RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 FAM69CQ0P6D2 419 aa18.36■□□□□ 0.53
GPNMB-206ENST00000465673 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
GPNMB-206ENST00000465673 NPM1P06748 294 aaKnown RBP eCLIP18.31■□□□□ 0.52
GPNMB-206ENST00000465673 ABCC10Q5T3U5 1492 aa18.3■□□□□ 0.52
GPNMB-206ENST00000465673 IGF1RP08069 1367 aa18.29■□□□□ 0.52
GPNMB-206ENST00000465673 ADCY10Q96PN6 1610 aa18.28■□□□□ 0.52
GPNMB-206ENST00000465673 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
GPNMB-206ENST00000465673 MAPKBP1O60336 1514 aa18.24■□□□□ 0.51
GPNMB-206ENST00000465673 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
GPNMB-206ENST00000465673 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
GPNMB-206ENST00000465673 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
GPNMB-206ENST00000465673 PTPRGP23470 1445 aa18.16■□□□□ 0.5
GPNMB-206ENST00000465673 TSPOAP1O95153 1857 aa18.16■□□□□ 0.5
GPNMB-206ENST00000465673 KDM4FA0A1W2PPD8 638 aa18.16■□□□□ 0.5
GPNMB-206ENST00000465673 CUL7Q14999 1698 aa18.15■□□□□ 0.5
GPNMB-206ENST00000465673 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
GPNMB-206ENST00000465673 KDM6BO15054 1643 aa18.14■□□□□ 0.49
GPNMB-206ENST00000465673 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.49
GPNMB-206ENST00000465673 ABCC2Q92887 1545 aa18.06■□□□□ 0.48
GPNMB-206ENST00000465673 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
GPNMB-206ENST00000465673 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
GPNMB-206ENST00000465673 IQGAP2Q13576 1575 aa18.03■□□□□ 0.48
GPNMB-206ENST00000465673 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
GPNMB-206ENST00000465673 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
GPNMB-206ENST00000465673 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
GPNMB-206ENST00000465673 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
GPNMB-206ENST00000465673 UHRF1BP1LA0JNW5 1464 aa17.97■□□□□ 0.47
GPNMB-206ENST00000465673 COL17A1Q9UMD9 1497 aaPredicted RBP17.97■□□□□ 0.47
GPNMB-206ENST00000465673 GLI2P10070 1586 aa17.96■□□□□ 0.47
GPNMB-206ENST00000465673 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
GPNMB-206ENST00000465673 RAPGEF2Q9Y4G8 1499 aa17.92■□□□□ 0.46
GPNMB-206ENST00000465673 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
GPNMB-206ENST00000465673 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
GPNMB-206ENST00000465673 ADGRL1O94910 1474 aa17.9■□□□□ 0.46
GPNMB-206ENST00000465673 ZCCHC11Q5TAX3 1644 aaKnown RBP17.89■□□□□ 0.45
GPNMB-206ENST00000465673 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
GPNMB-206ENST00000465673 MAP3K4Q9Y6R4 1608 aa17.87■□□□□ 0.45
GPNMB-206ENST00000465673 ILDR1Q86SU0 546 aaPredicted RBP17.84■□□□□ 0.45
GPNMB-206ENST00000465673 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
GPNMB-206ENST00000465673 TEX14Q8IWB6 1497 aa17.82■□□□□ 0.44
GPNMB-206ENST00000465673 WDR7Q9Y4E6 1490 aa17.81■□□□□ 0.44
GPNMB-206ENST00000465673 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
GPNMB-206ENST00000465673 CD109Q6YHK3 1445 aa17.75■□□□□ 0.43
GPNMB-206ENST00000465673 ABCA8O94911 1581 aa17.74■□□□□ 0.43
GPNMB-206ENST00000465673 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
GPNMB-206ENST00000465673 P3H3Q8IVL6 736 aa17.73■□□□□ 0.43
GPNMB-206ENST00000465673 HECW2Q9P2P5 1572 aa17.72■□□□□ 0.43
GPNMB-206ENST00000465673 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
GPNMB-206ENST00000465673 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
GPNMB-206ENST00000465673 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
GPNMB-206ENST00000465673 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
GPNMB-206ENST00000465673 ATP10BO94823 1461 aa17.63■□□□□ 0.41
GPNMB-206ENST00000465673 KIF21BO75037 1637 aa17.62■□□□□ 0.41
GPNMB-206ENST00000465673 RAPGEF3O95398 923 aa17.58■□□□□ 0.4
GPNMB-206ENST00000465673 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
GPNMB-206ENST00000465673 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
GPNMB-206ENST00000465673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
GPNMB-206ENST00000465673 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
GPNMB-206ENST00000465673 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
GPNMB-206ENST00000465673 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
GPNMB-206ENST00000465673 ABCA9Q8IUA7 1624 aa17.52■□□□□ 0.4
GPNMB-206ENST00000465673 SAMD9Q5K651 1589 aa17.5■□□□□ 0.39
GPNMB-206ENST00000465673 RAPGEF6Q8TEU7 1601 aa17.49■□□□□ 0.39
GPNMB-206ENST00000465673 PTPRMP28827 1452 aa17.48■□□□□ 0.39
GPNMB-206ENST00000465673 NUP153P49790 1475 aaKnown RBP17.47■□□□□ 0.39
GPNMB-206ENST00000465673 ADAMTSL3P82987 1691 aa17.46■□□□□ 0.39
GPNMB-206ENST00000465673 PHLDB1Q86UU1 1377 aa17.46■□□□□ 0.39
GPNMB-206ENST00000465673 FHOD3Q2V2M9 1422 aa17.46■□□□□ 0.39
GPNMB-206ENST00000465673 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.38
GPNMB-206ENST00000465673 FRMPD1Q5SYB0 1578 aa17.45■□□□□ 0.38
GPNMB-206ENST00000465673 NEO1Q92859 1461 aa17.45■□□□□ 0.38
GPNMB-206ENST00000465673 PLEKHD1A6NEE1 506 aa17.4■□□□□ 0.38
GPNMB-206ENST00000465673 MADDQ8WXG6 1647 aa17.39■□□□□ 0.38
GPNMB-206ENST00000465673 BCORL1Q5H9F3 1711 aa17.39■□□□□ 0.37
GPNMB-206ENST00000465673 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
GPNMB-206ENST00000465673 FBXO41Q8TF61 875 aa17.38■□□□□ 0.37
GPNMB-206ENST00000465673 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
GPNMB-206ENST00000465673 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
GPNMB-206ENST00000465673 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
GPNMB-206ENST00000465673 FANCAO15360 1455 aa17.34■□□□□ 0.37
GPNMB-206ENST00000465673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
GPNMB-206ENST00000465673 LMTK3Q96Q04 1460 aa17.34■□□□□ 0.37
GPNMB-206ENST00000465673 RICTORQ6R327 1708 aa17.33■□□□□ 0.37
GPNMB-206ENST00000465673 ARHGEF40Q8TER5 1519 aa17.33■□□□□ 0.37
GPNMB-206ENST00000465673 HSPA2P54652 639 aa17.33■□□□□ 0.36
GPNMB-206ENST00000465673 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
GPNMB-206ENST00000465673 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
GPNMB-206ENST00000465673 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
GPNMB-206ENST00000465673 YEATS2Q9ULM3 1422 aa17.31■□□□□ 0.36
GPNMB-206ENST00000465673 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
GPNMB-206ENST00000465673 EEA1Q15075 1411 aa17.3■□□□□ 0.36
GPNMB-206ENST00000465673 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
GPNMB-206ENST00000465673 MLECQ14165 292 aa17.3■□□□□ 0.36
GPNMB-206ENST00000465673 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
GPNMB-206ENST00000465673 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
GPNMB-206ENST00000465673 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
GPNMB-206ENST00000465673 EFCAB5A4FU69 1503 aa17.25■□□□□ 0.35
GPNMB-206ENST00000465673 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
GPNMB-206ENST00000465673 HECW1Q76N89 1606 aa17.25■□□□□ 0.35
GPNMB-206ENST00000465673 CFAP74Q9C0B2 1584 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms