WDR7Q9Y4E6 1490 aa13.03□□□□□ -0.32
TSPAN1-203ENST00000469330 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
TSPAN1-203ENST00000469330 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
TSPAN1-203ENST00000469330 CD109Q6YHK3 1445 aa13□□□□□ -0.33
TSPAN1-203ENST00000469330 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
TSPAN1-203ENST00000469330 EEA1Q15075 1411 aa12.98□□□□□ -0.33
TSPAN1-203ENST00000469330 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
TSPAN1-203ENST00000469330 ADAMTSL3P82987 1691 aa12.96□□□□□ -0.34
TSPAN1-203ENST00000469330 ABCA8O94911 1581 aa12.95□□□□□ -0.34
TSPAN1-203ENST00000469330 PTPRMP28827 1452 aa12.95□□□□□ -0.34
TSPAN1-203ENST00000469330 P3H3Q8IVL6 736 aa12.94□□□□□ -0.34
TSPAN1-203ENST00000469330 ARAP3Q8WWN8 1544 aa12.93□□□□□ -0.34
TSPAN1-203ENST00000469330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
TSPAN1-203ENST00000469330 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
TSPAN1-203ENST00000469330 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
TSPAN1-203ENST00000469330 LMTK3Q96Q04 1460 aa12.89□□□□□ -0.35
TSPAN1-203ENST00000469330 RAPGEF3O95398 923 aa12.88□□□□□ -0.35
TSPAN1-203ENST00000469330 ATP10BO94823 1461 aa12.88□□□□□ -0.35
TSPAN1-203ENST00000469330 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
TSPAN1-203ENST00000469330 PCF11O94913 1555 aaKnown RBP12.87□□□□□ -0.35
TSPAN1-203ENST00000469330 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
TSPAN1-203ENST00000469330 MADDQ8WXG6 1647 aa12.87□□□□□ -0.35
TSPAN1-203ENST00000469330 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
TSPAN1-203ENST00000469330 ARID3CA6NKF2 412 aa12.85□□□□□ -0.35
TSPAN1-203ENST00000469330 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
TSPAN1-203ENST00000469330 SAMD9Q5K651 1589 aa12.83□□□□□ -0.36
TSPAN1-203ENST00000469330 RANGAP1P46060 587 aaPredicted RBP12.83□□□□□ -0.36
TSPAN1-203ENST00000469330 HSPA2P54652 639 aa12.82□□□□□ -0.36
TSPAN1-203ENST00000469330 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
TSPAN1-203ENST00000469330 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
TSPAN1-203ENST00000469330 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
TSPAN1-203ENST00000469330 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
TSPAN1-203ENST00000469330 SIGLEC1Q9BZZ2 1709 aa12.79□□□□□ -0.36
TSPAN1-203ENST00000469330 NEO1Q92859 1461 aa12.78□□□□□ -0.36
TSPAN1-203ENST00000469330 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
TSPAN1-203ENST00000469330 ARID4BQ4LE39 1312 aaPredicted RBP12.77□□□□□ -0.37
TSPAN1-203ENST00000469330 EFCAB5A4FU69 1503 aa12.77□□□□□ -0.37
TSPAN1-203ENST00000469330 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
TSPAN1-203ENST00000469330 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
TSPAN1-203ENST00000469330 NUP153P49790 1475 aaKnown RBP12.75□□□□□ -0.37
TSPAN1-203ENST00000469330 RICTORQ6R327 1708 aa12.75□□□□□ -0.37
TSPAN1-203ENST00000469330 ARHGEF40Q8TER5 1519 aa12.75□□□□□ -0.37
TSPAN1-203ENST00000469330 FMN1Q68DA7 1419 aa12.72□□□□□ -0.37
TSPAN1-203ENST00000469330 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms