RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 FHAD1B1AJZ9 1412 aa31.25■■■□□ 2.59
CCDC78-207ENST00000466708 AQRO60306 1485 aaKnown RBP eCLIP31.22■■■□□ 2.59
CCDC78-207ENST00000466708 GRIN2BQ13224 1484 aa31.22■■■□□ 2.59
CCDC78-207ENST00000466708 MAP3K1Q13233 1512 aa31.22■■■□□ 2.59
CCDC78-207ENST00000466708 THOC2Q8NI27 1593 aaKnown RBP31.2■■■□□ 2.59
CCDC78-207ENST00000466708 ADAMTS12P58397 1594 aa31.16■■■□□ 2.58
CCDC78-207ENST00000466708 KANK4Q5T7N3 995 aaPredicted RBP31.14■■■□□ 2.58
CCDC78-207ENST00000466708 TIAM1Q13009 1591 aa31.11■■■□□ 2.57
CCDC78-207ENST00000466708 ZNF608Q9ULD9 1512 aaPredicted RBP31.1■■■□□ 2.57
CCDC78-207ENST00000466708 FHOD3Q2V2M9 1422 aa31.09■■■□□ 2.57
CCDC78-207ENST00000466708 SAMD9Q5K651 1589 aa31.08■■■□□ 2.57
CCDC78-207ENST00000466708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.06■■■□□ 2.56
CCDC78-207ENST00000466708 P3H3Q8IVL6 736 aa31.06■■■□□ 2.56
CCDC78-207ENST00000466708 FMN1Q68DA7 1419 aa31.05■■■□□ 2.56
CCDC78-207ENST00000466708 CCER1Q8TC90 406 aaPredicted RBP31.05■■■□□ 2.56
CCDC78-207ENST00000466708 FYCO1Q9BQS8 1478 aa31.05■■■□□ 2.56
CCDC78-207ENST00000466708 PCF11O94913 1555 aaKnown RBP31.04■■■□□ 2.56
CCDC78-207ENST00000466708 CASKIN1Q8WXD9 1431 aa31.02■■■□□ 2.56
CCDC78-207ENST00000466708 EIF4G3O43432 1585 aaKnown RBP31.02■■■□□ 2.56
CCDC78-207ENST00000466708 CFAP43Q8NDM7 1665 aa31■■■□□ 2.55
CCDC78-207ENST00000466708 RRBP1Q9P2E9 1410 aaKnown RBP30.99■■■□□ 2.55
CCDC78-207ENST00000466708 LRRC9Q6ZRR7 1453 aa30.96■■■□□ 2.55
CCDC78-207ENST00000466708 IQGAP2Q13576 1575 aa30.95■■■□□ 2.55
CCDC78-207ENST00000466708 HNRNPUL2Q1KMD3 747 aaKnown RBP30.94■■■□□ 2.54
CCDC78-207ENST00000466708 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
CCDC78-207ENST00000466708 MAGI1Q96QZ7 1491 aaPredicted RBP30.9■■■□□ 2.54
CCDC78-207ENST00000466708 CCNB3Q8WWL7 1395 aa30.84■■■□□ 2.53
CCDC78-207ENST00000466708 GRIN2AQ12879 1464 aa30.84■■■□□ 2.53
CCDC78-207ENST00000466708 ATP1B4Q9UN42 357 aaPredicted RBP30.83■■■□□ 2.53
CCDC78-207ENST00000466708 KIAA0586Q9BVV6 1533 aa30.82■■■□□ 2.52
CCDC78-207ENST00000466708 UGGT2Q9NYU1 1516 aa30.82■■■□□ 2.52
CCDC78-207ENST00000466708 SYNJ2O15056 1496 aa30.77■■■□□ 2.52
CCDC78-207ENST00000466708 PHLDB1Q86UU1 1377 aa30.69■■■□□ 2.5
CCDC78-207ENST00000466708 CHMP7Q8WUX9 453 aaPredicted RBP30.69■■■□□ 2.5
CCDC78-207ENST00000466708 LRRIQ1Q96JM4 1722 aa30.66■■■□□ 2.5
CCDC78-207ENST00000466708 CCDC18Q5T9S5 1454 aa30.65■■■□□ 2.5
CCDC78-207ENST00000466708 HECW1Q76N89 1606 aa30.64■■■□□ 2.49
CCDC78-207ENST00000466708 MTUS2Q5JR59 1369 aa30.62■■■□□ 2.49
CCDC78-207ENST00000466708 KIAA0556O60303 1618 aa30.61■■■□□ 2.49
CCDC78-207ENST00000466708 CEP170Q5SW79 1584 aa30.6■■■□□ 2.49
CCDC78-207ENST00000466708 DISP1Q96F81 1524 aa30.6■■■□□ 2.49
CCDC78-207ENST00000466708 NUP160Q12769 1436 aa30.59■■■□□ 2.49
CCDC78-207ENST00000466708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.58■■■□□ 2.49
CCDC78-207ENST00000466708 EHBP1L1Q8N3D4 1523 aa30.57■■■□□ 2.48
CCDC78-207ENST00000466708 FBLN2P98095 1184 aa30.52■■■□□ 2.48
CCDC78-207ENST00000466708 SUPT6HQ7KZ85 1726 aaKnown RBP30.51■■■□□ 2.47
CCDC78-207ENST00000466708 CLSPNQ9HAW4 1339 aa30.51■■■□□ 2.47
CCDC78-207ENST00000466708 EPRSP07814 1512 aaKnown RBP30.5■■■□□ 2.47
CCDC78-207ENST00000466708 NCOA2Q15596 1464 aa30.46■■■□□ 2.47
CCDC78-207ENST00000466708 FGD6Q6ZV73 1430 aa30.46■■■□□ 2.47
CCDC78-207ENST00000466708 FAM50AQ14320 339 aaKnown RBP30.45■■■□□ 2.47
CCDC78-207ENST00000466708 ITGAEP38570 1179 aa30.45■■■□□ 2.46
CCDC78-207ENST00000466708 CARMIL2Q6F5E8 1435 aa30.43■■■□□ 2.46
CCDC78-207ENST00000466708 DHX57Q6P158 1386 aaKnown RBP30.42■■■□□ 2.46
CCDC78-207ENST00000466708 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
CCDC78-207ENST00000466708 MAGI3Q5TCQ9 1506 aa30.41■■■□□ 2.46
CCDC78-207ENST00000466708 MYOM3Q5VTT5 1437 aa30.4■■■□□ 2.46
CCDC78-207ENST00000466708 JPH4Q96JJ6 628 aa30.4■■■□□ 2.46
CCDC78-207ENST00000466708 RAPGEF6Q8TEU7 1601 aa30.4■■■□□ 2.46
CCDC78-207ENST00000466708 CDK13Q14004 1512 aaKnown RBP30.36■■■□□ 2.45
CCDC78-207ENST00000466708 SETD5Q9C0A6 1442 aa30.36■■■□□ 2.45
CCDC78-207ENST00000466708 RAB3GAP2Q9H2M9 1393 aa30.33■■■□□ 2.45
CCDC78-207ENST00000466708 NUP153P49790 1475 aaKnown RBP30.33■■■□□ 2.45
CCDC78-207ENST00000466708 CDK11AQ9UQ88 783 aaPredicted RBP30.25■■■□□ 2.43
CCDC78-207ENST00000466708 CHD1O14646 1710 aa30.24■■■□□ 2.43
CCDC78-207ENST00000466708 PTPN23Q9H3S7 1636 aa30.24■■■□□ 2.43
CCDC78-207ENST00000466708 MIA2Q96PC5 1412 aa30.22■■■□□ 2.43
CCDC78-207ENST00000466708 TCOF1Q13428 1488 aaKnown RBP30.21■■■□□ 2.43
CCDC78-207ENST00000466708 PLB1Q6P1J6 1458 aa30.2■■■□□ 2.42
CCDC78-207ENST00000466708 ARID3CA6NKF2 412 aa30.16■■■□□ 2.42
CCDC78-207ENST00000466708 ABCA8O94911 1581 aa30.14■■■□□ 2.42
CCDC78-207ENST00000466708 PRG4Q92954 1404 aaPredicted RBP30.14■■■□□ 2.41
CCDC78-207ENST00000466708 HFM1A2PYH4 1435 aa30.11■■■□□ 2.41
CCDC78-207ENST00000466708 TROQ12816 1431 aaPredicted RBP30.11■■■□□ 2.41
CCDC78-207ENST00000466708 PTPRKQ15262 1439 aa30.1■■■□□ 2.41
CCDC78-207ENST00000466708 SHROOM2Q13796 1616 aa30.09■■■□□ 2.41
CCDC78-207ENST00000466708 MAPKBP1O60336 1514 aa30.05■■■□□ 2.4
CCDC78-207ENST00000466708 ADCY10Q96PN6 1610 aa30.04■■■□□ 2.4
CCDC78-207ENST00000466708 PTPRGP23470 1445 aa30.04■■■□□ 2.4
CCDC78-207ENST00000466708 ZNF316A6NFI3 1004 aaPredicted RBP30.03■■■□□ 2.4
CCDC78-207ENST00000466708 NAIPQ13075 1403 aa30■■■□□ 2.39
CCDC78-207ENST00000466708 AKNAQ7Z591 1439 aa29.99■■■□□ 2.39
CCDC78-207ENST00000466708 ATP10BO94823 1461 aa29.97■■■□□ 2.39
CCDC78-207ENST00000466708 ITSN2Q9NZM3 1697 aa29.96■■■□□ 2.39
CCDC78-207ENST00000466708 PLEKHD1A6NEE1 506 aa29.94■■■□□ 2.38
CCDC78-207ENST00000466708 GCC2Q8IWJ2 1684 aa29.92■■■□□ 2.38
CCDC78-207ENST00000466708 UACAQ9BZF9 1416 aa29.92■■■□□ 2.38
CCDC78-207ENST00000466708 CLASP1Q7Z460 1538 aa29.9■■■□□ 2.38
CCDC78-207ENST00000466708 KIF14Q15058 1648 aa29.9■■■□□ 2.38
CCDC78-207ENST00000466708 DNMT1P26358 1616 aaKnown RBP29.89■■■□□ 2.37
CCDC78-207ENST00000466708 GPATCH8Q9UKJ3 1502 aaKnown RBP29.88■■■□□ 2.37
CCDC78-207ENST00000466708 DIEXFQ68CQ4 756 aaKnown RBP29.88■■■□□ 2.37
CCDC78-207ENST00000466708 DAPK1P53355 1430 aa29.87■■■□□ 2.37
CCDC78-207ENST00000466708 ROCK1Q13464 1354 aa29.85■■■□□ 2.37
CCDC78-207ENST00000466708 CFDP1Q9UEE9 299 aaPredicted RBP29.84■■■□□ 2.37
CCDC78-207ENST00000466708 ACIN1Q9UKV3 1341 aaKnown RBP29.84■■■□□ 2.37
CCDC78-207ENST00000466708 TIMELESSQ9UNS1 1208 aa29.83■■■□□ 2.37
CCDC78-207ENST00000466708 CHIC2Q9UKJ5 165 aa29.82■■■□□ 2.36
CCDC78-207ENST00000466708 ABCC5O15440 1437 aa29.82■■■□□ 2.36
CCDC78-207ENST00000466708 RRP7BPQ9NSQ0 103 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms