RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 DIP2BQ9P265 1576 aa27.28■■□□□ 1.96
HMGXB4-206ENST00000466438 PRG4Q92954 1404 aaPredicted RBP27.28■■□□□ 1.96
HMGXB4-206ENST00000466438 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
HMGXB4-206ENST00000466438 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.94
HMGXB4-206ENST00000466438 JPH4Q96JJ6 628 aa27.17■■□□□ 1.94
HMGXB4-206ENST00000466438 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
HMGXB4-206ENST00000466438 ADCY10Q96PN6 1610 aa27.12■■□□□ 1.93
HMGXB4-206ENST00000466438 TSPOAP1O95153 1857 aa27.08■■□□□ 1.93
HMGXB4-206ENST00000466438 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
HMGXB4-206ENST00000466438 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
HMGXB4-206ENST00000466438 ADGRL1O94910 1474 aa27■■□□□ 1.91
HMGXB4-206ENST00000466438 TOP2BQ02880 1626 aa26.99■■□□□ 1.91
HMGXB4-206ENST00000466438 HECW2Q9P2P5 1572 aa26.94■■□□□ 1.9
HMGXB4-206ENST00000466438 PPRC1Q5VV67 1664 aaKnown RBP26.82■■□□□ 1.88
HMGXB4-206ENST00000466438 KIAA0586Q9BVV6 1533 aa26.8■■□□□ 1.88
HMGXB4-206ENST00000466438 GLI2P10070 1586 aa26.79■■□□□ 1.88
HMGXB4-206ENST00000466438 ABCC2Q92887 1545 aa26.74■■□□□ 1.87
HMGXB4-206ENST00000466438 PLB1Q6P1J6 1458 aa26.74■■□□□ 1.87
HMGXB4-206ENST00000466438 ASXL2Q76L83 1435 aa26.73■■□□□ 1.87
HMGXB4-206ENST00000466438 PTPRGP23470 1445 aa26.73■■□□□ 1.87
HMGXB4-206ENST00000466438 COL17A1Q9UMD9 1497 aaPredicted RBP26.71■■□□□ 1.87
HMGXB4-206ENST00000466438 FBXO41Q8TF61 875 aa26.68■■□□□ 1.86
HMGXB4-206ENST00000466438 TEX14Q8IWB6 1497 aa26.61■■□□□ 1.85
HMGXB4-206ENST00000466438 MAP3K4Q9Y6R4 1608 aa26.61■■□□□ 1.85
HMGXB4-206ENST00000466438 TNIKQ9UKE5 1360 aa26.6■■□□□ 1.85
HMGXB4-206ENST00000466438 CUL7Q14999 1698 aa26.6■■□□□ 1.85
HMGXB4-206ENST00000466438 UHRF1BP1LA0JNW5 1464 aa26.59■■□□□ 1.85
HMGXB4-206ENST00000466438 TTBK1Q5TCY1 1321 aaPredicted RBP26.59■■□□□ 1.85
HMGXB4-206ENST00000466438 EPRSP07814 1512 aaKnown RBP26.57■■□□□ 1.84
HMGXB4-206ENST00000466438 CARMIL2Q6F5E8 1435 aa26.56■■□□□ 1.84
HMGXB4-206ENST00000466438 IGF1RP08069 1367 aa26.54■■□□□ 1.84
HMGXB4-206ENST00000466438 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
HMGXB4-206ENST00000466438 KDM5BQ9UGL1 1544 aa26.47■■□□□ 1.83
HMGXB4-206ENST00000466438 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
HMGXB4-206ENST00000466438 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
HMGXB4-206ENST00000466438 IQGAP2Q13576 1575 aa26.41■■□□□ 1.82
HMGXB4-206ENST00000466438 ZCCHC11Q5TAX3 1644 aaKnown RBP26.39■■□□□ 1.82
HMGXB4-206ENST00000466438 DISP1Q96F81 1524 aa26.35■■□□□ 1.81
HMGXB4-206ENST00000466438 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
HMGXB4-206ENST00000466438 WDR7Q9Y4E6 1490 aa26.33■■□□□ 1.81
HMGXB4-206ENST00000466438 MAGI3Q5TCQ9 1506 aa26.3■■□□□ 1.8
HMGXB4-206ENST00000466438 KIF21BO75037 1637 aa26.3■■□□□ 1.8
HMGXB4-206ENST00000466438 LMTK3Q96Q04 1460 aa26.25■■□□□ 1.79
HMGXB4-206ENST00000466438 CD109Q6YHK3 1445 aa26.25■■□□□ 1.79
HMGXB4-206ENST00000466438 CFAP43Q8NDM7 1665 aa26.25■■□□□ 1.79
HMGXB4-206ENST00000466438 UGGT2Q9NYU1 1516 aa26.21■■□□□ 1.79
HMGXB4-206ENST00000466438 PTPRMP28827 1452 aa26.21■■□□□ 1.79
HMGXB4-206ENST00000466438 KIAA0556O60303 1618 aa26.18■■□□□ 1.78
HMGXB4-206ENST00000466438 ADAMTSL3P82987 1691 aa26.16■■□□□ 1.78
HMGXB4-206ENST00000466438 PCF11O94913 1555 aaKnown RBP26.14■■□□□ 1.78
HMGXB4-206ENST00000466438 ARAP3Q8WWN8 1544 aa26.12■■□□□ 1.77
HMGXB4-206ENST00000466438 KCNH8Q96L42 1107 aa26.09■■□□□ 1.77
HMGXB4-206ENST00000466438 ABCA8O94911 1581 aa26.01■■□□□ 1.75
HMGXB4-206ENST00000466438 BCORL1Q5H9F3 1711 aa26■■□□□ 1.75
HMGXB4-206ENST00000466438 RAPGEF2Q9Y4G8 1499 aa26■■□□□ 1.75
HMGXB4-206ENST00000466438 MADDQ8WXG6 1647 aa25.99■■□□□ 1.75
HMGXB4-206ENST00000466438 SOCS7O14512 581 aa25.99■■□□□ 1.75
HMGXB4-206ENST00000466438 PHLDB1Q86UU1 1377 aa25.97■■□□□ 1.75
HMGXB4-206ENST00000466438 ILDR2Q71H61 639 aa25.94■■□□□ 1.74
HMGXB4-206ENST00000466438 CERKQ8TCT0 537 aa25.93■■□□□ 1.74
HMGXB4-206ENST00000466438 DISP3Q9P2K9 1392 aa25.92■■□□□ 1.74
HMGXB4-206ENST00000466438 GOLGA3Q08378 1498 aa25.91■■□□□ 1.74
HMGXB4-206ENST00000466438 ARID4BQ4LE39 1312 aaPredicted RBP25.88■■□□□ 1.73
HMGXB4-206ENST00000466438 RAPGEF3O95398 923 aa25.88■■□□□ 1.73
HMGXB4-206ENST00000466438 ABCA9Q8IUA7 1624 aa25.86■■□□□ 1.73
HMGXB4-206ENST00000466438 HSPA2P54652 639 aa25.86■■□□□ 1.73
HMGXB4-206ENST00000466438 RIMS1Q86UR5 1692 aaKnown RBP25.86■■□□□ 1.73
HMGXB4-206ENST00000466438 NEO1Q92859 1461 aa25.85■■□□□ 1.73
HMGXB4-206ENST00000466438 CTTNBP2Q8WZ74 1663 aa25.84■■□□□ 1.73
HMGXB4-206ENST00000466438 FRMPD1Q5SYB0 1578 aa25.84■■□□□ 1.73
HMGXB4-206ENST00000466438 ARHGEF40Q8TER5 1519 aa25.78■■□□□ 1.72
HMGXB4-206ENST00000466438 ATP10BO94823 1461 aa25.77■■□□□ 1.72
HMGXB4-206ENST00000466438 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
HMGXB4-206ENST00000466438 SPATA31D1Q6ZQQ2 1576 aa25.69■■□□□ 1.7
HMGXB4-206ENST00000466438 POGZQ7Z3K3 1410 aa25.69■■□□□ 1.7
HMGXB4-206ENST00000466438 PLPPR3Q6T4P5 718 aa25.68■■□□□ 1.7
HMGXB4-206ENST00000466438 FAM9AQ8IZU1 332 aaPredicted RBP25.67■■□□□ 1.7
HMGXB4-206ENST00000466438 FANCAO15360 1455 aa25.66■■□□□ 1.7
HMGXB4-206ENST00000466438 RICTORQ6R327 1708 aa25.64■■□□□ 1.7
HMGXB4-206ENST00000466438 DENND4BO75064 1496 aaPredicted RBP25.64■■□□□ 1.69
HMGXB4-206ENST00000466438 AKNAQ7Z591 1439 aa25.63■■□□□ 1.69
HMGXB4-206ENST00000466438 FHOD3Q2V2M9 1422 aa25.62■■□□□ 1.69
HMGXB4-206ENST00000466438 TTC37Q6PGP7 1564 aa25.6■■□□□ 1.69
HMGXB4-206ENST00000466438 ZMYM4Q5VZL5 1548 aa25.58■■□□□ 1.68
HMGXB4-206ENST00000466438 SIGLEC1Q9BZZ2 1709 aa25.57■■□□□ 1.68
HMGXB4-206ENST00000466438 FER1L4A9Z1Z3 1794 aa25.56■■□□□ 1.68
HMGXB4-206ENST00000466438 YEATS2Q9ULM3 1422 aa25.55■■□□□ 1.68
HMGXB4-206ENST00000466438 EFCAB5A4FU69 1503 aa25.55■■□□□ 1.68
HMGXB4-206ENST00000466438 ZFYVE16Q7Z3T8 1539 aa25.55■■□□□ 1.68
HMGXB4-206ENST00000466438 PREX1Q8TCU6 1659 aa25.54■■□□□ 1.68
HMGXB4-206ENST00000466438 CFAP74Q9C0B2 1584 aa25.53■■□□□ 1.68
HMGXB4-206ENST00000466438 RAPGEF6Q8TEU7 1601 aa25.53■■□□□ 1.68
HMGXB4-206ENST00000466438 DMRT2Q9Y5R5 561 aa25.53■■□□□ 1.68
HMGXB4-206ENST00000466438 P3H3Q8IVL6 736 aa25.52■■□□□ 1.68
HMGXB4-206ENST00000466438 MAGI2Q86UL8 1455 aa25.51■■□□□ 1.67
HMGXB4-206ENST00000466438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.5■■□□□ 1.67
HMGXB4-206ENST00000466438 HNRNPUL2Q1KMD3 747 aaKnown RBP25.5■■□□□ 1.67
HMGXB4-206ENST00000466438 PRXQ9BXM0 1461 aa25.5■■□□□ 1.67
HMGXB4-206ENST00000466438 MLECQ14165 292 aa25.49■■□□□ 1.67
HMGXB4-206ENST00000466438 STRCQ7RTU9 1775 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms