RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 EFCAB5A4FU69 1503 aa33.3■■■□□ 2.92
PDLIM2-216ENST00000464275 AQRO60306 1485 aaKnown RBP eCLIP33.23■■■□□ 2.91
PDLIM2-216ENST00000464275 ADAMTS12P58397 1594 aa33.22■■■□□ 2.91
PDLIM2-216ENST00000464275 GRIN2BQ13224 1484 aa33.21■■■□□ 2.91
PDLIM2-216ENST00000464275 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
PDLIM2-216ENST00000464275 MAP3K1Q13233 1512 aa33.16■■■□□ 2.9
PDLIM2-216ENST00000464275 ZNF608Q9ULD9 1512 aaPredicted RBP33.14■■■□□ 2.9
PDLIM2-216ENST00000464275 SAMD9Q5K651 1589 aa33.11■■■□□ 2.89
PDLIM2-216ENST00000464275 EIF4G3O43432 1585 aaKnown RBP33.1■■■□□ 2.89
PDLIM2-216ENST00000464275 TIAM1Q13009 1591 aa33.1■■■□□ 2.89
PDLIM2-216ENST00000464275 PCF11O94913 1555 aaKnown RBP33.08■■■□□ 2.89
PDLIM2-216ENST00000464275 KANK4Q5T7N3 995 aaPredicted RBP33.07■■■□□ 2.88
PDLIM2-216ENST00000464275 FHOD3Q2V2M9 1422 aa33.06■■■□□ 2.88
PDLIM2-216ENST00000464275 CFAP43Q8NDM7 1665 aa33.05■■■□□ 2.88
PDLIM2-216ENST00000464275 P3H3Q8IVL6 736 aa33.03■■■□□ 2.88
PDLIM2-216ENST00000464275 FYCO1Q9BQS8 1478 aa33■■■□□ 2.87
PDLIM2-216ENST00000464275 FMN1Q68DA7 1419 aa32.96■■■□□ 2.87
PDLIM2-216ENST00000464275 IQGAP2Q13576 1575 aa32.96■■■□□ 2.87
PDLIM2-216ENST00000464275 CASKIN1Q8WXD9 1431 aa32.96■■■□□ 2.87
PDLIM2-216ENST00000464275 SNAPC4Q5SXM2 1469 aa32.94■■■□□ 2.86
PDLIM2-216ENST00000464275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.93■■■□□ 2.86
PDLIM2-216ENST00000464275 LRRC9Q6ZRR7 1453 aa32.9■■■□□ 2.86
PDLIM2-216ENST00000464275 CCER1Q8TC90 406 aaPredicted RBP32.89■■■□□ 2.86
PDLIM2-216ENST00000464275 RRBP1Q9P2E9 1410 aaKnown RBP32.88■■■□□ 2.85
PDLIM2-216ENST00000464275 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
PDLIM2-216ENST00000464275 HNRNPUL2Q1KMD3 747 aaKnown RBP32.83■■■□□ 2.85
PDLIM2-216ENST00000464275 GRIN2AQ12879 1464 aa32.82■■■□□ 2.85
PDLIM2-216ENST00000464275 UGGT2Q9NYU1 1516 aa32.79■■■□□ 2.84
PDLIM2-216ENST00000464275 LRRIQ1Q96JM4 1722 aa32.78■■■□□ 2.84
PDLIM2-216ENST00000464275 KIAA0586Q9BVV6 1533 aa32.77■■■□□ 2.84
PDLIM2-216ENST00000464275 ATP1B4Q9UN42 357 aaPredicted RBP32.76■■■□□ 2.83
PDLIM2-216ENST00000464275 SYNJ2O15056 1496 aa32.75■■■□□ 2.83
PDLIM2-216ENST00000464275 CCNB3Q8WWL7 1395 aa32.72■■■□□ 2.83
PDLIM2-216ENST00000464275 CEP170Q5SW79 1584 aa32.63■■■□□ 2.81
PDLIM2-216ENST00000464275 HECW1Q76N89 1606 aa32.63■■■□□ 2.81
PDLIM2-216ENST00000464275 KIAA0556O60303 1618 aa32.63■■■□□ 2.81
PDLIM2-216ENST00000464275 CHMP7Q8WUX9 453 aaPredicted RBP32.62■■■□□ 2.81
PDLIM2-216ENST00000464275 PHLDB1Q86UU1 1377 aa32.59■■■□□ 2.81
PDLIM2-216ENST00000464275 CCDC18Q5T9S5 1454 aa32.58■■■□□ 2.81
PDLIM2-216ENST00000464275 DISP1Q96F81 1524 aa32.56■■■□□ 2.8
PDLIM2-216ENST00000464275 NUP160Q12769 1436 aa32.54■■■□□ 2.8
PDLIM2-216ENST00000464275 EHBP1L1Q8N3D4 1523 aa32.51■■■□□ 2.8
PDLIM2-216ENST00000464275 MTUS2Q5JR59 1369 aa32.51■■■□□ 2.8
PDLIM2-216ENST00000464275 SUPT6HQ7KZ85 1726 aaKnown RBP32.51■■■□□ 2.79
PDLIM2-216ENST00000464275 FBLN2P98095 1184 aa32.47■■■□□ 2.79
PDLIM2-216ENST00000464275 EPRSP07814 1512 aaKnown RBP32.44■■■□□ 2.78
PDLIM2-216ENST00000464275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.42■■■□□ 2.78
PDLIM2-216ENST00000464275 RAPGEF6Q8TEU7 1601 aa32.4■■■□□ 2.78
PDLIM2-216ENST00000464275 MAGI3Q5TCQ9 1506 aa32.38■■■□□ 2.77
PDLIM2-216ENST00000464275 NCOA2Q15596 1464 aa32.38■■■□□ 2.77
PDLIM2-216ENST00000464275 CHD1O14646 1710 aa32.37■■■□□ 2.77
PDLIM2-216ENST00000464275 FGD6Q6ZV73 1430 aa32.35■■■□□ 2.77
PDLIM2-216ENST00000464275 CARMIL2Q6F5E8 1435 aa32.34■■■□□ 2.77
PDLIM2-216ENST00000464275 ITGAEP38570 1179 aa32.34■■■□□ 2.77
PDLIM2-216ENST00000464275 ARHGEF11O15085 1522 aa32.34■■■□□ 2.77
PDLIM2-216ENST00000464275 FAM50AQ14320 339 aaKnown RBP32.33■■■□□ 2.77
PDLIM2-216ENST00000464275 CDK13Q14004 1512 aaKnown RBP32.32■■■□□ 2.77
PDLIM2-216ENST00000464275 JPH4Q96JJ6 628 aa32.3■■■□□ 2.76
PDLIM2-216ENST00000464275 MYOM3Q5VTT5 1437 aa32.29■■■□□ 2.76
PDLIM2-216ENST00000464275 DHX57Q6P158 1386 aaKnown RBP32.28■■■□□ 2.76
PDLIM2-216ENST00000464275 CLSPNQ9HAW4 1339 aa32.27■■■□□ 2.76
PDLIM2-216ENST00000464275 NUP153P49790 1475 aaKnown RBP32.25■■■□□ 2.75
PDLIM2-216ENST00000464275 SETD5Q9C0A6 1442 aa32.21■■■□□ 2.75
PDLIM2-216ENST00000464275 PTPN23Q9H3S7 1636 aa32.2■■■□□ 2.75
PDLIM2-216ENST00000464275 RAB3GAP2Q9H2M9 1393 aa32.18■■■□□ 2.74
PDLIM2-216ENST00000464275 PLB1Q6P1J6 1458 aa32.13■■■□□ 2.73
PDLIM2-216ENST00000464275 TCOF1Q13428 1488 aaKnown RBP32.11■■■□□ 2.73
PDLIM2-216ENST00000464275 ABCA8O94911 1581 aa32.1■■■□□ 2.73
PDLIM2-216ENST00000464275 SHROOM2Q13796 1616 aa32.1■■■□□ 2.73
PDLIM2-216ENST00000464275 ARID3CA6NKF2 412 aa32.09■■■□□ 2.73
PDLIM2-216ENST00000464275 CDK11AQ9UQ88 783 aaPredicted RBP32.08■■■□□ 2.73
PDLIM2-216ENST00000464275 MIA2Q96PC5 1412 aa32.07■■■□□ 2.72
PDLIM2-216ENST00000464275 PRG4Q92954 1404 aaPredicted RBP32.06■■■□□ 2.72
PDLIM2-216ENST00000464275 ADCY10Q96PN6 1610 aa32.03■■■□□ 2.72
PDLIM2-216ENST00000464275 TROQ12816 1431 aaPredicted RBP32■■■□□ 2.71
PDLIM2-216ENST00000464275 PTPRKQ15262 1439 aa31.99■■■□□ 2.71
PDLIM2-216ENST00000464275 ITSN2Q9NZM3 1697 aa31.95■■■□□ 2.71
PDLIM2-216ENST00000464275 HFM1A2PYH4 1435 aa31.95■■■□□ 2.7
PDLIM2-216ENST00000464275 MAPKBP1O60336 1514 aa31.93■■■□□ 2.7
PDLIM2-216ENST00000464275 PTPRGP23470 1445 aa31.92■■■□□ 2.7
PDLIM2-216ENST00000464275 GCC2Q8IWJ2 1684 aa31.9■■■□□ 2.7
PDLIM2-216ENST00000464275 CLASP1Q7Z460 1538 aa31.89■■■□□ 2.7
PDLIM2-216ENST00000464275 KIF14Q15058 1648 aa31.88■■■□□ 2.69
PDLIM2-216ENST00000464275 ATP10BO94823 1461 aa31.87■■■□□ 2.69
PDLIM2-216ENST00000464275 NAIPQ13075 1403 aa31.85■■■□□ 2.69
PDLIM2-216ENST00000464275 AKNAQ7Z591 1439 aa31.83■■■□□ 2.69
PDLIM2-216ENST00000464275 DNMT1P26358 1616 aaKnown RBP31.82■■■□□ 2.69
PDLIM2-216ENST00000464275 ZNF316A6NFI3 1004 aaPredicted RBP31.8■■■□□ 2.68
PDLIM2-216ENST00000464275 PLEKHD1A6NEE1 506 aa31.78■■■□□ 2.68
PDLIM2-216ENST00000464275 ERCC6L2Q5T890 1561 aa31.78■■■□□ 2.68
PDLIM2-216ENST00000464275 CDC42BPAQ5VT25 1732 aa31.77■■■□□ 2.68
PDLIM2-216ENST00000464275 UACAQ9BZF9 1416 aa31.77■■■□□ 2.68
PDLIM2-216ENST00000464275 GPATCH8Q9UKJ3 1502 aaKnown RBP31.76■■■□□ 2.68
PDLIM2-216ENST00000464275 DAPK1P53355 1430 aa31.74■■■□□ 2.67
PDLIM2-216ENST00000464275 ABCC10Q5T3U5 1492 aa31.71■■■□□ 2.67
PDLIM2-216ENST00000464275 CAMSAP2Q08AD1 1489 aa31.7■■■□□ 2.67
PDLIM2-216ENST00000464275 ABCC2Q92887 1545 aa31.68■■■□□ 2.66
PDLIM2-216ENST00000464275 CHIC2Q9UKJ5 165 aa31.68■■■□□ 2.66
PDLIM2-216ENST00000464275 ABCC5O15440 1437 aa31.68■■■□□ 2.66
PDLIM2-216ENST00000464275 ROCK1Q13464 1354 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms