RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 KDM4FA0A1W2PPD8 638 aa27.81■■■□□ 2.04
APP-211ENST00000462267 MAPKBP1O60336 1514 aa27.8■■■□□ 2.04
APP-211ENST00000462267 TOP2BQ02880 1626 aa27.75■■■□□ 2.03
APP-211ENST00000462267 DIP2BQ9P265 1576 aa27.74■■■□□ 2.03
APP-211ENST00000462267 ILDR1Q86SU0 546 aaPredicted RBP27.73■■■□□ 2.03
APP-211ENST00000462267 BIVM-ERCC5R4GMW8 1640 aa27.73■■■□□ 2.03
APP-211ENST00000462267 KDM6BO15054 1643 aa27.7■■■□□ 2.03
APP-211ENST00000462267 ADCY10Q96PN6 1610 aa27.64■■■□□ 2.02
APP-211ENST00000462267 RUSC2Q8N2Y8 1516 aa27.64■■■□□ 2.02
APP-211ENST00000462267 TSPOAP1O95153 1857 aa27.53■■■□□ 2
APP-211ENST00000462267 KIAA0586Q9BVV6 1533 aa27.5■■□□□ 1.99
APP-211ENST00000462267 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
APP-211ENST00000462267 PTPRGP23470 1445 aa27.41■■□□□ 1.98
APP-211ENST00000462267 ADGRL1O94910 1474 aa27.38■■□□□ 1.97
APP-211ENST00000462267 PLB1Q6P1J6 1458 aa27.34■■□□□ 1.97
APP-211ENST00000462267 ABCC2Q92887 1545 aa27.34■■□□□ 1.97
APP-211ENST00000462267 IGF1RP08069 1367 aa27.34■■□□□ 1.97
APP-211ENST00000462267 GLI2P10070 1586 aa27.33■■□□□ 1.97
APP-211ENST00000462267 ASXL2Q76L83 1435 aa27.31■■□□□ 1.96
APP-211ENST00000462267 TNIKQ9UKE5 1360 aa27.29■■□□□ 1.96
APP-211ENST00000462267 PPRC1Q5VV67 1664 aaKnown RBP27.27■■□□□ 1.96
APP-211ENST00000462267 CARMIL2Q6F5E8 1435 aa27.27■■□□□ 1.96
APP-211ENST00000462267 TTBK1Q5TCY1 1321 aaPredicted RBP27.26■■□□□ 1.95
APP-211ENST00000462267 CUL7Q14999 1698 aa27.26■■□□□ 1.95
APP-211ENST00000462267 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
APP-211ENST00000462267 HECW2Q9P2P5 1572 aa27.22■■□□□ 1.95
APP-211ENST00000462267 UHRF1BP1LA0JNW5 1464 aa27.21■■□□□ 1.95
APP-211ENST00000462267 COL17A1Q9UMD9 1497 aaPredicted RBP27.21■■□□□ 1.95
APP-211ENST00000462267 TEX14Q8IWB6 1497 aa27.16■■□□□ 1.94
APP-211ENST00000462267 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
APP-211ENST00000462267 EPRSP07814 1512 aaKnown RBP27.14■■□□□ 1.94
APP-211ENST00000462267 CARMIL1Q5VZK9 1371 aa27.13■■□□□ 1.93
APP-211ENST00000462267 MAP3K4Q9Y6R4 1608 aa27.11■■□□□ 1.93
APP-211ENST00000462267 KDM5BQ9UGL1 1544 aa27.09■■□□□ 1.93
APP-211ENST00000462267 IQGAP2Q13576 1575 aa27.08■■□□□ 1.93
APP-211ENST00000462267 DISP1Q96F81 1524 aa27.02■■□□□ 1.92
APP-211ENST00000462267 FBXO41Q8TF61 875 aa26.97■■□□□ 1.91
APP-211ENST00000462267 ZCCHC11Q5TAX3 1644 aaKnown RBP26.95■■□□□ 1.91
APP-211ENST00000462267 WDR7Q9Y4E6 1490 aa26.92■■□□□ 1.9
APP-211ENST00000462267 UGGT2Q9NYU1 1516 aa26.9■■□□□ 1.9
APP-211ENST00000462267 MAGI3Q5TCQ9 1506 aa26.87■■□□□ 1.89
APP-211ENST00000462267 CD109Q6YHK3 1445 aa26.86■■□□□ 1.89
APP-211ENST00000462267 KIAA0556O60303 1618 aa26.83■■□□□ 1.88
APP-211ENST00000462267 RAPGEF2Q9Y4G8 1499 aa26.79■■□□□ 1.88
APP-211ENST00000462267 CFAP43Q8NDM7 1665 aa26.79■■□□□ 1.88
APP-211ENST00000462267 KCNH8Q96L42 1107 aa26.77■■□□□ 1.88
APP-211ENST00000462267 KIF21BO75037 1637 aa26.72■■□□□ 1.87
APP-211ENST00000462267 ARAP3Q8WWN8 1544 aa26.69■■□□□ 1.86
APP-211ENST00000462267 PTPRMP28827 1452 aa26.66■■□□□ 1.86
APP-211ENST00000462267 GOLGA3Q08378 1498 aa26.65■■□□□ 1.86
APP-211ENST00000462267 ABCA8O94911 1581 aa26.65■■□□□ 1.86
APP-211ENST00000462267 ADAMTSL3P82987 1691 aa26.6■■□□□ 1.85
APP-211ENST00000462267 PHLDB1Q86UU1 1377 aa26.6■■□□□ 1.85
APP-211ENST00000462267 PCF11O94913 1555 aaKnown RBP26.53■■□□□ 1.84
APP-211ENST00000462267 CTTNBP2Q8WZ74 1663 aa26.51■■□□□ 1.83
APP-211ENST00000462267 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
APP-211ENST00000462267 RAPGEF3O95398 923 aa26.49■■□□□ 1.83
APP-211ENST00000462267 LMTK3Q96Q04 1460 aa26.49■■□□□ 1.83
APP-211ENST00000462267 ARID4BQ4LE39 1312 aaPredicted RBP26.46■■□□□ 1.83
APP-211ENST00000462267 ABCA9Q8IUA7 1624 aa26.46■■□□□ 1.83
APP-211ENST00000462267 ATP10BO94823 1461 aa26.45■■□□□ 1.82
APP-211ENST00000462267 NEO1Q92859 1461 aa26.45■■□□□ 1.82
APP-211ENST00000462267 BCORL1Q5H9F3 1711 aa26.45■■□□□ 1.82
APP-211ENST00000462267 ARID3CA6NKF2 412 aa26.43■■□□□ 1.82
APP-211ENST00000462267 MADDQ8WXG6 1647 aa26.43■■□□□ 1.82
APP-211ENST00000462267 FRMPD1Q5SYB0 1578 aa26.34■■□□□ 1.81
APP-211ENST00000462267 HSPA2P54652 639 aa26.33■■□□□ 1.81
APP-211ENST00000462267 CERKQ8TCT0 537 aa26.32■■□□□ 1.8
APP-211ENST00000462267 PRXQ9BXM0 1461 aa26.31■■□□□ 1.8
APP-211ENST00000462267 P3H3Q8IVL6 736 aa26.3■■□□□ 1.8
APP-211ENST00000462267 RIMS1Q86UR5 1692 aaKnown RBP26.29■■□□□ 1.8
APP-211ENST00000462267 ARHGEF40Q8TER5 1519 aa26.28■■□□□ 1.8
APP-211ENST00000462267 DENND4BO75064 1496 aaPredicted RBP26.25■■□□□ 1.79
APP-211ENST00000462267 POGZQ7Z3K3 1410 aa26.25■■□□□ 1.79
APP-211ENST00000462267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.25■■□□□ 1.79
APP-211ENST00000462267 HNRNPUL2Q1KMD3 747 aaKnown RBP26.25■■□□□ 1.79
APP-211ENST00000462267 FHOD3Q2V2M9 1422 aa26.22■■□□□ 1.79
APP-211ENST00000462267 FANCAO15360 1455 aa26.2■■□□□ 1.78
APP-211ENST00000462267 PLPPR3Q6T4P5 718 aa26.2■■□□□ 1.78
APP-211ENST00000462267 RAPGEF6Q8TEU7 1601 aa26.2■■□□□ 1.78
APP-211ENST00000462267 AKNAQ7Z591 1439 aa26.2■■□□□ 1.78
APP-211ENST00000462267 RICTORQ6R327 1708 aa26.17■■□□□ 1.78
APP-211ENST00000462267 SOCS7O14512 581 aa26.16■■□□□ 1.78
APP-211ENST00000462267 DISP3Q9P2K9 1392 aa26.16■■□□□ 1.78
APP-211ENST00000462267 ILDR2Q71H61 639 aa26.14■■□□□ 1.78
APP-211ENST00000462267 SAMD9Q5K651 1589 aa26.14■■□□□ 1.78
APP-211ENST00000462267 NUP153P49790 1475 aaKnown RBP26.13■■□□□ 1.77
APP-211ENST00000462267 PLEKHD1A6NEE1 506 aa26.13■■□□□ 1.77
APP-211ENST00000462267 ZMYM4Q5VZL5 1548 aa26.13■■□□□ 1.77
APP-211ENST00000462267 CFAP74Q9C0B2 1584 aa26.11■■□□□ 1.77
APP-211ENST00000462267 MAGI2Q86UL8 1455 aa26.11■■□□□ 1.77
APP-211ENST00000462267 EFCAB5A4FU69 1503 aa26.1■■□□□ 1.77
APP-211ENST00000462267 ZFYVE16Q7Z3T8 1539 aa26.1■■□□□ 1.77
APP-211ENST00000462267 YEATS2Q9ULM3 1422 aa26.08■■□□□ 1.77
APP-211ENST00000462267 TTC37Q6PGP7 1564 aa26.07■■□□□ 1.76
APP-211ENST00000462267 MLECQ14165 292 aa26.06■■□□□ 1.76
APP-211ENST00000462267 DMRT2Q9Y5R5 561 aa26.05■■□□□ 1.76
APP-211ENST00000462267 SIGLEC1Q9BZZ2 1709 aa26.04■■□□□ 1.76
APP-211ENST00000462267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.03■■□□□ 1.76
APP-211ENST00000462267 FER1L4A9Z1Z3 1794 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms