RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
TMEM254-209ENST00000467529 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
TMEM254-209ENST00000467529 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
TMEM254-209ENST00000467529 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
TMEM254-209ENST00000467529 EIF4G3O43432 1585 aaKnown RBP13.84□□□□□ -0.19
TMEM254-209ENST00000467529 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.19
TMEM254-209ENST00000467529 P3H3Q8IVL6 736 aa13.82□□□□□ -0.2
TMEM254-209ENST00000467529 FHOD3Q2V2M9 1422 aa13.79□□□□□ -0.2
TMEM254-209ENST00000467529 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
TMEM254-209ENST00000467529 KANK4Q5T7N3 995 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-209ENST00000467529 SAMD9Q5K651 1589 aa13.77□□□□□ -0.2
TMEM254-209ENST00000467529 PCF11O94913 1555 aaKnown RBP13.75□□□□□ -0.21
TMEM254-209ENST00000467529 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
TMEM254-209ENST00000467529 TIAM1Q13009 1591 aa13.73□□□□□ -0.21
TMEM254-209ENST00000467529 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
TMEM254-209ENST00000467529 MAGI1Q96QZ7 1491 aaPredicted RBP13.73□□□□□ -0.21
TMEM254-209ENST00000467529 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
TMEM254-209ENST00000467529 FYCO1Q9BQS8 1478 aa13.71□□□□□ -0.21
TMEM254-209ENST00000467529 FMN1Q68DA7 1419 aa13.71□□□□□ -0.22
TMEM254-209ENST00000467529 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
TMEM254-209ENST00000467529 CFAP43Q8NDM7 1665 aa13.7□□□□□ -0.22
TMEM254-209ENST00000467529 SYNJ2O15056 1496 aa13.69□□□□□ -0.22
TMEM254-209ENST00000467529 ATP1B4Q9UN42 357 aaPredicted RBP13.68□□□□□ -0.22
TMEM254-209ENST00000467529 KIAA0586Q9BVV6 1533 aa13.68□□□□□ -0.22
TMEM254-209ENST00000467529 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
TMEM254-209ENST00000467529 CHMP7Q8WUX9 453 aaPredicted RBP13.67□□□□□ -0.22
TMEM254-209ENST00000467529 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
TMEM254-209ENST00000467529 ZEB1P37275 1124 aaPredicted RBP13.65□□□□□ -0.22
TMEM254-209ENST00000467529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
TMEM254-209ENST00000467529 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
TMEM254-209ENST00000467529 CEP170Q5SW79 1584 aa13.64□□□□□ -0.23
TMEM254-209ENST00000467529 RRBP1Q9P2E9 1410 aaKnown RBP13.64□□□□□ -0.23
TMEM254-209ENST00000467529 FBLN2P98095 1184 aa13.63□□□□□ -0.23
TMEM254-209ENST00000467529 LRRIQ1Q96JM4 1722 aa13.62□□□□□ -0.23
TMEM254-209ENST00000467529 NUP160Q12769 1436 aa13.61□□□□□ -0.23
TMEM254-209ENST00000467529 DISP1Q96F81 1524 aa13.6□□□□□ -0.23
TMEM254-209ENST00000467529 KIAA0556O60303 1618 aa13.6□□□□□ -0.23
TMEM254-209ENST00000467529 CCER1Q8TC90 406 aaPredicted RBP13.6□□□□□ -0.23
TMEM254-209ENST00000467529 CCNB3Q8WWL7 1395 aa13.58□□□□□ -0.24
TMEM254-209ENST00000467529 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
TMEM254-209ENST00000467529 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
TMEM254-209ENST00000467529 CCDC18Q5T9S5 1454 aa13.54□□□□□ -0.24
TMEM254-209ENST00000467529 MTUS2Q5JR59 1369 aa13.53□□□□□ -0.24
TMEM254-209ENST00000467529 JPH4Q96JJ6 628 aa13.52□□□□□ -0.24
TMEM254-209ENST00000467529 CHD1O14646 1710 aa13.52□□□□□ -0.24
TMEM254-209ENST00000467529 EPRSP07814 1512 aaKnown RBP13.52□□□□□ -0.25
TMEM254-209ENST00000467529 EHBP1L1Q8N3D4 1523 aa13.5□□□□□ -0.25
TMEM254-209ENST00000467529 CARMIL2Q6F5E8 1435 aa13.5□□□□□ -0.25
TMEM254-209ENST00000467529 MAGI3Q5TCQ9 1506 aa13.49□□□□□ -0.25
TMEM254-209ENST00000467529 RAPGEF6Q8TEU7 1601 aa13.49□□□□□ -0.25
TMEM254-209ENST00000467529 CDK13Q14004 1512 aaKnown RBP13.49□□□□□ -0.25
TMEM254-209ENST00000467529 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
TMEM254-209ENST00000467529 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
TMEM254-209ENST00000467529 ITGAEP38570 1179 aa13.47□□□□□ -0.25
TMEM254-209ENST00000467529 FAM50AQ14320 339 aaKnown RBP13.46□□□□□ -0.25
TMEM254-209ENST00000467529 NUP153P49790 1475 aaKnown RBP13.46□□□□□ -0.25
TMEM254-209ENST00000467529 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
TMEM254-209ENST00000467529 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
TMEM254-209ENST00000467529 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
TMEM254-209ENST00000467529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
TMEM254-209ENST00000467529 PLB1Q6P1J6 1458 aa13.43□□□□□ -0.26
TMEM254-209ENST00000467529 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
TMEM254-209ENST00000467529 PRG4Q92954 1404 aaPredicted RBP13.42□□□□□ -0.26
TMEM254-209ENST00000467529 SHROOM2Q13796 1616 aa13.4□□□□□ -0.26
TMEM254-209ENST00000467529 ABCA8O94911 1581 aa13.39□□□□□ -0.27
TMEM254-209ENST00000467529 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
TMEM254-209ENST00000467529 PTPN23Q9H3S7 1636 aa13.37□□□□□ -0.27
TMEM254-209ENST00000467529 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-209ENST00000467529 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
TMEM254-209ENST00000467529 SETD5Q9C0A6 1442 aa13.36□□□□□ -0.27
TMEM254-209ENST00000467529 PTPRGP23470 1445 aa13.35□□□□□ -0.27
TMEM254-209ENST00000467529 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
TMEM254-209ENST00000467529 TCOF1Q13428 1488 aaKnown RBP13.34□□□□□ -0.27
TMEM254-209ENST00000467529 TROQ12816 1431 aaPredicted RBP13.34□□□□□ -0.27
TMEM254-209ENST00000467529 ERCC6L2Q5T890 1561 aa13.33□□□□□ -0.28
TMEM254-209ENST00000467529 PTPRKQ15262 1439 aa13.33□□□□□ -0.28
TMEM254-209ENST00000467529 MIA2Q96PC5 1412 aa13.33□□□□□ -0.28
TMEM254-209ENST00000467529 ATP10BO94823 1461 aa13.32□□□□□ -0.28
TMEM254-209ENST00000467529 CLSPNQ9HAW4 1339 aa13.31□□□□□ -0.28
TMEM254-209ENST00000467529 ADCY10Q96PN6 1610 aa13.31□□□□□ -0.28
TMEM254-209ENST00000467529 KIF14Q15058 1648 aa13.29□□□□□ -0.28
TMEM254-209ENST00000467529 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
TMEM254-209ENST00000467529 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.28
TMEM254-209ENST00000467529 HFM1A2PYH4 1435 aa13.26□□□□□ -0.29
TMEM254-209ENST00000467529 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
TMEM254-209ENST00000467529 ITSN2Q9NZM3 1697 aa13.25□□□□□ -0.29
TMEM254-209ENST00000467529 GPATCH8Q9UKJ3 1502 aaKnown RBP13.25□□□□□ -0.29
TMEM254-209ENST00000467529 NAIPQ13075 1403 aa13.24□□□□□ -0.29
TMEM254-209ENST00000467529 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
TMEM254-209ENST00000467529 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
TMEM254-209ENST00000467529 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
TMEM254-209ENST00000467529 ABCC10Q5T3U5 1492 aa13.22□□□□□ -0.29
TMEM254-209ENST00000467529 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.29
TMEM254-209ENST00000467529 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
TMEM254-209ENST00000467529 DAPK1P53355 1430 aa13.21□□□□□ -0.29
TMEM254-209ENST00000467529 CFDP1Q9UEE9 299 aaPredicted RBP13.21□□□□□ -0.29
TMEM254-209ENST00000467529 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.3
TMEM254-209ENST00000467529 GCC2Q8IWJ2 1684 aa13.2□□□□□ -0.3
TMEM254-209ENST00000467529 ABCC5O15440 1437 aa13.2□□□□□ -0.3
TMEM254-209ENST00000467529 AKNAQ7Z591 1439 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms