RNA–Protein interactions for RNA: ENST00000460503.5

NMD3-203, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 4

Gene NMD3, Length 547 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-203ENST00000460503 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
NMD3-203ENST00000460503 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
NMD3-203ENST00000460503 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
NMD3-203ENST00000460503 DCAF8Q5TAQ9 597 aa14.62□□□□□ -0.07
NMD3-203ENST00000460503 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
NMD3-203ENST00000460503 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
NMD3-203ENST00000460503 GSE1Q14687 1217 aa14.57□□□□□ -0.08
NMD3-203ENST00000460503 CCDC61Q9Y6R9 512 aa14.57□□□□□ -0.08
NMD3-203ENST00000460503 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
NMD3-203ENST00000460503 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
NMD3-203ENST00000460503 CIZ1Q9ULV3 898 aaPredicted RBP14.54□□□□□ -0.08
NMD3-203ENST00000460503 PHF12Q96QT6 1004 aa14.52□□□□□ -0.09
NMD3-203ENST00000460503 PYGBP11216 843 aa14.44□□□□□ -0.1
NMD3-203ENST00000460503 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
NMD3-203ENST00000460503 GABBR2O75899 941 aa14.43□□□□□ -0.1
NMD3-203ENST00000460503 CLCN6P51797 869 aa14.43□□□□□ -0.1
NMD3-203ENST00000460503 CUX2O14529 1486 aa14.42□□□□□ -0.1
NMD3-203ENST00000460503 MAP3K13O43283 966 aa14.39□□□□□ -0.11
NMD3-203ENST00000460503 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
NMD3-203ENST00000460503 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
NMD3-203ENST00000460503 PKD2Q13563 968 aa14.37□□□□□ -0.11
NMD3-203ENST00000460503 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
NMD3-203ENST00000460503 MS4A3Q96HJ5 214 aa14.35□□□□□ -0.11
NMD3-203ENST00000460503 SGIP1Q9BQI5 828 aa14.34□□□□□ -0.11
NMD3-203ENST00000460503 PCDHB13Q9Y5F0 798 aa14.34□□□□□ -0.11
NMD3-203ENST00000460503 ECM2O94769 699 aaPredicted RBP14.29□□□□□ -0.12
NMD3-203ENST00000460503 IFNL1Q8IU54 200 aa14.28□□□□□ -0.12
NMD3-203ENST00000460503 AMER1Q5JTC6 1135 aaPredicted RBP14.25□□□□□ -0.13
NMD3-203ENST00000460503 PCDHB8Q9UN66 801 aa14.25□□□□□ -0.13
NMD3-203ENST00000460503 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
NMD3-203ENST00000460503 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
NMD3-203ENST00000460503 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
NMD3-203ENST00000460503 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
NMD3-203ENST00000460503 TRPC6Q9Y210 931 aa14.21□□□□□ -0.13
NMD3-203ENST00000460503 RNF25Q96BH1 459 aaPredicted RBP14.2□□□□□ -0.14
NMD3-203ENST00000460503 DCBLD2Q96PD2 775 aa14.18□□□□□ -0.14
NMD3-203ENST00000460503 RGL2O15211 777 aa14.17□□□□□ -0.14
NMD3-203ENST00000460503 NACADO15069 1562 aa14.17□□□□□ -0.14
NMD3-203ENST00000460503 RIOK3O14730 519 aaKnown RBP14.16□□□□□ -0.14
NMD3-203ENST00000460503 TIE1P35590 1138 aa14.14□□□□□ -0.15
NMD3-203ENST00000460503 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
NMD3-203ENST00000460503 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
NMD3-203ENST00000460503 PSEN1P49768 467 aa14.1□□□□□ -0.15
NMD3-203ENST00000460503 PDAP1Q13442 181 aaKnown RBP14.1□□□□□ -0.15
NMD3-203ENST00000460503 ASTLQ6HA08 431 aaPredicted RBP14.1□□□□□ -0.15
NMD3-203ENST00000460503 ATMINO43313 823 aaPredicted RBP14.09□□□□□ -0.15
NMD3-203ENST00000460503 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
NMD3-203ENST00000460503 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
NMD3-203ENST00000460503 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
NMD3-203ENST00000460503 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
NMD3-203ENST00000460503 TAOK2Q9UL54 1235 aa14.05□□□□□ -0.16
NMD3-203ENST00000460503 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.02□□□□□ -0.17
NMD3-203ENST00000460503 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
NMD3-203ENST00000460503 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.17
NMD3-203ENST00000460503 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
NMD3-203ENST00000460503 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
NMD3-203ENST00000460503 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
NMD3-203ENST00000460503 ILDR1Q86SU0 546 aaPredicted RBP13.96□□□□□ -0.17
NMD3-203ENST00000460503 STK25O00506 426 aa13.93□□□□□ -0.18
NMD3-203ENST00000460503 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
NMD3-203ENST00000460503 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
NMD3-203ENST00000460503 CABP2Q9NPB3 220 aa13.92□□□□□ -0.18
NMD3-203ENST00000460503 SLC39A7Q92504 469 aa13.91□□□□□ -0.18
NMD3-203ENST00000460503 ERCC6Q03468 1493 aa13.91□□□□□ -0.18
NMD3-203ENST00000460503 GOLGA2Q08379 1002 aa13.9□□□□□ -0.18
NMD3-203ENST00000460503 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
NMD3-203ENST00000460503 C7P10643 843 aa13.88□□□□□ -0.19
NMD3-203ENST00000460503 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
NMD3-203ENST00000460503 IER5LQ5T953 404 aa13.87□□□□□ -0.19
NMD3-203ENST00000460503 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
NMD3-203ENST00000460503 MKRN3Q13064 507 aaKnown RBP13.86□□□□□ -0.19
NMD3-203ENST00000460503 HS6ST3Q8IZP7 471 aa13.86□□□□□ -0.19
NMD3-203ENST00000460503 EFCAB3Q8N7B9 438 aa13.84□□□□□ -0.19
NMD3-203ENST00000460503 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
NMD3-203ENST00000460503 POTEFA5A3E0 1075 aa13.79□□□□□ -0.2
NMD3-203ENST00000460503 SEC24BO95487 1268 aa13.79□□□□□ -0.2
NMD3-203ENST00000460503 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
NMD3-203ENST00000460503 SOX12O15370 315 aa13.76□□□□□ -0.21
NMD3-203ENST00000460503 OCEL1Q9H607 264 aa13.76□□□□□ -0.21
NMD3-203ENST00000460503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.216e-7■□□□□ 10.2
NMD3-203ENST00000460503 PLCG2P16885 1265 aa13.74□□□□□ -0.21
NMD3-203ENST00000460503 PDCD7Q8N8D1 485 aaKnown RBP13.71□□□□□ -0.21
NMD3-203ENST00000460503 PHF8Q9UPP1 1060 aa13.71□□□□□ -0.21
NMD3-203ENST00000460503 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
NMD3-203ENST00000460503 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
NMD3-203ENST00000460503 NLRP6P59044 892 aa13.67□□□□□ -0.22
NMD3-203ENST00000460503 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
NMD3-203ENST00000460503 FBXO22Q8NEZ5 403 aa13.66□□□□□ -0.22
NMD3-203ENST00000460503 LHX8Q68G74 356 aa13.65□□□□□ -0.22
NMD3-203ENST00000460503 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
NMD3-203ENST00000460503 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
NMD3-203ENST00000460503 BBXQ8WY36 941 aaPredicted RBP13.62□□□□□ -0.23
NMD3-203ENST00000460503 POTEJP0CG39 1038 aa13.61□□□□□ -0.23
NMD3-203ENST00000460503 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
NMD3-203ENST00000460503 RYDENQ9NUL5 291 aaKnown RBP13.54□□□□□ -0.24
NMD3-203ENST00000460503 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
NMD3-203ENST00000460503 GTPBP6O43824 516 aaPredicted RBP13.53□□□□□ -0.24
NMD3-203ENST00000460503 BOLA1Q9Y3E2 137 aa13.53□□□□□ -0.24
NMD3-203ENST00000460503 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
NMD3-203ENST00000460503 MAMSTRQ6ZN01 415 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms