RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PRG4Q92954 1404 aaPredicted RBP19.04■□□□□ 0.64
HDAC3-203ENST00000467533 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
HDAC3-203ENST00000467533 NPM1P06748 294 aaKnown RBP eCLIP18.99■□□□□ 0.63
HDAC3-203ENST00000467533 ADCY10Q96PN6 1610 aa18.98■□□□□ 0.63
HDAC3-203ENST00000467533 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
HDAC3-203ENST00000467533 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
HDAC3-203ENST00000467533 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
HDAC3-203ENST00000467533 JPH4Q96JJ6 628 aa18.9■□□□□ 0.62
HDAC3-203ENST00000467533 ADGRL1O94910 1474 aa18.9■□□□□ 0.62
HDAC3-203ENST00000467533 HECW2Q9P2P5 1572 aa18.89■□□□□ 0.62
HDAC3-203ENST00000467533 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.62
HDAC3-203ENST00000467533 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
HDAC3-203ENST00000467533 PPRC1Q5VV67 1664 aaKnown RBP18.79■□□□□ 0.6
HDAC3-203ENST00000467533 GLI2P10070 1586 aa18.7■□□□□ 0.58
HDAC3-203ENST00000467533 CUL7Q14999 1698 aa18.68■□□□□ 0.58
HDAC3-203ENST00000467533 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
HDAC3-203ENST00000467533 ABCC2Q92887 1545 aa18.66■□□□□ 0.58
HDAC3-203ENST00000467533 ASXL2Q76L83 1435 aa18.66■□□□□ 0.58
HDAC3-203ENST00000467533 PLB1Q6P1J6 1458 aa18.65■□□□□ 0.58
HDAC3-203ENST00000467533 TTBK1Q5TCY1 1321 aaPredicted RBP18.63■□□□□ 0.57
HDAC3-203ENST00000467533 PTPRGP23470 1445 aa18.63■□□□□ 0.57
HDAC3-203ENST00000467533 MAP3K4Q9Y6R4 1608 aa18.63■□□□□ 0.57
HDAC3-203ENST00000467533 FBXO41Q8TF61 875 aa18.62■□□□□ 0.57
HDAC3-203ENST00000467533 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
HDAC3-203ENST00000467533 TEX14Q8IWB6 1497 aa18.59■□□□□ 0.57
HDAC3-203ENST00000467533 EPRSP07814 1512 aaKnown RBP18.55■□□□□ 0.56
HDAC3-203ENST00000467533 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
HDAC3-203ENST00000467533 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
HDAC3-203ENST00000467533 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.56
HDAC3-203ENST00000467533 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
HDAC3-203ENST00000467533 UACAQ9BZF9 1416 aa18.49■□□□□ 0.55
HDAC3-203ENST00000467533 IQGAP2Q13576 1575 aa18.47■□□□□ 0.55
HDAC3-203ENST00000467533 KIF21BO75037 1637 aa18.47■□□□□ 0.55
HDAC3-203ENST00000467533 KDM5BQ9UGL1 1544 aa18.45■□□□□ 0.54
HDAC3-203ENST00000467533 IGF1RP08069 1367 aa18.44■□□□□ 0.54
HDAC3-203ENST00000467533 KIF27Q86VH2 1401 aa18.43■□□□□ 0.54
HDAC3-203ENST00000467533 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
HDAC3-203ENST00000467533 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.54
HDAC3-203ENST00000467533 CFAP43Q8NDM7 1665 aa18.39■□□□□ 0.53
HDAC3-203ENST00000467533 WDR7Q9Y4E6 1490 aa18.39■□□□□ 0.53
HDAC3-203ENST00000467533 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
HDAC3-203ENST00000467533 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
HDAC3-203ENST00000467533 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
HDAC3-203ENST00000467533 KIAA0556O60303 1618 aa18.33■□□□□ 0.52
HDAC3-203ENST00000467533 PTPRMP28827 1452 aa18.32■□□□□ 0.52
HDAC3-203ENST00000467533 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
HDAC3-203ENST00000467533 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
HDAC3-203ENST00000467533 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
HDAC3-203ENST00000467533 UGGT2Q9NYU1 1516 aa18.28■□□□□ 0.52
HDAC3-203ENST00000467533 MADDQ8WXG6 1647 aa18.23■□□□□ 0.51
HDAC3-203ENST00000467533 KCNH8Q96L42 1107 aa18.22■□□□□ 0.51
HDAC3-203ENST00000467533 BCORL1Q5H9F3 1711 aa18.22■□□□□ 0.51
HDAC3-203ENST00000467533 ARAP3Q8WWN8 1544 aa18.21■□□□□ 0.51
HDAC3-203ENST00000467533 RIMS1Q86UR5 1692 aaKnown RBP18.17■□□□□ 0.5
HDAC3-203ENST00000467533 ABCA8O94911 1581 aa18.17■□□□□ 0.5
HDAC3-203ENST00000467533 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
HDAC3-203ENST00000467533 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
HDAC3-203ENST00000467533 SOCS7O14512 581 aa18.15■□□□□ 0.5
HDAC3-203ENST00000467533 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.49
HDAC3-203ENST00000467533 ILDR2Q71H61 639 aa18.13■□□□□ 0.49
HDAC3-203ENST00000467533 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
HDAC3-203ENST00000467533 CERKQ8TCT0 537 aa18.09■□□□□ 0.49
HDAC3-203ENST00000467533 ABCA9Q8IUA7 1624 aa18.09■□□□□ 0.49
HDAC3-203ENST00000467533 FRMPD1Q5SYB0 1578 aa18.08■□□□□ 0.49
HDAC3-203ENST00000467533 GOLGA3Q08378 1498 aa18.08■□□□□ 0.49
HDAC3-203ENST00000467533 HSPA2P54652 639 aa18.07■□□□□ 0.48
HDAC3-203ENST00000467533 PHLDB1Q86UU1 1377 aa18.06■□□□□ 0.48
HDAC3-203ENST00000467533 SPATA31D1Q6ZQQ2 1576 aa18.06■□□□□ 0.48
HDAC3-203ENST00000467533 ARHGEF40Q8TER5 1519 aa18.06■□□□□ 0.48
HDAC3-203ENST00000467533 RAPGEF3O95398 923 aa18.05■□□□□ 0.48
HDAC3-203ENST00000467533 NEO1Q92859 1461 aa18.03■□□□□ 0.48
HDAC3-203ENST00000467533 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
HDAC3-203ENST00000467533 ARID3CA6NKF2 412 aa18■□□□□ 0.47
HDAC3-203ENST00000467533 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.47
HDAC3-203ENST00000467533 ATP10BO94823 1461 aa17.96■□□□□ 0.47
HDAC3-203ENST00000467533 RICTORQ6R327 1708 aa17.96■□□□□ 0.47
HDAC3-203ENST00000467533 FANCAO15360 1455 aa17.95■□□□□ 0.46
HDAC3-203ENST00000467533 POGZQ7Z3K3 1410 aa17.94■□□□□ 0.46
HDAC3-203ENST00000467533 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
HDAC3-203ENST00000467533 SIGLEC1Q9BZZ2 1709 aa17.92■□□□□ 0.46
HDAC3-203ENST00000467533 TTC37Q6PGP7 1564 aa17.91■□□□□ 0.46
HDAC3-203ENST00000467533 DENND4BO75064 1496 aaPredicted RBP17.9■□□□□ 0.46
HDAC3-203ENST00000467533 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
HDAC3-203ENST00000467533 CFAP74Q9C0B2 1584 aa17.9■□□□□ 0.46
HDAC3-203ENST00000467533 AKNAQ7Z591 1439 aa17.89■□□□□ 0.46
HDAC3-203ENST00000467533 ZFYVE16Q7Z3T8 1539 aa17.88■□□□□ 0.45
HDAC3-203ENST00000467533 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
HDAC3-203ENST00000467533 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
HDAC3-203ENST00000467533 ZMYM4Q5VZL5 1548 aa17.87■□□□□ 0.45
HDAC3-203ENST00000467533 STRCQ7RTU9 1775 aa17.85■□□□□ 0.45
HDAC3-203ENST00000467533 FHOD3Q2V2M9 1422 aa17.84■□□□□ 0.45
HDAC3-203ENST00000467533 MLECQ14165 292 aa17.84■□□□□ 0.45
HDAC3-203ENST00000467533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
HDAC3-203ENST00000467533 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
HDAC3-203ENST00000467533 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
HDAC3-203ENST00000467533 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
HDAC3-203ENST00000467533 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
HDAC3-203ENST00000467533 ARHGEF12Q9NZN5 1544 aa17.78■□□□□ 0.44
HDAC3-203ENST00000467533 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
HDAC3-203ENST00000467533 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms