RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 KIF13AQ9H1H9 1805 aa21.5■■□□□ 1.03
C4A-244ENST00000460060 NPM1P06748 294 aaKnown RBP eCLIP21.4■■□□□ 1.02
C4A-244ENST00000460060 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
C4A-244ENST00000460060 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.02
C4A-244ENST00000460060 ABCC10Q5T3U5 1492 aa21.38■■□□□ 1.01
C4A-244ENST00000460060 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
C4A-244ENST00000460060 IGF1RP08069 1367 aa21.33■■□□□ 1
C4A-244ENST00000460060 KIAA0586Q9BVV6 1533 aa21.32■■□□□ 1
C4A-244ENST00000460060 ADCY10Q96PN6 1610 aa21.31■■□□□ 1
C4A-244ENST00000460060 DIP2BQ9P265 1576 aa21.28■■□□□ 1
C4A-244ENST00000460060 KIF27Q86VH2 1401 aa21.25■□□□□ 0.99
C4A-244ENST00000460060 CUL7Q14999 1698 aa21.22■□□□□ 0.99
C4A-244ENST00000460060 PTPRGP23470 1445 aa21.19■□□□□ 0.98
C4A-244ENST00000460060 TSPOAP1O95153 1857 aa21.18■□□□□ 0.98
C4A-244ENST00000460060 KDM6BO15054 1643 aa21.18■□□□□ 0.98
C4A-244ENST00000460060 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
C4A-244ENST00000460060 KDM4FA0A1W2PPD8 638 aa21.15■□□□□ 0.98
C4A-244ENST00000460060 TNIKQ9UKE5 1360 aa21.11■□□□□ 0.97
C4A-244ENST00000460060 TTBK1Q5TCY1 1321 aaPredicted RBP21.11■□□□□ 0.97
C4A-244ENST00000460060 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
C4A-244ENST00000460060 ABCC2Q92887 1545 aa21.09■□□□□ 0.97
C4A-244ENST00000460060 ASXL2Q76L83 1435 aa21.04■□□□□ 0.96
C4A-244ENST00000460060 PLB1Q6P1J6 1458 aa21.04■□□□□ 0.96
C4A-244ENST00000460060 IQGAP2Q13576 1575 aa21.03■□□□□ 0.96
C4A-244ENST00000460060 UHRF1BP1LA0JNW5 1464 aa21.03■□□□□ 0.96
C4A-244ENST00000460060 GLI2P10070 1586 aa21.02■□□□□ 0.96
C4A-244ENST00000460060 UACAQ9BZF9 1416 aa21.01■□□□□ 0.95
C4A-244ENST00000460060 PPRC1Q5VV67 1664 aaKnown RBP20.99■□□□□ 0.95
C4A-244ENST00000460060 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
C4A-244ENST00000460060 DISP1Q96F81 1524 aa20.99■□□□□ 0.95
C4A-244ENST00000460060 EEA1Q15075 1411 aa20.97■□□□□ 0.95
C4A-244ENST00000460060 KDM5BQ9UGL1 1544 aa20.94■□□□□ 0.94
C4A-244ENST00000460060 RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
C4A-244ENST00000460060 EPRSP07814 1512 aaKnown RBP20.92■□□□□ 0.94
C4A-244ENST00000460060 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
C4A-244ENST00000460060 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
C4A-244ENST00000460060 COL17A1Q9UMD9 1497 aaPredicted RBP20.91■□□□□ 0.94
C4A-244ENST00000460060 MAP3K4Q9Y6R4 1608 aa20.87■□□□□ 0.93
C4A-244ENST00000460060 ADGRL1O94910 1474 aa20.86■□□□□ 0.93
C4A-244ENST00000460060 ZCCHC11Q5TAX3 1644 aaKnown RBP20.86■□□□□ 0.93
C4A-244ENST00000460060 KIAA0556O60303 1618 aa20.85■□□□□ 0.93
C4A-244ENST00000460060 TEX14Q8IWB6 1497 aa20.84■□□□□ 0.93
C4A-244ENST00000460060 ILDR1Q86SU0 546 aaPredicted RBP20.78■□□□□ 0.92
C4A-244ENST00000460060 WDR7Q9Y4E6 1490 aa20.77■□□□□ 0.92
C4A-244ENST00000460060 CTTNBP2Q8WZ74 1663 aa20.72■□□□□ 0.91
C4A-244ENST00000460060 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
C4A-244ENST00000460060 GOLGA3Q08378 1498 aa20.71■□□□□ 0.91
C4A-244ENST00000460060 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
C4A-244ENST00000460060 KCNH8Q96L42 1107 aa20.71■□□□□ 0.91
C4A-244ENST00000460060 MAGI3Q5TCQ9 1506 aa20.7■□□□□ 0.9
C4A-244ENST00000460060 LOC105371045A0A1W2PR82 267 aa20.7■□□□□ 0.9
C4A-244ENST00000460060 ABCA8O94911 1581 aa20.7■□□□□ 0.9
C4A-244ENST00000460060 CFAP43Q8NDM7 1665 aa20.68■□□□□ 0.9
C4A-244ENST00000460060 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
C4A-244ENST00000460060 HECW2Q9P2P5 1572 aa20.65■□□□□ 0.9
C4A-244ENST00000460060 KIF21BO75037 1637 aa20.64■□□□□ 0.9
C4A-244ENST00000460060 UBTFP17480 764 aaKnown RBP20.58■□□□□ 0.89
C4A-244ENST00000460060 ATP10BO94823 1461 aa20.56■□□□□ 0.88
C4A-244ENST00000460060 ARAP3Q8WWN8 1544 aa20.55■□□□□ 0.88
C4A-244ENST00000460060 P3H3Q8IVL6 736 aa20.55■□□□□ 0.88
C4A-244ENST00000460060 ARID3CA6NKF2 412 aa20.54■□□□□ 0.88
C4A-244ENST00000460060 PHLDB1Q86UU1 1377 aa20.49■□□□□ 0.87
C4A-244ENST00000460060 ABCA9Q8IUA7 1624 aa20.47■□□□□ 0.87
C4A-244ENST00000460060 RAPGEF3O95398 923 aa20.44■□□□□ 0.86
C4A-244ENST00000460060 SAMD9Q5K651 1589 aa20.42■□□□□ 0.86
C4A-244ENST00000460060 NEO1Q92859 1461 aa20.41■□□□□ 0.86
C4A-244ENST00000460060 RAPGEF6Q8TEU7 1601 aa20.41■□□□□ 0.86
C4A-244ENST00000460060 ADAMTSL3P82987 1691 aa20.41■□□□□ 0.86
C4A-244ENST00000460060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.4■□□□□ 0.86
C4A-244ENST00000460060 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
C4A-244ENST00000460060 PTPRMP28827 1452 aa20.39■□□□□ 0.85
C4A-244ENST00000460060 NUP153P49790 1475 aaKnown RBP20.34■□□□□ 0.85
C4A-244ENST00000460060 CEP162Q5TB80 1403 aa20.34■□□□□ 0.85
C4A-244ENST00000460060 FBXO41Q8TF61 875 aa20.33■□□□□ 0.85
C4A-244ENST00000460060 FRMPD1Q5SYB0 1578 aa20.33■□□□□ 0.84
C4A-244ENST00000460060 BCORL1Q5H9F3 1711 aa20.33■□□□□ 0.84
C4A-244ENST00000460060 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
C4A-244ENST00000460060 ARID4BQ4LE39 1312 aaPredicted RBP20.31■□□□□ 0.84
C4A-244ENST00000460060 PLEKHD1A6NEE1 506 aa20.31■□□□□ 0.84
C4A-244ENST00000460060 CLIP1P30622 1438 aa20.29■□□□□ 0.84
C4A-244ENST00000460060 FHOD3Q2V2M9 1422 aa20.28■□□□□ 0.84
C4A-244ENST00000460060 MADDQ8WXG6 1647 aa20.27■□□□□ 0.84
C4A-244ENST00000460060 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
C4A-244ENST00000460060 AKNAQ7Z591 1439 aa20.26■□□□□ 0.83
C4A-244ENST00000460060 RICTORQ6R327 1708 aa20.24■□□□□ 0.83
C4A-244ENST00000460060 PCF11O94913 1555 aaKnown RBP20.23■□□□□ 0.83
C4A-244ENST00000460060 ARHGEF40Q8TER5 1519 aa20.22■□□□□ 0.83
C4A-244ENST00000460060 FANCAO15360 1455 aa20.22■□□□□ 0.83
C4A-244ENST00000460060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.22■□□□□ 0.83
C4A-244ENST00000460060 LMTK3Q96Q04 1460 aa20.21■□□□□ 0.83
C4A-244ENST00000460060 RIMS1Q86UR5 1692 aaKnown RBP20.19■□□□□ 0.82
C4A-244ENST00000460060 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
C4A-244ENST00000460060 CFAP74Q9C0B2 1584 aa20.18■□□□□ 0.82
C4A-244ENST00000460060 EFCAB5A4FU69 1503 aa20.17■□□□□ 0.82
C4A-244ENST00000460060 POGZQ7Z3K3 1410 aa20.16■□□□□ 0.82
C4A-244ENST00000460060 ZMYM4Q5VZL5 1548 aa20.16■□□□□ 0.82
C4A-244ENST00000460060 TTC37Q6PGP7 1564 aa20.16■□□□□ 0.82
C4A-244ENST00000460060 YEATS2Q9ULM3 1422 aa20.14■□□□□ 0.81
C4A-244ENST00000460060 MAGI2Q86UL8 1455 aa20.13■□□□□ 0.81
C4A-244ENST00000460060 HSPA2P54652 639 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms