RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 SHROOM4Q9ULL8 1493 aa18.85■□□□□ 0.61
SCNM1-204ENST00000461862 PLCD3Q8N3E9 789 aa18.84■□□□□ 0.61
SCNM1-204ENST00000461862 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
SCNM1-204ENST00000461862 PLEKHG5O94827 1062 aa18.82■□□□□ 0.6
SCNM1-204ENST00000461862 PHF12Q96QT6 1004 aa18.79■□□□□ 0.6
SCNM1-204ENST00000461862 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
SCNM1-204ENST00000461862 CLCN6P51797 869 aa18.76■□□□□ 0.59
SCNM1-204ENST00000461862 TSPYL2Q9H2G4 693 aaPredicted RBP18.72■□□□□ 0.59
SCNM1-204ENST00000461862 GALR2O43603 387 aaPredicted RBP18.7■□□□□ 0.58
SCNM1-204ENST00000461862 POTEIP0CG38 1075 aa18.7■□□□□ 0.58
SCNM1-204ENST00000461862 RASEFQ8IZ41 740 aa18.7■□□□□ 0.58
SCNM1-204ENST00000461862 CCDC61Q9Y6R9 512 aa18.65■□□□□ 0.58
SCNM1-204ENST00000461862 ZBTB47Q9UFB7 747 aaPredicted RBP18.64■□□□□ 0.57
SCNM1-204ENST00000461862 NUBP1P53384 320 aa18.63■□□□□ 0.57
SCNM1-204ENST00000461862 VASPP50552 380 aaPredicted RBP18.62■□□□□ 0.57
SCNM1-204ENST00000461862 MS4A3Q96HJ5 214 aa18.54■□□□□ 0.56
SCNM1-204ENST00000461862 DCBLD2Q96PD2 775 aa18.53■□□□□ 0.56
SCNM1-204ENST00000461862 KIF12Q96FN5 646 aa18.5■□□□□ 0.55
SCNM1-204ENST00000461862 MAP3K13O43283 966 aa18.41■□□□□ 0.54
SCNM1-204ENST00000461862 FAM212AQ96EL1 285 aa18.41■□□□□ 0.54
SCNM1-204ENST00000461862 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
SCNM1-204ENST00000461862 KLHL34Q8N239 644 aa18.37■□□□□ 0.53
SCNM1-204ENST00000461862 IFNLR1Q8IU57 520 aaPredicted RBP18.35■□□□□ 0.53
SCNM1-204ENST00000461862 CECR2Q9BXF3 1484 aa18.34■□□□□ 0.53
SCNM1-204ENST00000461862 TRPC6Q9Y210 931 aa18.34■□□□□ 0.53
SCNM1-204ENST00000461862 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
SCNM1-204ENST00000461862 ASTLQ6HA08 431 aaPredicted RBP18.31■□□□□ 0.52
SCNM1-204ENST00000461862 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
SCNM1-204ENST00000461862 LHX8Q68G74 356 aa18.3■□□□□ 0.52
SCNM1-204ENST00000461862 ATMINO43313 823 aaPredicted RBP18.29■□□□□ 0.52
SCNM1-204ENST00000461862 DCAF8Q5TAQ9 597 aa18.28■□□□□ 0.52
SCNM1-204ENST00000461862 PCDHB13Q9Y5F0 798 aa18.24■□□□□ 0.51
SCNM1-204ENST00000461862 SGIP1Q9BQI5 828 aa18.23■□□□□ 0.51
SCNM1-204ENST00000461862 BMP2KQ9NSY1 1161 aaPredicted RBP18.23■□□□□ 0.51
SCNM1-204ENST00000461862 PYGBP11216 843 aa18.2■□□□□ 0.5
SCNM1-204ENST00000461862 ATN1P54259 1190 aaPredicted RBP18.19■□□□□ 0.5
SCNM1-204ENST00000461862 IFNL1Q8IU54 200 aa18.19■□□□□ 0.5
SCNM1-204ENST00000461862 TIE1P35590 1138 aa18.17■□□□□ 0.5
SCNM1-204ENST00000461862 SPOCK2Q92563 424 aa18.17■□□□□ 0.5
SCNM1-204ENST00000461862 GSE1Q14687 1217 aa18.14■□□□□ 0.49
SCNM1-204ENST00000461862 SUPT5HO00267 1087 aaKnown RBP18.13■□□□□ 0.49
SCNM1-204ENST00000461862 TTLL13PA6NNM8 815 aa18.12■□□□□ 0.49
SCNM1-204ENST00000461862 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
SCNM1-204ENST00000461862 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
SCNM1-204ENST00000461862 POTEB2H3BUK9 544 aa18.1■□□□□ 0.49
SCNM1-204ENST00000461862 METRNQ9UJH8 293 aa18.1■□□□□ 0.49
SCNM1-204ENST00000461862 SLC39A7Q92504 469 aa18.09■□□□□ 0.49
SCNM1-204ENST00000461862 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.48
SCNM1-204ENST00000461862 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
SCNM1-204ENST00000461862 C7P10643 843 aa18.05■□□□□ 0.48
SCNM1-204ENST00000461862 PCDHB8Q9UN66 801 aa18.03■□□□□ 0.48
SCNM1-204ENST00000461862 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
SCNM1-204ENST00000461862 CHRM1P11229 460 aaPredicted RBP17.99■□□□□ 0.47
SCNM1-204ENST00000461862 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
SCNM1-204ENST00000461862 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
SCNM1-204ENST00000461862 TMEM106CQ9BVX2 250 aa17.98■□□□□ 0.47
SCNM1-204ENST00000461862 POTEFA5A3E0 1075 aa17.97■□□□□ 0.47
SCNM1-204ENST00000461862 POTEJP0CG39 1038 aa17.92■□□□□ 0.46
SCNM1-204ENST00000461862 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
SCNM1-204ENST00000461862 OTUD5Q96G74 571 aa17.91■□□□□ 0.46
SCNM1-204ENST00000461862 WIZO95785 1651 aa17.9■□□□□ 0.46
SCNM1-204ENST00000461862 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
SCNM1-204ENST00000461862 COLQQ9Y215 455 aaPredicted RBP17.88■□□□□ 0.45
SCNM1-204ENST00000461862 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
SCNM1-204ENST00000461862 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
SCNM1-204ENST00000461862 IER5LQ5T953 404 aa17.85■□□□□ 0.45
SCNM1-204ENST00000461862 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
SCNM1-204ENST00000461862 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
SCNM1-204ENST00000461862 SEC24BO95487 1268 aa17.78■□□□□ 0.44
SCNM1-204ENST00000461862 PSEN1P49768 467 aa17.76■□□□□ 0.43
SCNM1-204ENST00000461862 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
SCNM1-204ENST00000461862 IRX5P78411 483 aaPredicted RBP17.74■□□□□ 0.43
SCNM1-204ENST00000461862 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
SCNM1-204ENST00000461862 PDAP1Q13442 181 aaKnown RBP17.71■□□□□ 0.43
SCNM1-204ENST00000461862 PLCG2P16885 1265 aa17.66■□□□□ 0.42
SCNM1-204ENST00000461862 RNF25Q96BH1 459 aaPredicted RBP17.66■□□□□ 0.42
SCNM1-204ENST00000461862 NESP48681 1621 aa17.65■□□□□ 0.42
SCNM1-204ENST00000461862 MAMSTRQ6ZN01 415 aa17.65■□□□□ 0.42
SCNM1-204ENST00000461862 SCUBE2Q9NQ36 999 aa17.62■□□□□ 0.41
SCNM1-204ENST00000461862 OCEL1Q9H607 264 aa17.61■□□□□ 0.41
SCNM1-204ENST00000461862 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
SCNM1-204ENST00000461862 MKRN3Q13064 507 aaKnown RBP17.56■□□□□ 0.4
SCNM1-204ENST00000461862 PDCD7Q8N8D1 485 aaKnown RBP17.56■□□□□ 0.4
SCNM1-204ENST00000461862 CABP2Q9NPB3 220 aa17.55■□□□□ 0.4
SCNM1-204ENST00000461862 RIOK3O14730 519 aaKnown RBP17.54■□□□□ 0.4
SCNM1-204ENST00000461862 PKD2Q13563 968 aa17.49■□□□□ 0.39
SCNM1-204ENST00000461862 ILDR1Q86SU0 546 aaPredicted RBP17.49■□□□□ 0.39
SCNM1-204ENST00000461862 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
SCNM1-204ENST00000461862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCNM1-204ENST00000461862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
SCNM1-204ENST00000461862 ZFP91Q96JP5 570 aaPredicted RBP17.45■□□□□ 0.38
SCNM1-204ENST00000461862 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
SCNM1-204ENST00000461862 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
SCNM1-204ENST00000461862 ECM2O94769 699 aaPredicted RBP17.42■□□□□ 0.38
SCNM1-204ENST00000461862 EFCAB3Q8N7B9 438 aa17.4■□□□□ 0.38
SCNM1-204ENST00000461862 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
SCNM1-204ENST00000461862 DPY19L2Q6NUT2 758 aa17.38■□□□□ 0.37
SCNM1-204ENST00000461862 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
SCNM1-204ENST00000461862 SLAIN1Q8ND83 568 aa17.36■□□□□ 0.37
SCNM1-204ENST00000461862 LCE2DQ5TA82 110 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms