RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 APLP2Q06481 763 aa39.38■■■■□ 3.89
CDH23-208ENST00000461841 FHAD1B1AJZ9 1412 aa39.36■■■■□ 3.89
CDH23-208ENST00000461841 ADAMTS12P58397 1594 aa39.31■■■■□ 3.88
CDH23-208ENST00000461841 HRCP23327 699 aa39.28■■■■□ 3.88
CDH23-208ENST00000461841 EIF4G3O43432 1585 aaKnown RBP39.28■■■■□ 3.88
CDH23-208ENST00000461841 EFCAB5A4FU69 1503 aa39.21■■■■□ 3.87
CDH23-208ENST00000461841 P3H3Q8IVL6 736 aa39.17■■■■□ 3.86
CDH23-208ENST00000461841 SNAPC4Q5SXM2 1469 aa39.14■■■■□ 3.86
CDH23-208ENST00000461841 FHOD3Q2V2M9 1422 aa39.1■■■■□ 3.85
CDH23-208ENST00000461841 KANK4Q5T7N3 995 aaPredicted RBP39.06■■■■□ 3.84
CDH23-208ENST00000461841 SAMD9Q5K651 1589 aa39.04■■■■□ 3.84
CDH23-208ENST00000461841 MAGI1Q96QZ7 1491 aaPredicted RBP39.03■■■■□ 3.84
CDH23-208ENST00000461841 IQGAP2Q13576 1575 aa38.97■■■■□ 3.83
CDH23-208ENST00000461841 GRIN2AQ12879 1464 aa38.96■■■■□ 3.83
CDH23-208ENST00000461841 MAP3K1Q13233 1512 aa38.95■■■■□ 3.83
CDH23-208ENST00000461841 PCF11O94913 1555 aaKnown RBP38.94■■■■□ 3.82
CDH23-208ENST00000461841 FMN1Q68DA7 1419 aa38.91■■■■□ 3.82
CDH23-208ENST00000461841 SYNJ2O15056 1496 aa38.9■■■■□ 3.82
CDH23-208ENST00000461841 TIAM1Q13009 1591 aa38.9■■■■□ 3.82
CDH23-208ENST00000461841 CASKIN1Q8WXD9 1431 aa38.88■■■■□ 3.82
CDH23-208ENST00000461841 FYCO1Q9BQS8 1478 aa38.87■■■■□ 3.81
CDH23-208ENST00000461841 CHMP7Q8WUX9 453 aaPredicted RBP38.86■■■■□ 3.81
CDH23-208ENST00000461841 KIAA0586Q9BVV6 1533 aa38.85■■■■□ 3.81
CDH23-208ENST00000461841 UGGT2Q9NYU1 1516 aa38.79■■■■□ 3.8
CDH23-208ENST00000461841 ATP1B4Q9UN42 357 aaPredicted RBP38.79■■■■□ 3.8
CDH23-208ENST00000461841 FBLN2P98095 1184 aa38.75■■■■□ 3.79
CDH23-208ENST00000461841 LRRC9Q6ZRR7 1453 aa38.75■■■■□ 3.79
CDH23-208ENST00000461841 CFAP43Q8NDM7 1665 aa38.74■■■■□ 3.79
CDH23-208ENST00000461841 CEP170Q5SW79 1584 aa38.71■■■■□ 3.79
CDH23-208ENST00000461841 NUP160Q12769 1436 aa38.65■■■■□ 3.78
CDH23-208ENST00000461841 RRBP1Q9P2E9 1410 aaKnown RBP38.62■■■■□ 3.77
CDH23-208ENST00000461841 DISP1Q96F81 1524 aa38.61■■■■□ 3.77
CDH23-208ENST00000461841 HNRNPUL2Q1KMD3 747 aaKnown RBP38.61■■■■□ 3.77
CDH23-208ENST00000461841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.59■■■■□ 3.77
CDH23-208ENST00000461841 ZEB1P37275 1124 aaPredicted RBP38.57■■■■□ 3.77
CDH23-208ENST00000461841 KIAA0556O60303 1618 aa38.56■■■■□ 3.76
CDH23-208ENST00000461841 LRRIQ1Q96JM4 1722 aa38.54■■■■□ 3.76
CDH23-208ENST00000461841 CCNB3Q8WWL7 1395 aa38.49■■■■□ 3.75
CDH23-208ENST00000461841 PHLDB1Q86UU1 1377 aa38.45■■■■□ 3.75
CDH23-208ENST00000461841 CCER1Q8TC90 406 aaPredicted RBP38.45■■■■□ 3.75
CDH23-208ENST00000461841 JPH4Q96JJ6 628 aa38.45■■■■□ 3.75
CDH23-208ENST00000461841 HECW1Q76N89 1606 aa38.42■■■■□ 3.74
CDH23-208ENST00000461841 CCDC18Q5T9S5 1454 aa38.39■■■■□ 3.74
CDH23-208ENST00000461841 MTUS2Q5JR59 1369 aa38.38■■■■□ 3.73
CDH23-208ENST00000461841 CHD1O14646 1710 aa38.36■■■■□ 3.73
CDH23-208ENST00000461841 EPRSP07814 1512 aaKnown RBP38.34■■■■□ 3.73
CDH23-208ENST00000461841 CARMIL2Q6F5E8 1435 aa38.34■■■■□ 3.73
CDH23-208ENST00000461841 EHBP1L1Q8N3D4 1523 aa38.25■■■■□ 3.71
CDH23-208ENST00000461841 MAGI3Q5TCQ9 1506 aa38.25■■■■□ 3.71
CDH23-208ENST00000461841 CDK13Q14004 1512 aaKnown RBP38.23■■■■□ 3.71
CDH23-208ENST00000461841 RAPGEF6Q8TEU7 1601 aa38.23■■■■□ 3.71
CDH23-208ENST00000461841 NUP153P49790 1475 aaKnown RBP38.2■■■■□ 3.71
CDH23-208ENST00000461841 NCOA2Q15596 1464 aa38.19■■■■□ 3.7
CDH23-208ENST00000461841 SUPT6HQ7KZ85 1726 aaKnown RBP38.18■■■■□ 3.7
CDH23-208ENST00000461841 ARID3CA6NKF2 412 aa38.17■■■■□ 3.7
CDH23-208ENST00000461841 ITGAEP38570 1179 aa38.15■■■■□ 3.7
CDH23-208ENST00000461841 FAM50AQ14320 339 aaKnown RBP38.14■■■■□ 3.7
CDH23-208ENST00000461841 PLB1Q6P1J6 1458 aa38.14■■■■□ 3.7
CDH23-208ENST00000461841 PRG4Q92954 1404 aaPredicted RBP38.13■■■■□ 3.7
CDH23-208ENST00000461841 FGD6Q6ZV73 1430 aa38.12■■■■□ 3.69
CDH23-208ENST00000461841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.11■■■■□ 3.69
CDH23-208ENST00000461841 ARHGEF11O15085 1522 aa38.11■■■■□ 3.69
CDH23-208ENST00000461841 MYOM3Q5VTT5 1437 aa38.07■■■■□ 3.68
CDH23-208ENST00000461841 SHROOM2Q13796 1616 aa38.04■■■■□ 3.68
CDH23-208ENST00000461841 ABCA8O94911 1581 aa37.98■■■■□ 3.67
CDH23-208ENST00000461841 CDK11AQ9UQ88 783 aaPredicted RBP37.97■■■■□ 3.67
CDH23-208ENST00000461841 PTPRGP23470 1445 aa37.95■■■■□ 3.67
CDH23-208ENST00000461841 CLASP1Q7Z460 1538 aa37.91■■■■□ 3.66
CDH23-208ENST00000461841 PTPN23Q9H3S7 1636 aa37.85■■■■□ 3.65
CDH23-208ENST00000461841 DHX57Q6P158 1386 aaKnown RBP37.84■■■■□ 3.65
CDH23-208ENST00000461841 TROQ12816 1431 aaPredicted RBP37.84■■■■□ 3.65
CDH23-208ENST00000461841 SETD5Q9C0A6 1442 aa37.83■■■■□ 3.65
CDH23-208ENST00000461841 RAB3GAP2Q9H2M9 1393 aa37.83■■■■□ 3.65
CDH23-208ENST00000461841 ERCC6L2Q5T890 1561 aa37.82■■■■□ 3.65
CDH23-208ENST00000461841 ATP10BO94823 1461 aa37.81■■■■□ 3.64
CDH23-208ENST00000461841 MIA2Q96PC5 1412 aa37.81■■■■□ 3.64
CDH23-208ENST00000461841 TCOF1Q13428 1488 aaKnown RBP37.79■■■■□ 3.64
CDH23-208ENST00000461841 PTPRKQ15262 1439 aa37.76■■■■□ 3.63
CDH23-208ENST00000461841 CLSPNQ9HAW4 1339 aa37.73■■■■□ 3.63
CDH23-208ENST00000461841 UACAQ9BZF9 1416 aa37.72■■■■□ 3.63
CDH23-208ENST00000461841 PLEKHD1A6NEE1 506 aa37.7■■■■□ 3.63
CDH23-208ENST00000461841 ADCY10Q96PN6 1610 aa37.69■■■■□ 3.62
CDH23-208ENST00000461841 KIF14Q15058 1648 aa37.65■■■■□ 3.62
CDH23-208ENST00000461841 HFM1A2PYH4 1435 aa37.6■■■■□ 3.61
CDH23-208ENST00000461841 GPATCH8Q9UKJ3 1502 aaKnown RBP37.57■■■■□ 3.6
CDH23-208ENST00000461841 ABCC2Q92887 1545 aa37.56■■■■□ 3.6
CDH23-208ENST00000461841 ZNF644Q9H582 1327 aaPredicted RBP37.53■■■■□ 3.6
CDH23-208ENST00000461841 ITSN2Q9NZM3 1697 aa37.52■■■■□ 3.6
CDH23-208ENST00000461841 NAIPQ13075 1403 aa37.51■■■■□ 3.6
CDH23-208ENST00000461841 CFDP1Q9UEE9 299 aaPredicted RBP37.51■■■■□ 3.6
CDH23-208ENST00000461841 ABCC10Q5T3U5 1492 aa37.5■■■■□ 3.59
CDH23-208ENST00000461841 CHIC2Q9UKJ5 165 aa37.46■■■■□ 3.59
CDH23-208ENST00000461841 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
CDH23-208ENST00000461841 UHRF1BP1LA0JNW5 1464 aa37.44■■■■□ 3.58
CDH23-208ENST00000461841 MAPKBP1O60336 1514 aa37.43■■■■□ 3.58
CDH23-208ENST00000461841 DAPK1P53355 1430 aa37.43■■■■□ 3.58
CDH23-208ENST00000461841 DNMT1P26358 1616 aaKnown RBP37.42■■■■□ 3.58
CDH23-208ENST00000461841 CAMSAP2Q08AD1 1489 aa37.41■■■■□ 3.58
CDH23-208ENST00000461841 ABCC5O15440 1437 aa37.41■■■■□ 3.58
CDH23-208ENST00000461841 AKNAQ7Z591 1439 aa37.41■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms