RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 TNIKQ9UKE5 1360 aa14.3□□□□□ -0.12
TRAPPC10-207ENST00000468864 DEKP35659 375 aaKnown RBP14.28□□□□□ -0.12
TRAPPC10-207ENST00000468864 LAS1LQ9Y4W2 734 aaKnown RBP14.28□□□□□ -0.12
TRAPPC10-207ENST00000468864 EIF4G2P78344 907 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRAPPC10-207ENST00000468864 RRP7BPQ9NSQ0 103 aa14.25□□□□□ -0.13
TRAPPC10-207ENST00000468864 SOGA1O94964 1423 aa14.24□□□□□ -0.13
TRAPPC10-207ENST00000468864 PPP4R2Q9NY27 417 aa14.23□□□□□ -0.13
TRAPPC10-207ENST00000468864 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
TRAPPC10-207ENST00000468864 MROH2BQ7Z745 1585 aa14.23□□□□□ -0.13
TRAPPC10-207ENST00000468864 GOLGA3Q08378 1498 aa14.23□□□□□ -0.13
TRAPPC10-207ENST00000468864 WIZO95785 1651 aa14.23□□□□□ -0.13
TRAPPC10-207ENST00000468864 NOP58Q9Y2X3 529 aaKnown RBP14.22□□□□□ -0.13
TRAPPC10-207ENST00000468864 KDM2AQ9Y2K7 1162 aa14.21□□□□□ -0.13
TRAPPC10-207ENST00000468864 NEFMP07197 916 aa14.18□□□□□ -0.14
TRAPPC10-207ENST00000468864 FBLN2P98095 1184 aa14.18□□□□□ -0.14
TRAPPC10-207ENST00000468864 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC10-207ENST00000468864 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
TRAPPC10-207ENST00000468864 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
TRAPPC10-207ENST00000468864 EEA1Q15075 1411 aa14.12□□□□□ -0.15
TRAPPC10-207ENST00000468864 MTUS2Q5JR59 1369 aa14.12□□□□□ -0.15
TRAPPC10-207ENST00000468864 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
TRAPPC10-207ENST00000468864 HSP90AA1P07900 732 aaKnown RBP14.1□□□□□ -0.15
TRAPPC10-207ENST00000468864 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC10-207ENST00000468864 UPF2Q9HAU5 1272 aaKnown RBP14.09□□□□□ -0.15
TRAPPC10-207ENST00000468864 SMARCA2P51531 1590 aa14.08□□□□□ -0.16
TRAPPC10-207ENST00000468864 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
TRAPPC10-207ENST00000468864 CCER2I3L3R5 266 aa14.06□□□□□ -0.16
TRAPPC10-207ENST00000468864 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
TRAPPC10-207ENST00000468864 GLIPR1L2Q4G1C9 344 aa14.06□□□□□ -0.16
TRAPPC10-207ENST00000468864 CEP164Q9UPV0 1460 aa14.05□□□□□ -0.16
TRAPPC10-207ENST00000468864 RGS3P49796 1198 aa14.04□□□□□ -0.16
TRAPPC10-207ENST00000468864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRAPPC10-207ENST00000468864 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC10-207ENST00000468864 PPM1GO15355 546 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC10-207ENST00000468864 WDR43Q15061 677 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRAPPC10-207ENST00000468864 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
TRAPPC10-207ENST00000468864 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
TRAPPC10-207ENST00000468864 ANP32BQ92688 251 aaKnown RBP14□□□□□ -0.17
TRAPPC10-207ENST00000468864 DDRGK1Q96HY6 314 aa14□□□□□ -0.17
TRAPPC10-207ENST00000468864 RGL3Q3MIN7 710 aa13.99□□□□□ -0.17
TRAPPC10-207ENST00000468864 VPS8Q8N3P4 1428 aa13.99□□□□□ -0.17
TRAPPC10-207ENST00000468864 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
TRAPPC10-207ENST00000468864 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
TRAPPC10-207ENST00000468864 FOXD1Q16676 465 aa13.96□□□□□ -0.17
TRAPPC10-207ENST00000468864 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.18
TRAPPC10-207ENST00000468864 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
TRAPPC10-207ENST00000468864 DHX57Q6P158 1386 aaKnown RBP13.94□□□□□ -0.18
TRAPPC10-207ENST00000468864 CHGAP10645 457 aaKnown RBP13.93□□□□□ -0.18
TRAPPC10-207ENST00000468864 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
TRAPPC10-207ENST00000468864 CARD11Q9BXL7 1154 aa13.92□□□□□ -0.18
TRAPPC10-207ENST00000468864 NAP1L5Q96NT1 182 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC10-207ENST00000468864 SETD5Q9C0A6 1442 aa13.9□□□□□ -0.18
TRAPPC10-207ENST00000468864 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
TRAPPC10-207ENST00000468864 BECN1Q14457 450 aa13.89□□□□□ -0.19
TRAPPC10-207ENST00000468864 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
TRAPPC10-207ENST00000468864 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
TRAPPC10-207ENST00000468864 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
TRAPPC10-207ENST00000468864 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
TRAPPC10-207ENST00000468864 CC2D1BQ5T0F9 858 aaKnown RBP13.88□□□□□ -0.19
TRAPPC10-207ENST00000468864 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC10-207ENST00000468864 ARID4BQ4LE39 1312 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC10-207ENST00000468864 TSPY4P0CV99 314 aa13.88□□□□□ -0.19
TRAPPC10-207ENST00000468864 TSPY10P0CW01 314 aa13.88□□□□□ -0.19
TRAPPC10-207ENST00000468864 TRIM44Q96DX7 344 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC10-207ENST00000468864 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
TRAPPC10-207ENST00000468864 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
TRAPPC10-207ENST00000468864 FRAT1Q92837 279 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC10-207ENST00000468864 BIVM-ERCC5R4GMW8 1640 aa13.83□□□□□ -0.2
TRAPPC10-207ENST00000468864 SLC4A3P48751 1232 aa13.83□□□□□ -0.2
TRAPPC10-207ENST00000468864 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
TRAPPC10-207ENST00000468864 NCLP19338 710 aaKnown RBP13.8□□□□□ -0.2
TRAPPC10-207ENST00000468864 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC10-207ENST00000468864 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
TRAPPC10-207ENST00000468864 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
TRAPPC10-207ENST00000468864 GZF1Q9H116 711 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC10-207ENST00000468864 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
TRAPPC10-207ENST00000468864 KNSTRNQ9Y448 316 aa13.78□□□□□ -0.2
TRAPPC10-207ENST00000468864 NUDCQ9Y266 331 aa13.77□□□□□ -0.2
TRAPPC10-207ENST00000468864 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
TRAPPC10-207ENST00000468864 TNNT2P45379 298 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC10-207ENST00000468864 DCAF11Q8TEB1 546 aa13.76□□□□□ -0.21
TRAPPC10-207ENST00000468864 TCERG1O14776 1098 aaKnown RBP13.76□□□□□ -0.21
TRAPPC10-207ENST00000468864 CFDP1Q9UEE9 299 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC10-207ENST00000468864 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
TRAPPC10-207ENST00000468864 ANO8Q9HCE9 1232 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC10-207ENST00000468864 PLIN1O60240 522 aa13.72□□□□□ -0.21
TRAPPC10-207ENST00000468864 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC10-207ENST00000468864 PRKRIP1Q9H875 184 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC10-207ENST00000468864 EXOC6Q8TAG9 804 aa13.71□□□□□ -0.21
TRAPPC10-207ENST00000468864 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.21
TRAPPC10-207ENST00000468864 PDE4AP27815 886 aa13.71□□□□□ -0.21
TRAPPC10-207ENST00000468864 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.22
TRAPPC10-207ENST00000468864 MSH5O43196 834 aa13.7□□□□□ -0.22
TRAPPC10-207ENST00000468864 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
TRAPPC10-207ENST00000468864 IL27Q8NEV9 243 aa13.69□□□□□ -0.22
TRAPPC10-207ENST00000468864 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
TRAPPC10-207ENST00000468864 KIF21BO75037 1637 aa13.67□□□□□ -0.22
TRAPPC10-207ENST00000468864 ARID3AQ99856 593 aa13.67□□□□□ -0.22
TRAPPC10-207ENST00000468864 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
TRAPPC10-207ENST00000468864 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms