RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
HPS4-207ENST00000459918 FHAD1B1AJZ9 1412 aa14.21□□□□□ -0.13
HPS4-207ENST00000459918 ERICH3Q5RHP9 1530 aa14.18□□□□□ -0.14
HPS4-207ENST00000459918 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
HPS4-207ENST00000459918 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
HPS4-207ENST00000459918 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
HPS4-207ENST00000459918 MSH5O43196 834 aa14.12□□□□□ -0.15
HPS4-207ENST00000459918 FAM69CQ0P6D2 419 aa14.09□□□□□ -0.15
HPS4-207ENST00000459918 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
HPS4-207ENST00000459918 TSPOAP1O95153 1857 aa14.09□□□□□ -0.15
HPS4-207ENST00000459918 PIAS4Q8N2W9 510 aaPredicted RBP14.08□□□□□ -0.16
HPS4-207ENST00000459918 JPH4Q96JJ6 628 aa14.08□□□□□ -0.16
HPS4-207ENST00000459918 KDM6BO15054 1643 aa14.08□□□□□ -0.16
HPS4-207ENST00000459918 DIP2BQ9P265 1576 aa14.07□□□□□ -0.16
HPS4-207ENST00000459918 ABCC10Q5T3U5 1492 aa14.06□□□□□ -0.16
HPS4-207ENST00000459918 MAPKBP1O60336 1514 aa14.05□□□□□ -0.16
HPS4-207ENST00000459918 ADCY10Q96PN6 1610 aa14.05□□□□□ -0.16
HPS4-207ENST00000459918 ADRA2BP18089 450 aa14.03□□□□□ -0.16
HPS4-207ENST00000459918 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
HPS4-207ENST00000459918 CUL7Q14999 1698 aa14□□□□□ -0.17
HPS4-207ENST00000459918 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
HPS4-207ENST00000459918 KIAA0586Q9BVV6 1533 aa13.95□□□□□ -0.18
HPS4-207ENST00000459918 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
HPS4-207ENST00000459918 PTPRGP23470 1445 aa13.9□□□□□ -0.19
HPS4-207ENST00000459918 CARMIL2Q6F5E8 1435 aa13.9□□□□□ -0.19
HPS4-207ENST00000459918 KDM4FA0A1W2PPD8 638 aa13.89□□□□□ -0.19
HPS4-207ENST00000459918 IQGAP2Q13576 1575 aa13.86□□□□□ -0.19
HPS4-207ENST00000459918 ABCC2Q92887 1545 aa13.85□□□□□ -0.19
HPS4-207ENST00000459918 IGF1RP08069 1367 aa13.85□□□□□ -0.19
HPS4-207ENST00000459918 ASXL2Q76L83 1435 aa13.84□□□□□ -0.19
HPS4-207ENST00000459918 PPRC1Q5VV67 1664 aaKnown RBP13.84□□□□□ -0.19
HPS4-207ENST00000459918 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.19
HPS4-207ENST00000459918 ADGRL1O94910 1474 aa13.83□□□□□ -0.2
HPS4-207ENST00000459918 PLB1Q6P1J6 1458 aa13.83□□□□□ -0.2
HPS4-207ENST00000459918 CARMIL1Q5VZK9 1371 aa13.82□□□□□ -0.2
HPS4-207ENST00000459918 GLI2P10070 1586 aa13.81□□□□□ -0.2
HPS4-207ENST00000459918 ZCCHC11Q5TAX3 1644 aaKnown RBP13.79□□□□□ -0.2
HPS4-207ENST00000459918 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
HPS4-207ENST00000459918 UACAQ9BZF9 1416 aa13.78□□□□□ -0.2
HPS4-207ENST00000459918 TEX14Q8IWB6 1497 aa13.78□□□□□ -0.2
HPS4-207ENST00000459918 MAP3K4Q9Y6R4 1608 aa13.78□□□□□ -0.2
HPS4-207ENST00000459918 UHRF1BP1LA0JNW5 1464 aa13.76□□□□□ -0.21
HPS4-207ENST00000459918 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
HPS4-207ENST00000459918 HECW2Q9P2P5 1572 aa13.74□□□□□ -0.21
HPS4-207ENST00000459918 KIAA0556O60303 1618 aa13.73□□□□□ -0.21
HPS4-207ENST00000459918 DISP1Q96F81 1524 aa13.73□□□□□ -0.21
HPS4-207ENST00000459918 KDM5BQ9UGL1 1544 aa13.71□□□□□ -0.21
HPS4-207ENST00000459918 CTTNBP2Q8WZ74 1663 aa13.71□□□□□ -0.21
HPS4-207ENST00000459918 RAPGEF2Q9Y4G8 1499 aa13.69□□□□□ -0.22
HPS4-207ENST00000459918 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
HPS4-207ENST00000459918 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
HPS4-207ENST00000459918 WDR7Q9Y4E6 1490 aa13.67□□□□□ -0.22
HPS4-207ENST00000459918 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
HPS4-207ENST00000459918 KIF21BO75037 1637 aa13.64□□□□□ -0.23
HPS4-207ENST00000459918 KCNH8Q96L42 1107 aa13.63□□□□□ -0.23
HPS4-207ENST00000459918 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
HPS4-207ENST00000459918 CD109Q6YHK3 1445 aa13.62□□□□□ -0.23
HPS4-207ENST00000459918 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
HPS4-207ENST00000459918 MAGI3Q5TCQ9 1506 aa13.58□□□□□ -0.24
HPS4-207ENST00000459918 ABCA8O94911 1581 aa13.57□□□□□ -0.24
HPS4-207ENST00000459918 ARID3CA6NKF2 412 aa13.56□□□□□ -0.24
HPS4-207ENST00000459918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.49□□□□□ -0.25
HPS4-207ENST00000459918 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
HPS4-207ENST00000459918 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
HPS4-207ENST00000459918 ARAP3Q8WWN8 1544 aa13.48□□□□□ -0.25
HPS4-207ENST00000459918 ABCA9Q8IUA7 1624 aa13.47□□□□□ -0.25
HPS4-207ENST00000459918 ARID4BQ4LE39 1312 aaPredicted RBP13.47□□□□□ -0.25
HPS4-207ENST00000459918 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
HPS4-207ENST00000459918 PTPRMP28827 1452 aa13.45□□□□□ -0.26
HPS4-207ENST00000459918 FBXO41Q8TF61 875 aa13.45□□□□□ -0.26
HPS4-207ENST00000459918 RAPGEF6Q8TEU7 1601 aa13.45□□□□□ -0.26
HPS4-207ENST00000459918 MADDQ8WXG6 1647 aa13.44□□□□□ -0.26
HPS4-207ENST00000459918 BCORL1Q5H9F3 1711 aa13.44□□□□□ -0.26
HPS4-207ENST00000459918 ATP10BO94823 1461 aa13.42□□□□□ -0.26
HPS4-207ENST00000459918 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
HPS4-207ENST00000459918 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
HPS4-207ENST00000459918 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
HPS4-207ENST00000459918 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
HPS4-207ENST00000459918 RANGAP1P46060 587 aaPredicted RBP13.41□□□□□ -0.26
HPS4-207ENST00000459918 NEO1Q92859 1461 aa13.41□□□□□ -0.26
HPS4-207ENST00000459918 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
HPS4-207ENST00000459918 SAMD9Q5K651 1589 aa13.4□□□□□ -0.26
HPS4-207ENST00000459918 FRMPD1Q5SYB0 1578 aa13.38□□□□□ -0.27
HPS4-207ENST00000459918 CFAP74Q9C0B2 1584 aa13.38□□□□□ -0.27
HPS4-207ENST00000459918 ARHGEF40Q8TER5 1519 aa13.38□□□□□ -0.27
HPS4-207ENST00000459918 RICTORQ6R327 1708 aa13.35□□□□□ -0.27
HPS4-207ENST00000459918 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
HPS4-207ENST00000459918 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
HPS4-207ENST00000459918 FANCAO15360 1455 aa13.33□□□□□ -0.28
HPS4-207ENST00000459918 DENND4BO75064 1496 aaPredicted RBP13.33□□□□□ -0.28
HPS4-207ENST00000459918 FER1L4A9Z1Z3 1794 aa13.32□□□□□ -0.28
HPS4-207ENST00000459918 NUP153P49790 1475 aaKnown RBP13.32□□□□□ -0.28
HPS4-207ENST00000459918 ZFYVE16Q7Z3T8 1539 aa13.31□□□□□ -0.28
HPS4-207ENST00000459918 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
HPS4-207ENST00000459918 EFCAB5A4FU69 1503 aa13.3□□□□□ -0.28
HPS4-207ENST00000459918 PLEKHD1A6NEE1 506 aa13.3□□□□□ -0.28
HPS4-207ENST00000459918 AKNAQ7Z591 1439 aa13.3□□□□□ -0.28
HPS4-207ENST00000459918 TTC37Q6PGP7 1564 aa13.29□□□□□ -0.28
HPS4-207ENST00000459918 HSPA2P54652 639 aa13.29□□□□□ -0.28
HPS4-207ENST00000459918 MLECQ14165 292 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms