RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
ABCF3-205ENST00000466416 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
ABCF3-205ENST00000466416 KDM6BO15054 1643 aa16.88■□□□□ 0.29
ABCF3-205ENST00000466416 DIP2BQ9P265 1576 aa16.86■□□□□ 0.29
ABCF3-205ENST00000466416 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
ABCF3-205ENST00000466416 ADCY10Q96PN6 1610 aa16.77■□□□□ 0.27
ABCF3-205ENST00000466416 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
ABCF3-205ENST00000466416 TSPOAP1O95153 1857 aa16.73■□□□□ 0.27
ABCF3-205ENST00000466416 BIVM-ERCC5R4GMW8 1640 aa16.72■□□□□ 0.27
ABCF3-205ENST00000466416 ADGRL1O94910 1474 aa16.72■□□□□ 0.27
ABCF3-205ENST00000466416 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
ABCF3-205ENST00000466416 KIAA0586Q9BVV6 1533 aa16.68■□□□□ 0.26
ABCF3-205ENST00000466416 PTPRGP23470 1445 aa16.66■□□□□ 0.26
ABCF3-205ENST00000466416 PLB1Q6P1J6 1458 aa16.64■□□□□ 0.25
ABCF3-205ENST00000466416 HECW2Q9P2P5 1572 aa16.64■□□□□ 0.25
ABCF3-205ENST00000466416 GLI2P10070 1586 aa16.62■□□□□ 0.25
ABCF3-205ENST00000466416 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
ABCF3-205ENST00000466416 ABCC2Q92887 1545 aa16.6■□□□□ 0.25
ABCF3-205ENST00000466416 FBXO41Q8TF61 875 aa16.6■□□□□ 0.25
ABCF3-205ENST00000466416 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.24
ABCF3-205ENST00000466416 COL17A1Q9UMD9 1497 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-205ENST00000466416 TTBK1Q5TCY1 1321 aaPredicted RBP16.57■□□□□ 0.24
ABCF3-205ENST00000466416 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
ABCF3-205ENST00000466416 IGF1RP08069 1367 aa16.56■□□□□ 0.24
ABCF3-205ENST00000466416 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
ABCF3-205ENST00000466416 TEX14Q8IWB6 1497 aa16.54■□□□□ 0.24
ABCF3-205ENST00000466416 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
ABCF3-205ENST00000466416 UHRF1BP1LA0JNW5 1464 aa16.53■□□□□ 0.24
ABCF3-205ENST00000466416 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
ABCF3-205ENST00000466416 UACAQ9BZF9 1416 aa16.49■□□□□ 0.23
ABCF3-205ENST00000466416 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
ABCF3-205ENST00000466416 CUL7Q14999 1698 aa16.46■□□□□ 0.23
ABCF3-205ENST00000466416 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
ABCF3-205ENST00000466416 KDM5BQ9UGL1 1544 aa16.45■□□□□ 0.22
ABCF3-205ENST00000466416 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
ABCF3-205ENST00000466416 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
ABCF3-205ENST00000466416 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
ABCF3-205ENST00000466416 CD109Q6YHK3 1445 aa16.35■□□□□ 0.21
ABCF3-205ENST00000466416 WDR7Q9Y4E6 1490 aa16.35■□□□□ 0.21
ABCF3-205ENST00000466416 MAGI3Q5TCQ9 1506 aa16.35■□□□□ 0.21
ABCF3-205ENST00000466416 ZCCHC11Q5TAX3 1644 aaKnown RBP16.33■□□□□ 0.2
ABCF3-205ENST00000466416 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
ABCF3-205ENST00000466416 UGGT2Q9NYU1 1516 aa16.28■□□□□ 0.2
ABCF3-205ENST00000466416 PTPRMP28827 1452 aa16.27■□□□□ 0.19
ABCF3-205ENST00000466416 LMTK3Q96Q04 1460 aa16.27■□□□□ 0.19
ABCF3-205ENST00000466416 CFAP43Q8NDM7 1665 aa16.25■□□□□ 0.19
ABCF3-205ENST00000466416 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
ABCF3-205ENST00000466416 KIF21BO75037 1637 aa16.23■□□□□ 0.19
ABCF3-205ENST00000466416 KIAA0556O60303 1618 aa16.22■□□□□ 0.19
ABCF3-205ENST00000466416 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
ABCF3-205ENST00000466416 ADAMTSL3P82987 1691 aa16.19■□□□□ 0.18
ABCF3-205ENST00000466416 RAPGEF2Q9Y4G8 1499 aa16.19■□□□□ 0.18
ABCF3-205ENST00000466416 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
ABCF3-205ENST00000466416 SOCS7O14512 581 aa16.16■□□□□ 0.18
ABCF3-205ENST00000466416 CERKQ8TCT0 537 aa16.15■□□□□ 0.18
ABCF3-205ENST00000466416 ARID4BQ4LE39 1312 aaPredicted RBP16.15■□□□□ 0.18
ABCF3-205ENST00000466416 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
ABCF3-205ENST00000466416 GOLGA3Q08378 1498 aa16.14■□□□□ 0.17
ABCF3-205ENST00000466416 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
ABCF3-205ENST00000466416 ABCA8O94911 1581 aa16.13■□□□□ 0.17
ABCF3-205ENST00000466416 ILDR2Q71H61 639 aa16.1■□□□□ 0.17
ABCF3-205ENST00000466416 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
ABCF3-205ENST00000466416 BCORL1Q5H9F3 1711 aa16.08■□□□□ 0.17
ABCF3-205ENST00000466416 HSPA2P54652 639 aa16.08■□□□□ 0.16
ABCF3-205ENST00000466416 NEO1Q92859 1461 aa16.07■□□□□ 0.16
ABCF3-205ENST00000466416 MADDQ8WXG6 1647 aa16.06■□□□□ 0.16
ABCF3-205ENST00000466416 ATP10BO94823 1461 aa16.03■□□□□ 0.16
ABCF3-205ENST00000466416 ABCA9Q8IUA7 1624 aa16.02■□□□□ 0.16
ABCF3-205ENST00000466416 ARID3CA6NKF2 412 aa16.02■□□□□ 0.16
ABCF3-205ENST00000466416 POGZQ7Z3K3 1410 aa16■□□□□ 0.15
ABCF3-205ENST00000466416 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
ABCF3-205ENST00000466416 RIMS1Q86UR5 1692 aaKnown RBP15.98■□□□□ 0.15
ABCF3-205ENST00000466416 CTTNBP2Q8WZ74 1663 aa15.97■□□□□ 0.15
ABCF3-205ENST00000466416 FRMPD1Q5SYB0 1578 aa15.96■□□□□ 0.15
ABCF3-205ENST00000466416 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
ABCF3-205ENST00000466416 DENND4BO75064 1496 aaPredicted RBP15.96■□□□□ 0.14
ABCF3-205ENST00000466416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
ABCF3-205ENST00000466416 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
ABCF3-205ENST00000466416 FANCAO15360 1455 aa15.94■□□□□ 0.14
ABCF3-205ENST00000466416 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
ABCF3-205ENST00000466416 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
ABCF3-205ENST00000466416 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
ABCF3-205ENST00000466416 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
ABCF3-205ENST00000466416 YEATS2Q9ULM3 1422 aa15.91■□□□□ 0.14
ABCF3-205ENST00000466416 MLECQ14165 292 aa15.89■□□□□ 0.13
ABCF3-205ENST00000466416 PLEKHD1A6NEE1 506 aa15.88■□□□□ 0.13
ABCF3-205ENST00000466416 MAGI2Q86UL8 1455 aa15.87■□□□□ 0.13
ABCF3-205ENST00000466416 PRXQ9BXM0 1461 aa15.87■□□□□ 0.13
ABCF3-205ENST00000466416 RICTORQ6R327 1708 aa15.85■□□□□ 0.13
ABCF3-205ENST00000466416 EFCAB5A4FU69 1503 aa15.84■□□□□ 0.13
ABCF3-205ENST00000466416 ZMYM4Q5VZL5 1548 aa15.84■□□□□ 0.13
ABCF3-205ENST00000466416 SPATA31D1Q6ZQQ2 1576 aa15.84■□□□□ 0.13
ABCF3-205ENST00000466416 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
ABCF3-205ENST00000466416 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.13
ABCF3-205ENST00000466416 RAPGEF6Q8TEU7 1601 aa15.83■□□□□ 0.12
ABCF3-205ENST00000466416 CFAP74Q9C0B2 1584 aa15.81■□□□□ 0.12
ABCF3-205ENST00000466416 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
ABCF3-205ENST00000466416 CEBPAP49715 358 aaPredicted RBP15.8■□□□□ 0.12
ABCF3-205ENST00000466416 PTPRTO14522 1441 aa15.79■□□□□ 0.12
ABCF3-205ENST00000466416 FER1L4A9Z1Z3 1794 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms